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DolJOral78_scaffold_1698

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1698_1
Methylomicrobium album, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..451
DNA (450bp) protein (150aa)
Transposase n=1 Tax=Methylomicrobium album BG8 RepID=H8GJ63_METAL
Transposase {ECO:0000313|EMBL:EIC27880.1}; TaxID=686340 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium album BG
IS1480 transposase
DolJOral78_scaffold_1698_2
unknown

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comp(485..793)
DNA (309bp) protein (103aa)

This feature has no annotations

DolJOral78_scaffold_1698_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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836..1522
DNA (687bp) protein (229aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUV8_9GAMM
HAD-superfamily hydrolase, subfamily IA, variant 3 {ECO:0000313|EMBL:EIJ35151.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sourc
HAD-superfamily hydrolase
DolJOral78_scaffold_1698_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1623..3779
DNA (2157bp) protein (719aa)
relA; (p)ppGpp synthetase (EC:2.7.6.5)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000380744D rbh
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:EIJ35150.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
DolJOral78_scaffold_1698_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3801..4883)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037CB4F0 rbh
Type II secretion system protein C (GspC) {ECO:0000313|EMBL:EIJ35200.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thioth
general secretion pathway protein C
DolJOral78_scaffold_1698_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4902..5924)
DNA (1023bp) protein (341aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV08_9GAMM rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIJ35201.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
NAD-dependent epimerase/dehydratase
DolJOral78_scaffold_1698_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5941..6834)
DNA (894bp) protein (298aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194445}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000256|SAAS:SAAS00194458};;
phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV09_9GAMM rbh
DolJOral78_scaffold_1698_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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6926..7423
DNA (498bp) protein (166aa)
phosphoribosylaminoimidazole carboxylase catalytic subunit (EC:4.1.1.21)
N5-carboxyaminoimidazole ribonucleotide mutase n=1 Tax=Thiothrix disciformis RepID=UPI00035ED537
N5-carboxyaminoimidazole ribonucleotide mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338}; Short=N5-CAIR mutase {ECO:0000256|HAMAP-Rule:MF_01929, ECO:0000256|PIRNR:PIRNR001338};;
DolJOral78_scaffold_1698_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7448..8587
DNA (1140bp) protein (380aa)
phosphoribosylaminoimidazole carboxylase ATPase subunit (EC:4.1.1.21)
5-(Carboxyamino)imidazole ribonucleotide synthase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV11_9GAMM rbh
N5-carboxyaminoimidazole ribonucleotide synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU361200}; Short=N5-CAIR synthase {ECO:0000256|HAMAP-Rule:MF_01928, ECO:0000256|RuleBase:RU36120
DolJOral78_scaffold_1698_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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8584..9177
DNA (594bp) protein (198aa)
methyltransferase n=1 Tax=Thiothrix disciformis RepID=UPI00037E7206 rbh
16S rRNA m(2)G 1207 methyltransferase {ECO:0000313|EMBL:EIJ35206.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix
methyltransferase small
DolJOral78_scaffold_1698_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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9374..11677
DNA (2304bp) protein (768aa)
Allosteric NADP-dependent malic enzyme {ECO:0000313|EMBL:EIJ34996.1}; EC=1.1.1.40 {ECO:0000313|EMBL:EIJ34996.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Th
malic enzyme n=1 Tax=Thiothrix disciformis RepID=UPI00036D4D5F rbh
malic enzyme
DolJOral78_scaffold_1698_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11770..13167)
DNA (1398bp) protein (466aa)
TRAP dicarboxylate transporter, DctM subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUF6_9GAMM rbh
TRAP dicarboxylate transporter, DctM subunit {ECO:0000313|EMBL:EIJ34999.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiot
C4-dicarboxylate transport protein
DolJOral78_scaffold_1698_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13164..13706)
DNA (543bp) protein (181aa)
Tripartite ATP-independent periplasmic transporter DctQ component n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUF5_9GAMM
Tripartite ATP-independent periplasmic transporter DctQ component {ECO:0000313|EMBL:EIJ34998.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
Tripartite ATP-independent periplasmic transporter subunit DctQ
DolJOral78_scaffold_1698_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13812..14810)
DNA (999bp) protein (333aa)
TRAP dicarboxylate transporter, DctP subunit n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUF4_9GAMM rbh
TRAP dicarboxylate transporter, DctP subunit {ECO:0000313|EMBL:EIJ34997.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiot
TRAP dicarboxylate transporter subunit DctP
DolJOral78_scaffold_1698_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15111..15686
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037FDE70
LemA family protein {ECO:0000313|EMBL:EIJ34988.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
LemA
DolJOral78_scaffold_1698_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15683..16582
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUE4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EIJ34987.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolJOral78_scaffold_1698_17
unknown

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16678..17322
DNA (645bp) protein (215aa)

This feature has no annotations

DolJOral78_scaffold_1698_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(17351..19087)
DNA (1737bp) protein (579aa)
Cl-channel voltage-gated family protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BUA7_9GAMM
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:EIJ34950.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothri
chloride channel core
DolJOral78_scaffold_1698_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19219..19548
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037F9779
Uncharacterized protein {ECO:0000313|EMBL:EIJ36434.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
conserved protein of unknown function
DolJOral78_scaffold_1698_20
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19578..20207)
DNA (630bp) protein (210aa)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-
hisH; imidazole glycerol phosphate synthase subunit HisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV79_9GAMM rbh
DolJOral78_scaffold_1698_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20207..20800)
DNA (594bp) protein (198aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, E
hisB; imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
imidazoleglycerol-phosphate dehydratase n=1 Tax=Thiothrix disciformis RepID=UPI000369B798 rbh
DolJOral78_scaffold_1698_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20852..22012)
DNA (1161bp) protein (387aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=870187 species="Bacteria; Proteobacteria; Gamm
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037B2E17
ribonuclease D
DolJOral78_scaffold_1698_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22312..24072)
DNA (1761bp) protein (587aa)
Lysyl endopeptidase (EC:3.4.21.50)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BTN8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ34731.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiot
DolJOral78_scaffold_1698_24
Halothece sp. PCC 7418, Halothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(24069..24740)
DNA (672bp) protein (224aa)
Outer membrane adhesin like proteiin {ECO:0000313|EMBL:AFZ42797.1}; TaxID=65093 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Halothece cluster; Halothece.;" source="Halothec
DolJOral78_scaffold_1698_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24988..25842
DNA (855bp) protein (285aa)
methylenetetrahydrofolate dehydrogenase (EC:1.5.1.5)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036353C2 rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS
Displaying 25 items

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