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DolJOral78_scaffold_3844

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_3844_1
Shewanella baltica, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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171..1289
DNA (1119bp) protein (373aa)
Diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(S) n=1 Tax=Shewanella baltica (strain OS185) RepID=A6WTK7_SHEB8
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:AEG09654.1}; TaxID=693974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewan
DolJOral78_scaffold_3844_2
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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1663..3348
DNA (1686bp) protein (562aa)
Acyl-CoA dehydrogenase n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK42_9GAMM rbh
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:CBL45184.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
DolJOral78_scaffold_3844_3
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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3596..5614
DNA (2019bp) protein (673aa)
Methylmalonyl-CoA mutase, alpha subunit n=1 Tax=gamma proteobacterium HdN1 RepID=E1VK40_9GAMM rbh
smbA; methylmalonyl-CoA mutase subunit alpha
Methylmalonyl-CoA mutase, alpha subunit {ECO:0000313|EMBL:CBL45182.1}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
DolJOral78_scaffold_3844_4
Leptospira yanagawae, Leptospira, Spirochaetia, Spirochaetes, Bacteria

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5689..6678
DNA (990bp) protein (330aa)
Putative LAO/AO transport system ATPase n=1 Tax=Leptospira yanagawae serovar Saopaulo str. Sao Paulo = ATCC 700523 RepID=R8ZLR0_9LEPT
Putative LAO/AO transport system ATPase {ECO:0000313|EMBL:EOQ86949.1}; TaxID=1249483 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira yanagawae serovar
argK; periplasmic kinase
DolJOral78_scaffold_3844_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

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6707..7957
DNA (1251bp) protein (417aa)
Crotonyl-CoA carboxylase/reductase, ethylmalonyl-CoA producing n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HLQ4_9PROT
Putative crotonyl-CoA reductase {ECO:0000313|EMBL:CDH47788.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus
crotonyl-CoA reductase
DolJOral78_scaffold_3844_6
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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8209..8691
DNA (483bp) protein (161aa)
Response regulator n=1 Tax=Photobacterium sp. AK15 RepID=L8JBL8_9GAMM
Response regulator {ECO:0000313|EMBL:ELR64959.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK15.;"
response regulator
DolJOral78_scaffold_3844_7
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8847..10253
DNA (1407bp) protein (469aa)
dihydroorotate dehydrogenase n=1 Tax=Aliivibrio logei RepID=UPI0003028328
Di- and tricarboxylate transporter
Di-and tricarboxylate transporter {ECO:0000313|EMBL:AJQ92389.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillales; Gynuella.;" so
DolJOral78_scaffold_3844_8
Photobacterium gaetbulicola, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10250..12223
DNA (1974bp) protein (658aa)
Putative response regulator n=1 Tax=Photobacterium profundum 3TCK RepID=Q1Z0X8_PHOPR rbh
putative response regulator
Putative response regulator {ECO:0000313|EMBL:AJR09255.1}; TaxID=658445 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium gaet
DolJOral78_scaffold_3844_9
Streptomyces rimosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12381..12755)
DNA (375bp) protein (125aa)
UPI0003D658F3 related cluster n=1 Tax=unknown RepID=UPI0003D658F3
Histone-like DNA-binding protein {ECO:0000313|EMBL:ELQ79576.1}; TaxID=1265868 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces rimosus subsp
histone family protein DNA-binding protein
DolJOral78_scaffold_3844_10
Paraglaciecola psychrophila, Paraglaciecola, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13217..13642)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Glaciecola psychrophila 170 RepID=K7AP75_9ALTE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGH44610.1}; TaxID=1129794 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Paraglaciecola.;" source="Paraglaciecola
DolJOral78_scaffold_3844_11
Legionella pneumophila, Legionella, Legionellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13898..14248)
DNA (351bp) protein (117aa)
Transposase ISSod6 n=4 Tax=Legionella pneumophila RepID=U0E5N1_LEGPN
Transposase DDE domain protein {ECO:0000313|EMBL:GAN27422.1}; TaxID=446 species="Bacteria; Proteobacteria; Gammaproteobacteria; Legionellales; Legionellaceae; Legionella.;" source="Legionella pneumoph
transposase
Displaying 11 items

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