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DolJOral78_scaffold_80

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Displaying items 1-30 of 111 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_80_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124..1326)
DNA (1203bp) protein (401aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BXB9_9GAMM
DolJOral78_scaffold_80_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1664..3262
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000368E20C rbh
Peptidase M23 {ECO:0000313|EMBL:EIJ36011.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
peptidase M23
DolJOral78_scaffold_80_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3361..3825)
DNA (465bp) protein (155aa)
Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BR95_9GAMM
Transcriptional regulator, BadM/Rrf2 family {ECO:0000313|EMBL:EIJ33888.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thio
iron-sulfur cluster assembly transcription factor IscR
DolJOral78_scaffold_80_4
unknown

Not on your lists

3908..4063
DNA (156bp) protein (52aa)

This feature has no annotations

DolJOral78_scaffold_80_5
unknown

Not on your lists

comp(3994..4347)
DNA (354bp) protein (118aa)

This feature has no annotations

DolJOral78_scaffold_80_6
Xanthomonas euvesicatoria, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4569..5762)
DNA (1194bp) protein (398aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037C1550 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ23253.1}; TaxID=316273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas campes
DolJOral78_scaffold_80_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5795..7111)
DNA (1317bp) protein (439aa)
ribosomal protein S12 methylthiotransferase n=1 Tax=Thiothrix disciformis RepID=UPI000364F6FB rbh
Ribosomal protein S12 methylthiotransferase RimO {ECO:0000256|HAMAP-Rule:MF_01865, ECO:0000256|SAAS:SAAS00083292}; Short=S12 MTTase {ECO:0000256|HAMAP-Rule:MF_01865};; Short=S12 methylthiotransferase
2-alkenal reductase
DolJOral78_scaffold_80_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7212..7634)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036072F7
Histidine triad (HIT) protein {ECO:0000313|EMBL:EIJ35079.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS
diadenosine tetraphosphate (Ap4A) hydrolase
DolJOral78_scaffold_80_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7631..8680)
DNA (1050bp) protein (350aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00037F8357 rbh
Oxidoreductase FAD/NAD(P)-binding domain protein {ECO:0000313|EMBL:EIJ35080.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source=
oxidoreductase FAD/NAD(P)-binding domain-containing protein
DolJOral78_scaffold_80_10
unknown

Not on your lists

8789..9499
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000360B385
DolJOral78_scaffold_80_11
Arthrospira platensis, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9513..9998)
DNA (486bp) protein (162aa)
type II restriction endonuclease PvuII n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI00034D8141
Type II site-specific deoxyribonuclease {ECO:0000313|EMBL:EKD08191.1}; TaxID=459495 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira platens
type II restriction endonuclease PvuII
DolJOral78_scaffold_80_12
Arthrospira sp. PCC 8005, Arthrospira, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(9995..10219)
DNA (225bp) protein (75aa)
XRE family transcriptional regulator n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI000371A6B5
Putative transcriptional regulator {ECO:0000313|EMBL:CCE18298.1}; TaxID=376219 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Arthrospira.;" source="Arthrospira sp. PCC 8005
subunit S of type I restriction-modification system
DolJOral78_scaffold_80_13
Proteus hauseri, Proteus, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10293..11297
DNA (1005bp) protein (335aa)
Modification methylase PvuII; Short=M.PvuII;; EC=2.1.1.113;; N-4 cytosine-specific methyltransferase PvuII; TaxID=183417 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
DNA methyltransferase n=1 Tax=Synechococcus sp. PCC 7336 RepID=UPI0003453D84 rbh
hsdM; DNA methyltransferase SptAIM; protects DNA against PvuII endonuclease
DolJOral78_scaffold_80_14
Beggiatoa sp. PS, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11546..12064
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Methylobacter marinus RepID=UPI0003689AB7
Peptidase M23B {ECO:0000313|EMBL:EDN65881.1}; TaxID=422289 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Beggiatoa.;" source="Beggiatoa sp. PS.;"
M23 peptidase domain-containing protein
DolJOral78_scaffold_80_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12081..12779
DNA (699bp) protein (233aa)
chemotaxis protein CheY n=1 Tax=Thiothrix disciformis RepID=UPI00037D4B04
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EIJ34554.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothri
response regulator with CheY-like receiver domain and winged-helix DNA-binding domain
DolJOral78_scaffold_80_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12773..14422
DNA (1650bp) protein (550aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thio
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000378080E rbh
ATPase domain-containing protein
DolJOral78_scaffold_80_17
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14572..15309
DNA (738bp) protein (246aa)
glutaredoxin n=1 Tax=Thiothrix flexilis RepID=UPI00037B5A21 rbh
Glutaredoxin domain protein region {ECO:0000313|EMBL:EIJ35597.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix niv
glutathione amide-dependent peroxidase rbh
DolJOral78_scaffold_80_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15463..16827
DNA (1365bp) protein (455aa)
NADPH-glutathione reductase {ECO:0000313|EMBL:EIJ35598.1}; EC=1.8.1.7 {ECO:0000313|EMBL:EIJ35598.1};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae
glutathione reductase n=1 Tax=Thiothrix disciformis RepID=UPI00036ECA9B rbh
glutathione-disulfide reductase
DolJOral78_scaffold_80_19

Not on your lists

comp(16907..18361)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00035E5028
Uncharacterized protein {ECO:0000313|EMBL:KKN45262.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
DolJOral78_scaffold_80_20
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18575..20029)
DNA (1455bp) protein (485aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000373DE92 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIJ35024.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_80_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20114..20452)
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000370E84E
Uncharacterized protein {ECO:0000313|EMBL:EIJ35023.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_80_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20589..21203)
DNA (615bp) protein (205aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|RuleBase:RU003992};; TaxID=870187 species="Bacteria; Proteob
Repressor lexA (EC:3.4.21.88)
umuDC operon protein-like protein n=1 Tax=Thiothrix disciformis RepID=UPI000365CD6D
DolJOral78_scaffold_80_23
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21399..24185)
DNA (2787bp) protein (929aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-
(glutamate--ammonia-ligase) adenylyltransferase (EC:2.7.7.42)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI00036983B3 rbh
DolJOral78_scaffold_80_24
GWF2_Bacteroidetes_41_31_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24383..24919
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003741EA4
hypothetical protein Tax=GWF2_Bacteroidetes_41_31_curated
Mesenchymal stem cell protein DSCD75
DolJOral78_scaffold_80_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25090..26016
DNA (927bp) protein (309aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BY12_9GAMM rbh
NAD-dependent epimerase/dehydratase {ECO:0000313|EMBL:EIJ36255.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
nucleoside-diphosphate sugar epimerase
DolJOral78_scaffold_80_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26103..26618
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000371FA9E
Uncharacterized protein {ECO:0000313|EMBL:EIJ33300.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
DolJOral78_scaffold_80_27
Photobacterium aphoticum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26808..29207
DNA (2400bp) protein (800aa)
Serine/threonine protein kinase {ECO:0000313|EMBL:GAL04521.1}; EC=2.7.11.1 {ECO:0000313|EMBL:GAL04521.1};; TaxID=754436 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionacea
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI0003656B7A
DolJOral78_scaffold_80_28
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29317..30957)
DNA (1641bp) protein (547aa)
molecular chaperone GroEL n=1 Tax=Thiothrix disciformis RepID=UPI00037AEA36 rbh
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=870187 speci
groEL; chaperonin GroEL
DolJOral78_scaffold_80_29
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30997..31287)
DNA (291bp) protein (97aa)
molecular chaperone GroES n=1 Tax=Thiothrix flexilis RepID=UPI0003649D0A
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=870187 speci
Heat shock protein 60 family co-chaperone GroES
DolJOral78_scaffold_80_30
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31444..31968)
DNA (525bp) protein (175aa)
exlusion protein FxsA n=1 Tax=Leucothrix mucor RepID=UPI0003B42923
FxsA cytoplasmic membrane protein {ECO:0000313|EMBL:EHQ52238.1}; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Ectothiorhodospira.;" source
FxsA cytoplasmic membrane protein
Displaying items 1-30 of 111 in total

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