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DolJOral78_scaffold_2064

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Displaying 24 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2064_1
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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147..1922
DNA (1776bp) protein (592aa)
Aspartyl-tRNA synthetase {ECO:0000313|EMBL:EAQ51210.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EAQ51210.1};; TaxID=398720 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae;
Aspartate--tRNA ligase n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XHN5_LEEBM
aspartyl-tRNA synthetase
DolJOral78_scaffold_2064_2
Formosa sp. AK20, Formosa, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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1975..3780
DNA (1806bp) protein (602aa)
Putative chloride channel protein n=1 Tax=Formosa sp. AK20 RepID=M7MIT6_9FLAO rbh
Putative chloride channel protein {ECO:0000313|EMBL:EMQ96192.1}; TaxID=1137281 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Formosa.;" source="Formosa sp. AK2
Cl-channel voltage-gated family protein
DolJOral78_scaffold_2064_3
Joostella marina, Joostella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3839..4921)
DNA (1083bp) protein (361aa)
Peptide chain release factor 2 n=1 Tax=Joostella marina DSM 19592 RepID=I3C9J7_9FLAO rbh
Peptide chain release factor 2 {ECO:0000256|SAAS:SAAS00090452}; TaxID=926559 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Joostella.;" source="Joostella marin
prfB; peptide chain release factor 2 (RF-2)
DolJOral78_scaffold_2064_4
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(4958..7498)
DNA (2541bp) protein (847aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI0003769445
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
DolJOral78_scaffold_2064_5
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7632..8360
DNA (729bp) protein (243aa)
Probable tRNA/rRNA methyltransferase n=1 Tax=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) RepID=A6GWG5_FLAPJ
RNA methyltransferase
RNA methyltransferase {ECO:0000313|EMBL:KFC58258.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. E
DolJOral78_scaffold_2064_6
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8450..9151)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00036C6344
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EAQ40583.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED1
DolJOral78_scaffold_2064_7
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(9193..9921)
DNA (729bp) protein (243aa)
Demethylmenaquinone methyltransferase {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacterial
Demethylmenaquinone methyltransferase n=1 Tax=Flavobacterium sp. F52 RepID=J1KRK7_9FLAO
ubiquinone/menaquinone biosynthesis methyltransferase UbiE
DolJOral78_scaffold_2064_8
Leeuwenhoekiella blandensis, Leeuwenhoekiella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10196..11245
DNA (1050bp) protein (350aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XI59_LEEBM rbh
tRNA ribosyltransferase-isomerase
DolJOral78_scaffold_2064_9
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(11403..12149)
DNA (747bp) protein (249aa)
hemD; uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EAQ42698.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EAQ42698.1};; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriac
uroporphyrinogen-III synthase n=1 Tax=Polaribacter franzmannii RepID=UPI000366D003 rbh
DolJOral78_scaffold_2064_10
RLO_Flavobacteria_35_11, Flavobacteriia, Bacteroidetes, Bacteria

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comp(12195..12848)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XL71_LEEBM
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Flavobacteria_35_11_curated
hypothetical protein
DolJOral78_scaffold_2064_11
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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12920..13639
DNA (720bp) protein (240aa)
Glycosyl transferase family 2 n=1 Tax=Polaribacter sp. MED152 RepID=A2TYM2_9FLAO rbh
glycosyl transferase family 2
Glycosyl transferase family 2 {ECO:0000313|EMBL:EAQ42700.1}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp
DolJOral78_scaffold_2064_12
Polaribacter sp. MED152, Polaribacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

13751..15088
DNA (1338bp) protein (446aa)
Dihydroorotase n=1 Tax=Polaribacter sp. MED152 RepID=A2TYM3_9FLAO
dihydroorotase
Dihydroorotase {ECO:0000256|SAAS:SAAS00252556}; TaxID=313598 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Polaribacter.;" source="Polaribacter sp. MED152.;"
DolJOral78_scaffold_2064_13
Imtechella halotolerans, Imtechella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15106..15459)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Imtechella halotolerans K1 RepID=I0WJR1_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EID76627.1}; TaxID=946077 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Imtechella.;" source="Imtechella halotolerans
hypothetical protein
DolJOral78_scaffold_2064_14
Flavobacteria bacterium MS024-3C, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15468..16094)
DNA (627bp) protein (209aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=487797 species="Bacteria; Bacteroidetes; Flavobacteriia.;" source="Flavobacteria bacterium MS024-
canA2; carbonate dehydratase (EC:4.2.1.1)
Carbonic anhydrase n=1 Tax=Flavobacteria bacterium MS024-3C RepID=C0BLP4_9BACT
DolJOral78_scaffold_2064_15
Gillisia limnaea, Gillisia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16133..16807)
DNA (675bp) protein (225aa)
Regulatory protein TetR n=1 Tax=Gillisia limnaea DSM 15749 RepID=H2BVW4_9FLAO rbh
Regulatory protein TetR {ECO:0000313|EMBL:EHQ01847.1}; TaxID=865937 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gillisia.;" source="Gillisia limnaea DSM 1574
TetR family transcriptional regulator
DolJOral78_scaffold_2064_16
Psychroflexus torquis, Psychroflexus, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17116..17865
DNA (750bp) protein (250aa)
Carbonic anhydrase, beta-type CynT n=1 Tax=Psychroflexus torquis (strain ATCC 700755 / ACAM 623) RepID=K4IPB8_PSYTT rbh
carbonic anhydrase, beta-type CynT rbh
Carbonic anhydrase, beta-type CynT {ECO:0000313|EMBL:AFU67370.1}; TaxID=313595 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Psychroflexus.;" source="Psychrofl
DolJOral78_scaffold_2064_17
Zunongwangia profunda, Zunongwangia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

18100..19296
DNA (1197bp) protein (399aa)
2-amino-3-ketobutyrate coenzyme A ligase {ECO:0000256|HAMAP-Rule:MF_00985}; Short=AKB ligase {ECO:0000256|HAMAP-Rule:MF_00985};; EC=2.3.1.29 {ECO:0000256|HAMAP-Rule:MF_00985};; Glycine acetyltransfera
2-amino-3-ketobutyrate coenzyme A ligase n=1 Tax=Zunongwangia profunda (strain DSM 18752 / CCTCC AB 206139 / SM-A87) RepID=D5BDP0_ZUNPS rbh
2-amino-3-ketobutyrate CoA ligase
DolJOral78_scaffold_2064_18
Winogradskyella psychrotolerans, Winogradskyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19306..19761
DNA (456bp) protein (152aa)
Queuosine biosynthesis QueD, PTPS-I n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7X8Q3_9FLAO
Queuosine biosynthesis QueD, PTPS-I {ECO:0000313|EMBL:EPR72423.1}; TaxID=641526 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Winogradskyella.;" source="Winogr
6-pyruvoyl-tetrahydropterin synthase
DolJOral78_scaffold_2064_19
Vitellibacter vladivostokensis, Vitellibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19824..22001)
DNA (2178bp) protein (726aa)
Outer membrane receptor protein n=1 Tax=Aequorivita sublithincola (strain DSM 14238 / LMG 21431 / ACAM 643 / 9-3) RepID=I3YV75_AEQSU rbh
TonB-dependent receptor {ECO:0000313|EMBL:KJJ37677.1}; TaxID=171194 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Vitellibacter.;" source="Vitellibacter vladiv
outer membrane receptor protein
DolJOral78_scaffold_2064_20
unknown

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comp(22387..23043)
DNA (657bp) protein (219aa)

This feature has no annotations

DolJOral78_scaffold_2064_21
unknown

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comp(23021..23641)
DNA (621bp) protein (207aa)

This feature has no annotations

DolJOral78_scaffold_2064_22
Flavobacterium sp. EM1308, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(23634..24809)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Flavobacterium sp. WG21 RepID=UPI00034A92C2
Uncharacterized protein {ECO:0000313|EMBL:KFC59907.1}; TaxID=1492737 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp.
DolJOral78_scaffold_2064_23
Chryseobacterium vrystaatense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24989..25234
DNA (246bp) protein (82aa)
DNA-binding protein {ECO:0000313|EMBL:KFF23736.1}; TaxID=307480 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium vrys
Helix-turn-helix domain protein id=1980996 bin=GWD2_Bacteroidetes_40_43 species=Sphingobacterium sp. genus=Sphingobacterium taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
helix-turn-helix domain-containing protein
DolJOral78_scaffold_2064_24
unknown

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comp(25280..25372)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 24 items

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