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DolJOral78_scaffold_632

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Displaying items 1-30 of 72 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_632_1
unknown

Not on your lists

comp(191..409)
DNA (219bp) protein (73aa)

This feature has no annotations

DolJOral78_scaffold_632_2
RBG_16_Chloroflexi_47_49_curated, Chloroflexi, Bacteria

Not on your lists

comp(559..1356)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Thermodesulfatator atlanticus RepID=UPI0003B51904
hypothetical protein Tax=RBG_16_Chloroflexi_47_49_curated
methylase
DolJOral78_scaffold_632_3
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

comp(1873..2502)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003814921
hypothetical protein Tax=RBG_16_Spirochaetes_49_21_curated
hypothetical protein
DolJOral78_scaffold_632_4
CG_Delta_04, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3066..3245)
DNA (180bp) protein (60aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0Y5_9DELT
hypothetical protein Tax=CG_Delta_04
hypothetical protein
DolJOral78_scaffold_632_5
unknown

Not on your lists

comp(3675..3818)
DNA (144bp) protein (48aa)

This feature has no annotations

DolJOral78_scaffold_632_6
Grimontia sp. AD028, Grimontia, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4418..5329)
DNA (912bp) protein (304aa)
Extracellular solute-binding protein, family 3 n=1 Tax=Grimontia sp. AK16 RepID=R1GUE8_9GAMM
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KKD60527.1}; TaxID=1581149 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Grimontia.;" source="Grimontia
ABC transporter periplasmic protein
DolJOral78_scaffold_632_7
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5341..6063)
DNA (723bp) protein (241aa)
His/Glu/Gln/Arg/opine ABC transporter permease n=2 Tax=Paenibacillus mucilaginosus RepID=H6NHT4_9BACL
amino acid ABC transporter permease
His/Glu/Gln/Arg/opine ABC transporter permease {ECO:0000313|EMBL:AFC30155.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus
DolJOral78_scaffold_632_8
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6077..6787)
DNA (711bp) protein (237aa)
Amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein n=1 Tax=Desulfosporosinus sp. OT RepID=G2FL26_9FIRM
ABC-type amino acid transport system, permease component {ECO:0000313|EMBL:KJR48819.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" sou
arginine ABC transporter permease
DolJOral78_scaffold_632_9
Rhizobium tropici, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6787..7518)
DNA (732bp) protein (244aa)
Putative polar amino acid ABC transporter, ATP-binding protein n=1 Tax=Rhizobium tropici CIAT 899 RepID=L0LRY0_RHITR
putative polar amino acid ABC transporter, ATP-binding protein
Putative polar amino acid ABC transporter, ATP-binding protein {ECO:0000313|EMBL:AGB74058.1}; TaxID=698761 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/
DolJOral78_scaffold_632_10
bacterium UASB14, Bacteria

Not on your lists

comp(7773..9641)
DNA (1869bp) protein (623aa)
Putative flavoprotein n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PM25_DESSD
Beta-lactamase domain protein {ECO:0000313|EMBL:GAK51826.1}; TaxID=1499966 species="Bacteria.;" source="bacterium UASB14.;"
putative flavoprotein
DolJOral78_scaffold_632_11
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(10092..11012)
DNA (921bp) protein (307aa)
ATP-dependent 6-phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339}; Short=ATP-PFK {ECO:0000256|HAMAP-Rule:MF_00339};; Short=Phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_00339};; EC=2.7.1.11 {ECO:
6-phosphofructokinase n=1 Tax=Meiothermus silvanus (strain ATCC 700542 / DSM 9946 / VI-R2) RepID=D7BE75_MEISD
6-phosphofructokinase
DolJOral78_scaffold_632_12

Not on your lists


comp(11064..11438)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI000372222F
Uncharacterized protein {ECO:0000313|EMBL:KKM98815.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
rplQ; 50S ribosomal protein L17
DolJOral78_scaffold_632_13
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11455..12447)
DNA (993bp) protein (331aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=1 Tax=Acetohalobium arabaticum (strain ATCC 49924 / DSM 5501 / Z-7288) RepID=D9QTH6_ACEAZ
DolJOral78_scaffold_632_14
marine actinobacterium MedAcidi-G2A, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(12477..12878)
DNA (402bp) protein (134aa)
30S ribosomal protein S11 n=3 Tax=Parvimonas RepID=A8SNA9_9FIRM
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1550400 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G2A.;"
30S ribosomal protein S11
DolJOral78_scaffold_632_15

Not on your lists


comp(12886..13251)
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=RS13_DESAH
Marine sediment metagenome DNA, contig: S03H2_S08099 {ECO:0000313|EMBL:GAH50387.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rpsM; 30S ribosomal protein S13
DolJOral78_scaffold_632_16
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

Not on your lists

comp(13407..13631)
DNA (225bp) protein (75aa)
Translation initiation factor IF-1 n=12 Tax=Firmicutes RepID=IF1_BACHD id=5223091 bin=16ft_combo_ws3_JS1 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Firmicutes tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
protein translation initiation factor 1; K02518 translation initiation factor IF-1 Tax=RBG_13_Spirochaetes_51_14_curated
infA; translation initiation factor IF-1
DolJOral78_scaffold_632_17
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13680..14426)
DNA (747bp) protein (249aa)
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
Methionine aminopeptidase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SKX9_THEM7
DolJOral78_scaffold_632_18
Streptomyces sp. PRh5, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14417..14992)
DNA (576bp) protein (192aa)
Adenylate kinase {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU003331}; Short=AK {ECO:0000256|HAMAP-Rule:MF_00235};; EC=2.7.4.3 {ECO:0000256|HAMAP-Rule:MF_00235, ECO:0000256|RuleBase:RU0033
Adenylate kinase n=2 Tax=Corynebacterium RepID=E2MUP1_CORAY
hypothetical protein
DolJOral78_scaffold_632_19
RBG_16_Zixibacteria_50_21_curated, Zixibacteria, Bacteria

Not on your lists


comp(14989..16293)
DNA (1305bp) protein (435aa)
Protein translocase subunit SecY n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L8J0_9BACT
secY; Preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY Tax=RBG_16_Zixibacteria_50_21_curated
secY; preprotein translocase subunit SecY
DolJOral78_scaffold_632_20
BJP_IG2158_Zixibacteria_48_33, Zixibacteria, Bacteria

Not on your lists


comp(16293..16736)
DNA (444bp) protein (148aa)
50S ribosomal protein L15 n=1 Tax=Orenia marismortui RepID=UPI000363443A
50S ribosomal protein L15
Tax=BJP_IG2158_Zixibacteria_48_33
DolJOral78_scaffold_632_21
CG_Ignavi_02, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists


comp(16733..16924)
DNA (192bp) protein (64aa)
Ribosomal protein L30 n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AI35_IGNAJ
50S ribosomal protein L30 Tax=CG_Ignavi_02
rpmD; 50S ribosomal protein L30
DolJOral78_scaffold_632_22
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16917..17522)
DNA (606bp) protein (202aa)
UPI0003D5F894 related cluster n=1 Tax=unknown RepID=UPI0003D5F894
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desu
30S ribosomal protein S5
DolJOral78_scaffold_632_23
Desulfurobacterium thermolithotrophum, Desulfurobacterium, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists


comp(17532..17894)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B3FD12
50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=868864 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Desulfurobacterium.;" source="Desulfurobacterium th
DolJOral78_scaffold_632_24
marine actinobacterium MedAcidi-G3, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(17911..18456)
DNA (546bp) protein (182aa)
50S ribosomal protein L6 n=1 Tax=Brevibacterium mcbrellneri ATCC 49030 RepID=D4YJE7_9MICO
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1550402 species="Bacteria; Actinobacteria.;" source="marine actinobacterium MedAcidi-G3.;"
rplF; 50S ribosomal protein L6
DolJOral78_scaffold_632_25
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(18468..18836)
DNA (369bp) protein (123aa)
30S ribosomal protein S8 n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M2F9_CLOCD
30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium clariflavum
DolJOral78_scaffold_632_26
Streptomycetaceae bacterium MP113-05, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(19061..19621)
DNA (561bp) protein (187aa)
50S ribosomal protein L5 n=1 Tax=Streptomycetaceae bacterium MP113-05 RepID=V6KE43_9ACTO
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=1380770 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae.;" source="Streptomycetaceae bacterium MP113-05.;"
50S ribosomal protein L5
DolJOral78_scaffold_632_27
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists


comp(19648..19959)
DNA (312bp) protein (104aa)
50S ribosomal protein L24 id=2637431 bin=GWF2_WWE1_40_14 species=Desulfobacula toluolica genus=Desulfobacula taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1
rplX; 50S ribosomal protein L24 RplX Tax=GWF2_WWE1X_40_14_curated
rplX; 50S ribosomal protein L24
DolJOral78_scaffold_632_28
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(19960..20325)
DNA (366bp) protein (122aa)
50S ribosomal protein L14 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2Y2_ACIFD
50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimi
DolJOral78_scaffold_632_29
Thermovibrio ammonificans, Thermovibrio, Desulfurobacteriales, Aquificae, Aquificae, Bacteria

Not on your lists


comp(20338..20601)
DNA (264bp) protein (88aa)
30S ribosomal protein S17 n=1 Tax=Desulfurobacterium sp. TC5-1 RepID=UPI0003B3AFAC
30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=648996 species="Bacteria; Aquificae; Desulfurobacteriales; Desulfurobacteriaceae; Thermovibrio.;" sour
DolJOral78_scaffold_632_30
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists


comp(20604..20819)
DNA (216bp) protein (72aa)
50S ribosomal protein L29 n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AA45_THEID
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteriaceae; Thermodesulfatator.;" source="T
Displaying items 1-30 of 72 in total

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