ggKbase home page

DolJOral78_scaffold_43655

Search features with annotation key words

Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_43655_1
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3..1076
DNA (1074bp) protein (358aa)
Signal recognition particle protein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1NJW0_DESSD
signal recognition particle subunit FFH/SRP54 (srp54)
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desul
DolJOral78_scaffold_43655_2
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1217..1462
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RS16_DESPS
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfota
DolJOral78_scaffold_43655_3
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1469..1699
DNA (231bp) protein (77aa)
UPF0109 protein DP2801 id=2172929 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
putative RNA-binding protein (contains KH domain) Tax=GWB2_Desulfobacterales_56_26_curated
RNA-binding protein
DolJOral78_scaffold_43655_4
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1716..2276
DNA (561bp) protein (187aa)
Related to 16S rRNA processing protein RimM id=2172924 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
16S rRNA processing protein RimM Tax=GWB2_Desulfobacterales_56_26_curated
16S rRNA processing protein RimM
DolJOral78_scaffold_43655_5
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2276..2413
DNA (138bp) protein (46aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1P8S3_DESSD
tRNA (guanine-N1)-methyltransferase
Displaying 5 items

View Taxonomy