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DolJOral78_scaffold_1223

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Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1223_1
unknown

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1..153
DNA (153bp) protein (51aa)

This feature has no annotations

DolJOral78_scaffold_1223_2
RLO_RIF03_38_15, RIF3, Bacteria

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156..923
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B39A51
putative ABC transporter permease Tax=RIFCSPLOWO2_12_FULL_RIF03_38_15_curated
putative ABC transporter permease
DolJOral78_scaffold_1223_3
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1337..2725)
DNA (1389bp) protein (463aa)
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0S0_9DELT rbh
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:EIM63083.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacteral
two component system response regulator, sigma54-specific
DolJOral78_scaffold_1223_4
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2737..4011)
DNA (1275bp) protein (425aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=879212 species="B
pyrC; dihydroorotase PyrC (EC:3.5.2.3)
Dihydroorotase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0R7_9DELT
DolJOral78_scaffold_1223_5
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3995..4933)
DNA (939bp) protein (313aa)
pyrB; aspartate carbamoyltransferase PyrB (EC:2.1.3.2)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001, ECO:0000313|EMBL:CCK80353.1};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_0000
aspartate carbamoyltransferase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B530F9
DolJOral78_scaffold_1223_6
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4944..5597)
DNA (654bp) protein (218aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacter
signal peptidase I (EC:3.4.21.89)
signal peptidase I n=1 Tax=Desulfobacter curvatus RepID=UPI0003638547
DolJOral78_scaffold_1223_7
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5821..7200)
DNA (1380bp) protein (460aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0R3_9DELT
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EIM63076.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
peptidase, M23 family
DolJOral78_scaffold_1223_8
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7372..8187
DNA (816bp) protein (272aa)
2-dehydro-3-deoxyphosphooctonate aldolase {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078566}; EC=2.5.1.55 {ECO:0000256|HAMAP-Rule:MF_00056, ECO:0000256|SAAS:SAAS00078538};; 3-deoxy-D-man
kdsA; 2-dehydro-3-deoxyphosphooctonate aldolase KdsA (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase n=1 Tax=Desulfobacter curvatus RepID=UPI000364A762
DolJOral78_scaffold_1223_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8184..8741
DNA (558bp) protein (186aa)
kdsC; 3-deoxy-D-manno-octulosonate 8-phosphatase KdsC (EC:3.1.3.45)
HAD family hydrolase n=1 Tax=Desulfobacter curvatus RepID=UPI0003709398
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family {ECO:0000313|EMBL:EIM63074.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacteral
DolJOral78_scaffold_1223_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8738..9316
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000375CD59
Uncharacterized protein {ECO:0000313|EMBL:EIM63073.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
hypothetical protein
DolJOral78_scaffold_1223_11
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9294..9881
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0Q9_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIM63072.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
organic solvent tolerance protein, related to OstA
DolJOral78_scaffold_1223_12
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9908..10630
DNA (723bp) protein (241aa)
ABC transporter n=1 Tax=Desulfospira joergensenii RepID=UPI0003B5F3D9
lptB; lipopolysaccharide export system, ATP-binding protein LptB Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
lptB; lipopolysaccharide export system, ATP-binding protein LptB
DolJOral78_scaffold_1223_13
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10632..12077
DNA (1446bp) protein (482aa)
RNA polymerase sigma-54 factor n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0Q7_9DELT
RNA polymerase sigma-54 factor {ECO:0000256|PIRNR:PIRNR000774}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Des
rpoN; RNA polymerase sigma54 factor RpoN
DolJOral78_scaffold_1223_14
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12173..12631
DNA (459bp) protein (153aa)
PTS fructose transporter subunit IIA n=1 Tax=Desulfobacter curvatus RepID=UPI0003808039
PTS IIA-like nitrogen-regulatory protein
PTS IIA-like nitrogen-regulatory protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
DolJOral78_scaffold_1223_15
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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12686..13576
DNA (891bp) protein (297aa)
glmZ(sRNA)-inactivating NTPase n=1 Tax=Desulfobacter curvatus RepID=UPI0003768354
Nucleotide-binding protein DespoDRAFT_01097 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter
hypothetical protein
DolJOral78_scaffold_1223_16
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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13573..13989
DNA (417bp) protein (139aa)
Predicted fructose-specific phosphotransferase enzyme IIA component n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NGL2_DESTT
PTS system fructose-specific transporter subunit IIA
Predicted fructose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:CCK80366.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacter
DolJOral78_scaffold_1223_17
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14109..15116
DNA (1008bp) protein (336aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacte
gap; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) Gap (EC:1.2.1.12)
glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Desulfobacter curvatus RepID=UPI00037A16DA
DolJOral78_scaffold_1223_18
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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15118..15879
DNA (762bp) protein (254aa)
tpiA; triosephosphate isomerase TpiA (EC:5.3.1.1)
tpiA; triosephosphate isomerase TpiA (EC:5.3.1.1) Tax=RifOxyA12_full_Desulfobacula_46_16_curated
Triosephosphate isomerase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKB1_DESTT rbh
DolJOral78_scaffold_1223_19
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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15896..16183
DNA (288bp) protein (96aa)
SecG: preprotein translocase, subunit n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N8W4_DESTT
secG; preprotein translocase subunit SecG
SecG: preprotein translocase, subunit {ECO:0000313|EMBL:CCK80369.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source
DolJOral78_scaffold_1223_trna_1
unknown

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16201..16282
DNA (82bp)
transferRNA
DolJOral78_scaffold_1223_20
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16617..18365
DNA (1749bp) protein (583aa)
ATPase n=1 Tax=Desulfobacter curvatus RepID=UPI00037AE2FE
ATP-dependent protease Clp, ATPase subunit {ECO:0000313|EMBL:EIM63061.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
clpX; ATP-dependent Clp protease, ATP binding subunit ClpX
DolJOral78_scaffold_1223_21
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18362..19564
DNA (1203bp) protein (401aa)
Fe-S oxidoreductase n=1 Tax=Desulfobacter curvatus RepID=UPI00035E5574
Putative heme d1 biosynthesis radical SAM protein NirJ1 {ECO:0000313|EMBL:EIM63060.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desul
radical SAM domain-containing protein
DolJOral78_scaffold_1223_22
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19567..20541
DNA (975bp) protein (325aa)
Delta-aminolevulinic acid dehydratase {ECO:0000256|RuleBase:RU000515}; EC=4.2.1.24 {ECO:0000256|RuleBase:RU000515};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobactera
hemB; delta-aminolevulinic acid dehydratase HemB (EC:4.2.1.24)
delta-aminolevulinic acid dehydratase n=1 Tax=Desulfobacter curvatus RepID=UPI00036D82ED
DolJOral78_scaffold_1223_23
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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20541..21662
DNA (1122bp) protein (374aa)
radical SAM protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036A280A
Putative heme d1 biosynthesis radical SAM protein NirJ2 {ECO:0000313|EMBL:EIM63058.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desul
ppqE; coenzyme PQQ synthesis protein PqqE
DolJOral78_scaffold_1223_24
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21674..23755)
DNA (2082bp) protein (694aa)
pfk; phosphofructokinase Pfk (EC:2.7.1.90)
phosphofructokinase n=1 Tax=Desulfobacter curvatus RepID=UPI000373D65C
6-phosphofructokinase {ECO:0000313|EMBL:EIM63057.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter
DolJOral78_scaffold_1223_25
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23835..25247)
DNA (1413bp) protein (471aa)
diguanylate cyclase n=1 Tax=Desulfobacter curvatus RepID=UPI00036313A8
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EIM63056.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfo
diguanylate cyclase
DolJOral78_scaffold_1223_26
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25417..27240
DNA (1824bp) protein (608aa)
cell division protein FtsY n=1 Tax=Desulfobacter curvatus RepID=UPI00037DD9CD
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria;
ftsY; signal recognition particle-docking protein FtsY
DolJOral78_scaffold_1223_27
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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27527..29302
DNA (1776bp) protein (592aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FUE6_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EMS78320.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotign
hypothetical protein
DolJOral78_scaffold_1223_28
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29328..29666
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G3F2_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EMS78321.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotign
DolJOral78_scaffold_1223_29
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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29956..31677
DNA (1722bp) protein (574aa)
sodium:proton antiporter n=1 Tax=Desulfovibrio desulfuricans RepID=UPI00037A3002
Na+/H+ antiporter
Tax=BJP_IG2102_Clostridiales_34_350
Displaying items 1-30 of 31 in total

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