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DolJOral78_scaffold_1323

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1323_1
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..99
DNA (99bp) protein (33aa)
tuf; elongation factor Tu (EC:3.6.5.3)
Elongation factor Tu 1 n=2 Tax=Myxococcus xanthus RepID=EFTU1_MYXXD
Elongation factor Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118}; Short=EF-Tu 1 {ECO:0000255|HAMAP-Rule:MF_00118};; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobact
DolJOral78_scaffold_1323_2
bacterium UASB270, Bacteria

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332..640
DNA (309bp) protein (103aa)
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 id=3967650 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
DolJOral78_scaffold_1323_3
bacterium UASB270, Bacteria

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707..1342
DNA (636bp) protein (212aa)
50S ribosomal protein L4 n=1 Tax=Butyrivibrio sp. CAG:318 RepID=R6QVE7_9FIRM
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rplD; 50S ribosomal protein L4
DolJOral78_scaffold_1323_4
bacterium UASB270, Bacteria

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1339..1623
DNA (285bp) protein (95aa)
50S ribosomal protein L23 n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MK34_9BACT
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rplW; 50S ribosomal protein L23
DolJOral78_scaffold_1323_5
bacterium UASB270, Bacteria

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1693..2523
DNA (831bp) protein (277aa)
50S ribosomal protein L2 n=1 Tax=Geobacter sulfurreducens (strain DL-1 / KN400) RepID=D7AMT7_GEOSK
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rplB; 50S ribosomal protein L2
Novel Jill Banfield (4/7/15)
DolJOral78_scaffold_1323_6
bacterium UASB270, Bacteria

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2618..2896
DNA (279bp) protein (93aa)
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
30S ribosomal protein S19 id=3967640 bin=GWF2_Nitrospirae_44_13 species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
30S ribosomal protein S19
DolJOral78_scaffold_1323_7
bacterium UASB270, Bacteria

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2934..3275
DNA (342bp) protein (114aa)
50S ribosomal protein L22 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=RL22_ALKOO
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rplV; 50S ribosomal protein L22
DolJOral78_scaffold_1323_8
bacterium UASB270, Bacteria

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3370..4017
DNA (648bp) protein (216aa)
30S ribosomal protein S3 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RS3_GEODF
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rpsC; 30S ribosomal protein S3
DolJOral78_scaffold_1323_9
bacterium UASB270, Bacteria

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4154..4570
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B58DAB
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
50S ribosomal protein L16
DolJOral78_scaffold_1323_10
bacterium UASB270, Bacteria

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4570..4764
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDQ7_9FIRM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
50S ribosomal protein L29
DolJOral78_scaffold_1323_11
bacterium UASB14, Bacteria

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4851..5114
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LSU4_TEPAE
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
rpsQ; ribosomal protein S17 (BS16)
DolJOral78_scaffold_1323_12
bacterium UASB270, Bacteria

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5163..5531
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Collinsella RepID=B6G992_9ACTN
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
50S ribosomal protein L14
DolJOral78_scaffold_1323_13
bacterium UASB14, Bacteria

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5561..5890
DNA (330bp) protein (110aa)
50S ribosomal protein L24 n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K4L2_HALHC
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
ribosomal protein L24, bacterial/organelle
DolJOral78_scaffold_1323_14
bacterium UASB14, Bacteria

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5927..6475
DNA (549bp) protein (183aa)
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
50S ribosomal protein L5 id=4417657 bin=GWC2_Syntrophobacterales_56_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophobacterales_56_13 organism_group=Deltaproteobacteria organism_desc=Good +
rplE; 50S ribosomal protein L5
DolJOral78_scaffold_1323_15
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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6508..6693
DNA (186bp) protein (62aa)
30S ribosomal protein S14 type Z n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKI1_9BACT
30S ribosomal protein S14 type Z Tax=S_Thermacetogenium_phaeum_55_64
rpsZ; 30S ribosomal protein S14
DolJOral78_scaffold_1323_16
bacterium UASB270, Bacteria

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6818..7204
DNA (387bp) protein (129aa)
30S ribosomal protein S8 n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=RS8_HALOH
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
30S ribosomal protein S8
DolJOral78_scaffold_1323_17
bacterium UASB270, Bacteria

Not on your lists


7269..7805
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Clostridium sp. CAG:230 RepID=R6E5E2_9CLOT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
50S ribosomal protein L6
DolJOral78_scaffold_1323_18
bacterium UASB14, Bacteria

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7863..8231
DNA (369bp) protein (123aa)
50S ribosomal protein L18 n=2 Tax=Selenomonas RepID=C4V6D9_9FIRM
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
50S ribosomal protein L18
DolJOral78_scaffold_1323_19
bacterium UASB270, Bacteria

Not on your lists


8259..8771
DNA (513bp) protein (171aa)
30S ribosomal protein S5 n=1 Tax=Desulfobacca acetoxidans (strain ATCC 700848 / DSM 11109 / ASRB2) RepID=F2NJC2_DESAR
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
30S ribosomal protein S5
DolJOral78_scaffold_1323_20
bacterium UASB14, Bacteria

Not on your lists


8804..8995
DNA (192bp) protein (64aa)
50S ribosomal protein L30 {ECO:0000256|SAAS:SAAS00032272}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
50S ribosomal protein L30 id=4795538 bin=GWC2_Nitrospirae-rel_56_14 species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
50S ribosomal protein L30
DolJOral78_scaffold_1323_21
bacterium UASB270, Bacteria

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9080..9526
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CPY3_THEYO
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rplO; 50S ribosomal protein L15
DolJOral78_scaffold_1323_22
bacterium UASB14, Bacteria

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9577..10884
DNA (1308bp) protein (436aa)
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
Protein translocase subunit SecY id=4716762 bin=GWC2_Methylomirabilis_70_16 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
secY; preprotein translocase subunit SecY
DolJOral78_scaffold_1323_23
bacterium UASB14, Bacteria

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10933..11151
DNA (219bp) protein (73aa)
translation initiation factor IF-1 n=1 Tax=Paenibacillus sp. JC66 RepID=UPI000288F187
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
infA; translation initiation factor IF-1
DolJOral78_scaffold_1323_24
bacterium UASB270, Bacteria

Not on your lists


11473..11853
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Caloramator australicus RC3 RepID=I7LGH4_9CLOT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
30S ribosomal protein S13
DolJOral78_scaffold_1323_25
bacterium UASB270, Bacteria

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11965..12366
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WS73_KYRT2
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
30S ribosomal protein S11
DolJOral78_scaffold_1323_26
bacterium UASB270, Bacteria

Not on your lists


12506..13162
DNA (657bp) protein (219aa)
30S ribosomal protein S4 n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=RS4_GEODF
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rpsD; 30S ribosomal protein S4
DolJOral78_scaffold_1323_27
bacterium UASB270, Bacteria

Not on your lists

13277..14296
DNA (1020bp) protein (340aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1JXZ7_DESAC
DNA-directed RNA polymerase subunit alpha
DolJOral78_scaffold_1323_28
bacterium UASB270, Bacteria

Not on your lists


14353..14709
DNA (357bp) protein (119aa)
50S ribosomal protein L17 n=1 Tax=delta proteobacterium NaphS2 RepID=D8EWL8_9DELT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
rplQ; 50S ribosomal protein L17 RplQ
DolJOral78_scaffold_1323_29
bacterium UASB14, Bacteria

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comp(14892..15794)
DNA (903bp) protein (301aa)
Putative uncharacterized protein n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QCK2_DESAH
Uncharacterized protein {ECO:0000313|EMBL:GAK54348.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
hypothetical protein
DolJOral78_scaffold_1323_30
bacterium UASB270, Bacteria

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16460..17101
DNA (642bp) protein (214aa)
Uncharacterized protein {ECO:0000313|EMBL:GAK59029.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
Displaying items 1-30 of 41 in total

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