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DolJOral78_scaffold_1685

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_1685_1
unknown

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comp(2..76)
DNA (75bp) protein (25aa)

This feature has no annotations

DolJOral78_scaffold_1685_2
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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415..2214
DNA (1800bp) protein (600aa)
lytic transglycosylase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B62F4E
mltD; membrane-bound lytic murein transglycosylase D MltD
MltD: membrane-bound lytic murein transglycosylase D {ECO:0000313|EMBL:CCK81654.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfob
DolJOral78_scaffold_1685_trna_1
unknown

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2320..2391
DNA (72bp)
transferRNA
DolJOral78_scaffold_1685_3
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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2587..3096
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036B926C
Uncharacterized protein {ECO:0000313|EMBL:EIM62237.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_1685_4
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3103..4563
DNA (1461bp) protein (487aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B35F32
hypothetical protein
Conserved uncharacterized protein, DUF147 {ECO:0000313|EMBL:CCK81965.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" so
DolJOral78_scaffold_1685_5
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5287..6633)
DNA (1347bp) protein (449aa)
Amino acid carrier protein n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BRX1_DESAD
amino acid carrier protein
Amino acid carrier protein {ECO:0000313|EMBL:ACS81354.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfo
DolJOral78_scaffold_1685_6
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6914..8029)
DNA (1116bp) protein (372aa)
glycosyl transferase family 1 n=1 Tax=Desulfospira joergensenii RepID=UPI0003B33D5F rbh
Glycosyltransferase {ECO:0000313|EMBL:EIM64785.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter po
group 1 glycosyl transferase
DolJOral78_scaffold_1685_7
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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8222..9130
DNA (909bp) protein (303aa)
glutamate-tRNA ligase (EC:6.1.1.17)
Glutamyl-or glutaminyl-tRNA synthetase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B218_9DELT
Glutamyl-or glutaminyl-tRNA synthetase {ECO:0000313|EMBL:EIM63531.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" sourc
DolJOral78_scaffold_1685_8
Shewanella amazonensis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9373..10164
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6D4C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABL99778.1}; TaxID=326297 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella amazonensi
DolJOral78_scaffold_1685_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10415..11308
DNA (894bp) protein (298aa)
hisJ; histidinol phosphate phosphatase HisJ (EC:3.1.3.15)
Histidinol phosphate phosphatase HisJ family n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B5M1_9DELT
Histidinol phosphate phosphatase HisJ family {ECO:0000313|EMBL:EIM64784.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;"
DolJOral78_scaffold_1685_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11310..11756
DNA (447bp) protein (149aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518, ECO:0000256|SAAS:SAAS00160054}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteo
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Desulfobacter curvatus RepID=UPI000376C073
DolJOral78_scaffold_1685_11
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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11775..12536
DNA (762bp) protein (254aa)
tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ {ECO:0000256|RuleBase:RU362024}; EC=2.1.1.200 {ECO:0000256|RuleBase:RU362024};; tRNA (cytidine(32)/uridine(32)-2'-O)-methyltransferase {ECO:0000256
trmH; RNA methyltransferase, group 1 TrmH (EC:2.1.1.-)
RNA methyltransferase n=1 Tax=Desulfobacter curvatus RepID=UPI00036F8C60
DolJOral78_scaffold_1685_12
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12853..14961)
DNA (2109bp) protein (703aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B50A8C
FAD-dependent oxidoreductase
FAD-dependent oxidoreductase {ECO:0000313|EMBL:CCK79364.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfo
DolJOral78_scaffold_1685_13
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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15209..16342
DNA (1134bp) protein (378aa)
MorB: molybdopterin oxidoreductase, 4Fe-4S protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHN2_DESTT
morB; molybdopterin oxidoreductase, 4Fe-4S protein MorB
MorB: molybdopterin oxidoreductase, 4Fe-4S protein {ECO:0000313|EMBL:CCK79363.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobac
DolJOral78_scaffold_1685_14
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16484..17977
DNA (1494bp) protein (498aa)
MorA: molybdopterin oxidoreductase n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NKU9_DESTT
morA; molybdopterin oxidoreductase MorA
MorA: molybdopterin oxidoreductase {ECO:0000313|EMBL:CCK79362.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="D
DolJOral78_scaffold_1685_15
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18020..18961)
DNA (942bp) protein (314aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobac
rluD; ribosomal large subunit pseudouridine synthase D RluD (EC:5.4.99.-)
pseudouridine synthase n=1 Tax=Desulfobacter curvatus RepID=UPI0003781DBF
DolJOral78_scaffold_1685_16
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19034..19570)
DNA (537bp) protein (179aa)
CarD-like transcriptional regulator n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B5L7_9DELT
carD; transcriptional regulator, CarD family CarD Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
carD; transcriptional regulator, CarD family CarD
DolJOral78_scaffold_1685_17
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20120..20755)
DNA (636bp) protein (212aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
pth; peptidyl-tRNA hydrolase Pth (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B5L6_9DELT
DolJOral78_scaffold_1685_18
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20712..21356)
DNA (645bp) protein (215aa)
50S ribosomal protein L25 n=1 Tax=Desulfospira joergensenii RepID=UPI0003B683DF
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023358}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000256|SAAS:SAAS00023360}; TaxID=879212 sp
rplY; 50S ribosomal protein L25 RplY
DolJOral78_scaffold_1685_19
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21416..22357)
DNA (942bp) protein (314aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
prs; ribose-phosphate pyrophosphokinase (RPPK) Prs (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Desulfobacter curvatus RepID=UPI00037D6C89
DolJOral78_scaffold_1685_trna_2
unknown

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comp(22397..22468)
DNA (72bp)
transferRNA
DolJOral78_scaffold_1685_20
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22480..23406)
DNA (927bp) protein (309aa)
ispE; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (CMK) IspE (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003704618
DolJOral78_scaffold_1685_21
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23387..23695)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036C5382
hypothetical protein
Conserved uncharacterized protein, DUF1844 {ECO:0000313|EMBL:CCK79355.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" s
DolJOral78_scaffold_1685_22
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23804..25936)
DNA (2133bp) protein (711aa)
CoA-binding domain protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NHL5_DESTT
CoA-binding protein
CoA-binding domain protein {ECO:0000313|EMBL:CCK79353.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="Desulfoba
Displaying 24 items

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