ggKbase home page

DolJOral78_scaffold_270

Search features with annotation key words

Displaying items 1-30 of 91 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_270_1
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(59..2026)
DNA (1968bp) protein (656aa)
peptidase C14 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B751DA rbh
hypothetical protein
Conserved uncharacterized protein, DUF323 {ECO:0000313|EMBL:CCK80702.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" so
DolJOral78_scaffold_270_2
Lentisphaera araneosa, Lentisphaera, Lentisphaerales, Lentisphaeria, Lentisphaerae, Bacteria

Not on your lists

comp(2202..2504)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Lentisphaera araneosa HTCC2155 RepID=A6DRJ9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EDM27362.1}; TaxID=313628 species="Bacteria; Lentisphaerae; Lentisphaeria; Lentisphaerales; Lentisphaeraceae; Lentisphaera.;" source="Lentisphaera araneosa HT
DolJOral78_scaffold_270_3
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2737..2925
DNA (189bp) protein (63aa)
Uncharacterized protein {ECO:0000313|EMBL:EOS15087.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV
DolJOral78_scaffold_270_4
bacterium UASB270, Bacteria

Not on your lists

comp(3170..3772)
DNA (603bp) protein (201aa)
Conserved uncharacterized protein, DUF323 n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NPD8_DESTT
Uncharacterized protein {ECO:0000313|EMBL:GAK59825.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
hypothetical protein
DolJOral78_scaffold_270_5
RBG_13_OP8X_37_8_curated, OP8X, Bacteria

Not on your lists

comp(3744..5126)
DNA (1383bp) protein (461aa)
serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_13_OP8X_37_8_curated
peptidase C14 n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B751DA
peptidase C14 caspase catalytic subunit p20
DolJOral78_scaffold_270_6
Desulfovibrio sp. 6_1_46AFAA, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5317..6246)
DNA (930bp) protein (310aa)
Flagellar motor switch protein FliG n=2 Tax=Desulfovibrio RepID=D9YCK9_9DELT
Flagellar motor switch protein FliG {ECO:0000313|EMBL:EGW51544.1}; TaxID=665942 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source
Flagellar motor switch protein FliG
DolJOral78_scaffold_270_7
unknown

Not on your lists

comp(6270..6650)
DNA (381bp) protein (127aa)

This feature has no annotations

DolJOral78_scaffold_270_8
unknown

Not on your lists

6801..7499
DNA (699bp) protein (233aa)

This feature has no annotations

DolJOral78_scaffold_270_9
Desulfovibrio desulfuricans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7432..8436)
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Oceanimonas smirnovii RepID=UPI0003750570
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGB15657.1}; TaxID=641491 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
DolJOral78_scaffold_270_10
unknown

Not on your lists

comp(8433..8633)
DNA (201bp) protein (67aa)

This feature has no annotations

DolJOral78_scaffold_270_11
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8816..11245)
DNA (2430bp) protein (810aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SQQ1_9DELT rbh
DolJOral78_scaffold_270_12
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11340..12041)
DNA (702bp) protein (234aa)
DNA repair protein RadC n=1 Tax=Desulfovibrio africanus str. Walvis Bay RepID=F3YXV8_DESAF
DNA repair protein RadC
DNA repair protein RadC {ECO:0000313|EMBL:EGJ50660.1}; TaxID=690850 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovib
DolJOral78_scaffold_270_13
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12088..13065)
DNA (978bp) protein (326aa)
DNA polymerase III delta n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2R7_DESRD
DNA polymerase III delta
DNA polymerase III delta {ECO:0000313|EMBL:ACV68714.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" source="Desulfoh
DolJOral78_scaffold_270_14
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13197..13700)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSH2_DESBD
hypothetical protein
Tax=BJP_08E140C01_Desulfomicrobium_58_14
DolJOral78_scaffold_270_15
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13684..16185)
DNA (2502bp) protein (834aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=526222 species="Bacteria; Proteob
Leucine--tRNA ligase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BYC5_DESAD rbh
leucyl-tRNA synthetase
DolJOral78_scaffold_270_16
Aggregatibacter sp. oral taxon 458, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16207..16761)
DNA (555bp) protein (185aa)
Fic family protein n=1 Tax=Aggregatibacter sp. oral taxon 458 str. W10330 RepID=U1S7N4_9PAST
Fic family protein {ECO:0000313|EMBL:ERH27908.1}; TaxID=1321772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source="Aggregatibacter sp.
sodium/panthothenate symporter
DolJOral78_scaffold_270_17
Desulfonatronospira thiodismutans, Desulfonatronospira, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16780..17220)
DNA (441bp) protein (147aa)
N utilization substance protein B homolog n=1 Tax=Desulfonatronospira thiodismutans ASO3-1 RepID=D6SQQ8_9DELT
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=555779 species="Bacteria; Prote
NusB antitermination factor
DolJOral78_scaffold_270_18
Desulfovibrio magneticus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17224..17694)
DNA (471bp) protein (157aa)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Desulfovibrio magneticus str. Maddingley MBC34 RepID=K6GKY0_9DELT
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
putative 6,7-dimethyl-8-ribityllumazine synthase
DolJOral78_scaffold_270_19
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17736..18992)
DNA (1257bp) protein (419aa)
Riboflavin biosynthesis protein RibBA n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X2R2_DESRD rbh
GTP cyclohydrolase II
Riboflavin biosynthesis protein RibBA {ECO:0000256|HAMAP-Rule:MF_01283, ECO:0000256|SAAS:SAAS00280052}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfo
DolJOral78_scaffold_270_20
BJP_IG2158_Methylococcales_50_91, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19260..19853)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYS0_META2
hypothetical protein
Tax=BJP_IG2158_Methylococcales_50_91
DolJOral78_scaffold_270_21
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20076..20738)
DNA (663bp) protein (221aa)
riboflavin synthase subunit alpha (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BYC9_DESAD
Tax=BJP_IG2102_Desulfovibrionales_64_25
DolJOral78_scaffold_270_22
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20711..21880)
DNA (1170bp) protein (390aa)
Riboflavin biosynthesis protein RibD n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSH8_DESBD rbh
riboflavin biosynthesis protein RibD
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrobiaceae; Desulfomicrobium.;"
DolJOral78_scaffold_270_23
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21883..22368)
DNA (486bp) protein (162aa)
CMP/dCMP deaminase zinc-binding n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSH9_DESBD
zinc-binding CMP/dCMP deaminase
Tax=BJP_08E140C01_Desulfomicrobium_58_14
DolJOral78_scaffold_270_24
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22458..23696)
DNA (1239bp) protein (413aa)
glycine hydroxymethyltransferase (EC:2.1.2.1)
Serine hydroxymethyltransferase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LSI0_DESBD rbh
Tax=BJP_08E140C01_Desulfomicrobium_58_14
DolJOral78_scaffold_270_25
Alistipes sp. CAG:435, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24279..25952
DNA (1674bp) protein (558aa)
YidE/YbjL duplication n=1 Tax=Alistipes sp. CAG:435 RepID=R6XDL8_9BACT rbh
YidE/YbjL duplication {ECO:0000313|EMBL:CDD19650.1}; TaxID=1262695 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp
putative transporter PG_1411
DolJOral78_scaffold_270_26
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26314..27831
DNA (1518bp) protein (506aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPX4_DESBD rbh
lysyl-tRNA synthetase
DolJOral78_scaffold_270_27
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27880..29109
DNA (1230bp) protein (410aa)
Lipoprotein releasing system, transmembrane protein, LolC/E family n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPX3_DESBD rbh
lipoprotein releasing system transmembrane protein LolC/E family
Lipoprotein releasing system, transmembrane protein, LolC/E family {ECO:0000313|EMBL:ACU91455.1}; TaxID=525897 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfomicrob
DolJOral78_scaffold_270_28
Bilophila sp. 4_1_30, Bilophila, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29102..29782
DNA (681bp) protein (227aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708};; TaxID=693988 species="Bacteria; Proteobacteria; Deltaproteobacte
Lipoprotein-releasing system ATP-binding protein LolD n=2 Tax=Bilophila RepID=E5Y9N0_BILWA
ABC transporter
DolJOral78_scaffold_270_29
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29772..32456
DNA (2685bp) protein (895aa)
Outer membrane protein assembly factor BamA n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X518_DESRD rbh
outer membrane protein assembly complex, YaeT protein
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; De
DolJOral78_scaffold_270_30
BJP_08E140C01_Desulfomicrobium_58_14, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32532..33071
DNA (540bp) protein (180aa)
Outer membrane chaperone Skp (OmpH) n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LPX0_DESBD
outer membrane chaperone Skp
Tax=BJP_08E140C01_Desulfomicrobium_58_14
Displaying items 1-30 of 91 in total

View Taxonomy