ggKbase home page

DolJOral78_scaffold_2660

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2660_1
Spongiibacter sp. IMCC21906, Spongiibacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..307)
DNA (306bp) protein (102aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RHC2_DESPD
NADPH-dependent glutamate synthase beta chain-like oxidoreductase {ECO:0000313|EMBL:AKH69136.1}; TaxID=1620392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
DolJOral78_scaffold_2660_2
unknown

Not on your lists

comp(656..880)
DNA (225bp) protein (75aa)

This feature has no annotations

DolJOral78_scaffold_2660_3
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1384..2355
DNA (972bp) protein (324aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B52BD1
bcsP31; 31 kDa immunogenic protein
31 kDa immunogenic protein {ECO:0000313|EMBL:AFP31025.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter s
DolJOral78_scaffold_2660_4
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2356..2829
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3BDAB
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
hypothetical protein
DolJOral78_scaffold_2660_5
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2882..5143
DNA (2262bp) protein (754aa)
transporter n=1 Tax=Desulfospira joergensenii RepID=UPI0003B73F90
Transporter {ECO:0000313|EMBL:EAQ24039.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 217.;"
transporter
DolJOral78_scaffold_2660_6
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5549..6178)
DNA (630bp) protein (210aa)
Zn-dependent protease n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NFF9_DESSD rbh
Zn-dependent protease
Zn-dependent protease {ECO:0000313|EMBL:AGF78399.1}; Flags: Precursor;; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" sourc
DolJOral78_scaffold_2660_7
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6183..8927)
DNA (2745bp) protein (915aa)
tRNA nucleotidyltransferase/poly(A) polymerase Tax=GWB2_Desulfobacterales_56_26_curated
Polynucleotide adenylyltransferase region id=1820174 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
tRNA nucleotidyltransferase/poly(A) polymerase
DolJOral78_scaffold_2660_8
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9313..9795)
DNA (483bp) protein (161aa)
Tyrosine recombinase XerD id=1820172 bin=GWB2_Desulfobacterales_56_26 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
tyrosine recombinase XerD; K04763 integrase/recombinase XerD Tax=GWB2_Desulfobacterales_56_26_curated
site-specific recombinase XerD
DolJOral78_scaffold_2660_9
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10398..10592)
DNA (195bp) protein (65aa)
30S ribosomal protein S21 id=1820170 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
SSU ribosomal protein S21P Tax=GWB2_Desulfobacterales_56_26_curated
SSU ribosomal protein S21P
DolJOral78_scaffold_2660_10
unknown

Not on your lists

comp(10888..11478)
DNA (591bp) protein (197aa)

This feature has no annotations

DolJOral78_scaffold_2660_11

Not on your lists

11874..12809
DNA (936bp) protein (312aa)
D-alanine--D-alanine ligase (EC:6.3.2.4)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K1YE47_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD35586.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DolJOral78_scaffold_2660_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12850..13374
DNA (525bp) protein (175aa)
Related to molybdopterin-guanine dinucleotide biosynthesis protein B id=1820151 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
molybdopterin-guanine dinucleotide biosynthesis protein B Tax=GWB2_Desulfobacterales_56_26_curated
molybdopterin-guanine dinucleotide biosynthesis protein B
DolJOral78_scaffold_2660_13
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13468..14745)
DNA (1278bp) protein (426aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
Serine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1YDU7_9BACT
DolJOral78_scaffold_2660_14
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15004..15756
DNA (753bp) protein (251aa)
Sec-independent protein secretion pathway component TatC n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NFI0_DESSD
Sec-independent protein translocase protein TatC {ECO:0000256|HAMAP-Rule:MF_00902}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source=
Sec-independent protein secretion pathway component TatC
DolJOral78_scaffold_2660_15
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15802..16221)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PFG6_DESSD
Uncharacterized protein {ECO:0000313|EMBL:KJS01950.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
hypothetical protein
DolJOral78_scaffold_2660_16
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16234..16575
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZC47_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KJS01949.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
septum formation initiator
DolJOral78_scaffold_2660_17
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16712..16927)
DNA (216bp) protein (72aa)
Putative uncharacterized protein id=2290701 bin=GWB2_Desulfobacterales_56_26 species=delta proteobacterium MLMS-1 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
Putative uncharacterized protein Tax=GWB2_Desulfobacterales_56_26_curated
FmdB family regulatory protein
DolJOral78_scaffold_2660_18
Aliivibrio wodanis, Aliivibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17239..18096
DNA (858bp) protein (286aa)
nfo; endonuclease IV (EC:3.1.21.2)
Probable endonuclease 4 {ECO:0000256|HAMAP-Rule:MF_00152}; EC=3.1.21.2 {ECO:0000256|HAMAP-Rule:MF_00152};; Endodeoxyribonuclease IV {ECO:0000256|HAMAP-Rule:MF_00152}; Endonuclease IV {ECO:0000256|HAMA
endonuclease n=1 Tax=Aliivibrio logei RepID=UPI00031A2128
Displaying 18 items

View Taxonomy