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DolJOral78_scaffold_1738

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Displaying items 1-30 of 34 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1738_1
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..135
DNA (135bp) protein (45aa)
ABC transporter n=1 Tax=Streptococcus agalactiae GB00555 RepID=S8VYN5_STRAG
ABC transporter, ATP-binding/permease protein
ABC transporter {ECO:0000313|EMBL:KGF07032.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11
DolJOral78_scaffold_1738_2
unknown

Not on your lists

comp(157..450)
DNA (294bp) protein (98aa)

This feature has no annotations

DolJOral78_scaffold_1738_3
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1339..2028
DNA (690bp) protein (230aa)
Aquaporin Z n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U1J5_DESML
Aquaporin Z {ECO:0000256|HAMAP-Rule:MF_01146}; Flags: Precursor;; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="
MIP family channel protein
DolJOral78_scaffold_1738_4
RBG_16_Planctomycetes_64_10_curated, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(2584..3465)
DNA (882bp) protein (294aa)
FG-GAP repeat protein n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EGP8_THECK
exported protein of unknown function Tax=RBG_16_Planctomycetes_64_10_curated
FG-GAP repeat-containing protein
DolJOral78_scaffold_1738_5
RBG_13_WOR_3_43_14_curated, WOR-3, Bacteria

Not on your lists

comp(3493..3780)
DNA (288bp) protein (96aa)
hypothetical protein Tax=RBG_13_WOR_3_43_14_curated
DolJOral78_scaffold_1738_6
Saimiriine herpesvirus 2, Rhadinovirus, Herpesvirales, Viruses

Not on your lists

comp(3879..4241)
DNA (363bp) protein (121aa)
Transcriptional regulator ICP22 homolog n=1 Tax=Saimiriine herpesvirus 2 (strain 11) RepID=ICP22_SHV21
Transcriptional regulator ICP22 homolog; Immediate-early protein; TaxID=10383 species="Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; Gammaherpesvirinae; Rhadinovirus.;" source="S
hypothetical protein
DolJOral78_scaffold_1738_7
Tumebacillus flagellatus, Tumebacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4359..5267)
DNA (909bp) protein (303aa)
Ribonuclease {ECO:0000256|RuleBase:RU003515}; EC=3.1.26.- {ECO:0000256|RuleBase:RU003515};; TaxID=1157490 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Tumebacillus.;" sourc
rnhC; ribonuclease HIII (EC:3.1.26.4); K03471 ribonuclease HIII [EC:3.1.26.4] id=125303 bin=ACD79 species=ACD79 genus=ACD79 taxon_order=ACD79 taxon_class=ACD79 phylum=Clamydiae tax=ACD79 organism_group=Chlamydiae organism_desc=Novel, branching deeply from Chlamydiae
ribonuclease HIII
DolJOral78_scaffold_1738_8
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists

comp(5267..6073)
DNA (807bp) protein (269aa)
hypothetical protein id=7201402 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
hypothetical protein
Tax=BJP_IG2158_Zixibacteria_48_33
DolJOral78_scaffold_1738_9
RIFOXYB2_FULL_RIF07_49_35_curated, RIF7, Bacteria

Not on your lists

comp(6114..7133)
DNA (1020bp) protein (340aa)
group 1 glycosyl transferase Tax=RIFOXYB2_FULL_RIF07_49_35_curated
Glycosyl transferase group 1 id=1250593 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
group 1 glycosyl transferase
DolJOral78_scaffold_1738_10
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

7244..8371
DNA (1128bp) protein (376aa)
class I and II aminotransferase Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
class I/II aminotransferase id=5094847 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
aminotransferase
DolJOral78_scaffold_1738_11
RBG_13_RIF03_48_7_curated, RIF3, Bacteria

Not on your lists

comp(8358..8882)
DNA (525bp) protein (175aa)
GTP-binding protein n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B356DF
GTP-binding protein Tax=RBG_13_RIF03_48_7_curated
hypothetical protein
DolJOral78_scaffold_1738_12
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(8882..9664)
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Marinimicrobia bacterium JGI 0000039-D08 RepID=UPI0003A2D2F8
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
DolJOral78_scaffold_1738_13
R_Deltaproteobacteria_47_10, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9685..10632
DNA (948bp) protein (316aa)
yhcC-1; radical SAM domain iron-sulfur cluster-binding oxidoreductase; K07139 Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_47_10_curated
Radical SAM domain iron-sulfur cluster-binding oxidoreductase, TIGR01212 family id=1954730 bin=GWD2_Deltaproteobacteria_55_8 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
iron-sulfur protein
DolJOral78_scaffold_1738_14
BJP_IG2157_Anaerolineales_55_23, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(10684..11121)
DNA (438bp) protein (146aa)
Putative uncharacterized protein id=3881090 bin=GWF2_Melioribacter_38_21 species=[Eubacterium] biforme genus=unknown taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
Tax=BJP_IG2157_Anaerolineales_55_23
DolJOral78_scaffold_1738_15
Peptococcaceae bacterium BRH_c8a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11317..12819
DNA (1503bp) protein (501aa)
Asparagine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00534}; EC=6.1.1.22 {ECO:0000256|HAMAP-Rule:MF_00534};; Asparaginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00534}; TaxID=1629715 species="Bacteri
asnS; asparaginyl-tRNA synthetase AsnS (EC:6.1.1.22)
Asparagine--tRNA ligase id=4340259 bin=GWF2_Bacteroidetes_41_61 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_61 organism_group=Bacteroidetes organism_desc=a118
DolJOral78_scaffold_1738_16
RIFOXYB2_FULL_WOR_2_38_16_curated, WOR-2, Bacteria

Not on your lists

12846..16379
DNA (3534bp) protein (1178aa)
pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; K03737 putative pyruvate-flavodoxin oxidoreductase [EC:1.2.7.-] Tax=RIFOXYB2_FULL_WOR_2_38_16_curated
Pyruvate-flavodoxin oxidoreductase id=4114759 bin=GWF2_OP3_38_59 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
pyruvate:ferredoxin oxidoreductase subunit alpha
DolJOral78_scaffold_1738_17
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16422..17660)
DNA (1239bp) protein (413aa)
Membrane protein, putative n=1 Tax=Pseudomonas aeruginosa (strain PA7) RepID=A6VES6_PSEA7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF33635.1}; TaxID=1262663 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas aerug
DolJOral78_scaffold_1738_18
unknown

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17703..18137
DNA (435bp) protein (145aa)

This feature has no annotations

DolJOral78_scaffold_1738_19
unknown

Not on your lists

comp(18134..18562)
DNA (429bp) protein (143aa)

This feature has no annotations

DolJOral78_scaffold_1738_20

Not on your lists

comp(18716..20431)
DNA (1716bp) protein (572aa)
Uncharacterized protein n=1 Tax=uncultured bacterium 1250012-L08 RepID=S4W7C7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AGO87794.1}; TaxID=1343838 species="Bacteria; environmental samples.;" source="uncultured bacterium 1250012-L08.;"
putative glycosyl hydrolase
DolJOral78_scaffold_1738_21
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(20528..21919)
DNA (1392bp) protein (464aa)
Putative efflux protein, MATE family id=3927316 bin=GWF2_Lentisphaerae_57_35 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459 rbh
putative efflux protein, MATE family Tax=GWF2_Lentisphaerae_57_35_curated
putative efflux protein, MATE family
DolJOral78_scaffold_1738_22
Paenibacillus beijingensis, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21912..22685)
DNA (774bp) protein (258aa)
Uncharacterized protein {ECO:0000313|EMBL:AJY73705.1}; TaxID=1126833 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus beijingensis.;"
DolJOral78_scaffold_1738_23
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22927..23169
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003611525
RNA recognition motif-containing protein {ECO:0000313|EMBL:KEZ75783.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaeraceae; Salinisphaera.;" sour
RNP-1 like RNA-binding protein
DolJOral78_scaffold_1738_24
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

23345..23587
DNA (243bp) protein (81aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI0003611525
RNP-1 like RNA-binding protein
RNP-1 like RNA-binding protein {ECO:0000313|EMBL:AEW02731.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella kore
DolJOral78_scaffold_1738_25
CG_CP01_01, CG_CP01, Bacteria

Not on your lists

comp(23832..24125)
DNA (294bp) protein (98aa)
Dinitrogenase iron-molybdenum cofactor biosynthesis n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQD9_PELPD
ParA/MinD-like ATPase Tax=CG_CP01_01
dinitrogenase iron-molybdenum cofactor biosynthesis
DolJOral78_scaffold_1738_26
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

comp(24164..25075)
DNA (912bp) protein (304aa)
cobyrinic acid ac-diamide synthase Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
Cobyrinic acid ac-diamide synthase id=2709335 bin=GWF2_Lentisphaerae_49_21 species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_49_21 organism_group=Lentisphaerae organism_desc=Very large genome: good + rbh
cobyrinic acid ac-diamide synthase
DolJOral78_scaffold_1738_27
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25057..25926)
DNA (870bp) protein (290aa)
MinD superfamily P-loop ATPase n=1 Tax=Photobacterium sp. AK15 RepID=L8JDB7_9GAMM
(4Fe-4S)-binding protein {ECO:0000313|EMBL:AJY71383.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurred
cobyrinic acid ac-diamide synthase
DolJOral78_scaffold_1738_28
RBG_13_Deltaproteobacteria_49_15_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25923..26762)
DNA (840bp) protein (280aa)
Cobyrinic acid a,c-diamide synthase n=1 Tax=Pelobacter propionicus (strain DSM 2379) RepID=A1AQE3_PELPD
cobyrinic acid ac-diamide synthase Tax=RBG_13_Deltaproteobacteria_49_15_curated
cobyrinic acid a,c-diamide synthase
DolJOral78_scaffold_1738_29
Pelobacter carbinolicus, Pelobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26762..27121)
DNA (360bp) protein (120aa)
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifB/NifX-related protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A479_PELCD
nitrogenase molybdenum-iron cofactor biosynthesis NifB/NifX-like protein
Nitrogenase molybdenum-iron cofactor biosynthesis protein NifB/NifX-related protein {ECO:0000313|EMBL:ABA88828.1}; TaxID=338963 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadal
DolJOral78_scaffold_1738_30
unknown

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comp(27180..27350)
DNA (171bp) protein (57aa)

This feature has no annotations

Displaying items 1-30 of 34 in total

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