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DolJOral78_scaffold_2362

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2362_1
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..1139
DNA (1137bp) protein (379aa)
aroH; protein AroH (EC:2.5.1.54)
AroH {ECO:0000313|EMBL:ACN14070.1}; EC=2.5.1.54 {ECO:0000313|EMBL:ACN14070.1};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacte
AroH n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QKJ9_DESAH
DolJOral78_scaffold_2362_2
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1205..2713)
DNA (1509bp) protein (503aa)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=1629713 species="Bacteria; Proteobacte
threonine dehydratase (EC:4.3.1.19)
Threonine dehydratase, biosynthetic id=4342012 bin=GWC2_Pelobacter_58_13 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
DolJOral78_scaffold_2362_3
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2810..3745)
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B7A4_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM65367.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_2362_trna_1
unknown

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3858..3930
DNA (73bp)
transferRNA
DolJOral78_scaffold_2362_trna_3
unknown

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comp(4210..4294)
DNA (85bp)
transferRNA
DolJOral78_scaffold_2362_4
unknown

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comp(4273..4590)
DNA (318bp) protein (106aa)

This feature has no annotations

DolJOral78_scaffold_2362_5
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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4736..4966
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B33A8A
PilZ domain-containing protein {ECO:0000313|EMBL:EIM64228.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desul
DolJOral78_scaffold_2362_trna_2
unknown

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comp(5047..5130)
DNA (84bp)
transferRNA
DolJOral78_scaffold_2362_6
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5467..6396
DNA (930bp) protein (310aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=651182 species="Bacteria; Proteobacter
riboflavin biosynthesis protein RibF n=1 Tax=Desulfospira joergensenii RepID=UPI0003B3EA92
ribF; riboflavin biosynthesis bifunctional riboflavin kinase/FMN adenylyltransferase
DolJOral78_scaffold_2362_7
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6398..6964
DNA (567bp) protein (189aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def; peptide deformylase Def (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B3F2_9DELT
DolJOral78_scaffold_2362_8
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7008..7928
DNA (921bp) protein (307aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=879212 species="B
fmt; methionyl-tRNA formyltransferase Fmt (EC:2.1.2.9)
methionyl-tRNA formyltransferase n=1 Tax=Desulfobacter curvatus RepID=UPI00036683DF
DolJOral78_scaffold_2362_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7944..9332
DNA (1389bp) protein (463aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00274011};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desul
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000363D5DB
rsmB; ribosomal RNA small subunit methyltransferase B RsmB
DolJOral78_scaffold_2362_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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9347..9997
DNA (651bp) protein (217aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Des
rpe; ribulose-phosphate 3-epimerase Rpe (EC:5.1.3.1)
ribulose-phosphate 3-epimerase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B6CE93
DolJOral78_scaffold_2362_11
Desulfococcus multivorans, Desulfococcus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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10078..10986
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7U1J1_DESML
Uncharacterized protein {ECO:0000313|EMBL:EPR42885.1}; TaxID=1121405 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfococcus.;" source="Desulfococc
protein of unknown function DUF6 transmembrane
DolJOral78_scaffold_2362_12
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11006..11761)
DNA (756bp) protein (252aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltapr
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC (EC:2.3.1.51)
1-acylglycerol-3-phosphate O-acyltransferase n=1 Tax=Desulfobacter curvatus RepID=UPI000360DEDC rbh
DolJOral78_scaffold_2362_13
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(11815..12600)
DNA (786bp) protein (262aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; methionine aminopeptidase Map (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B6E2_9DELT
DolJOral78_scaffold_2362_14
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(12714..14027)
DNA (1314bp) protein (438aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NFF5_DESTT rbh
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB
DolJOral78_scaffold_2362_15
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(14068..14307)
DNA (240bp) protein (80aa)
Conserved uncharacterized protein n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0N6N5_DESTT
hypothetical protein Tax=RifOxyA12_full_Desulfobacula_46_16_curated
hypothetical protein
DolJOral78_scaffold_2362_16
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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14447..16180
DNA (1734bp) protein (578aa)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B6D9_9DELT
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:EIM65052.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;
recJ; single-stranded-DNA-specific exonuclease RecJ
DolJOral78_scaffold_2362_17
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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16267..16695
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036B3C33
Uncharacterized protein {ECO:0000313|EMBL:EIM63943.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_2362_18
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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16896..17237
DNA (342bp) protein (114aa)
UPF0251 protein DespoDRAFT_00121 n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AY54_9DELT
UPF0251 protein DespoDRAFT_00121 {ECO:0000256|HAMAP-Rule:MF_00674}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source=
hypothetical protein
DolJOral78_scaffold_2362_19
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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17250..17564
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G5E7_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EMS79682.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;" source="Desulfotign
DolJOral78_scaffold_2362_20
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18013..19440)
DNA (1428bp) protein (476aa)
Cobyrinic acid A,C-diamide synthase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B1F3_9DELT
cobB; cobyrinic acid a,c-diamide synthase CobB Tax=RifOxyA12_full_Desulfobacula_46_16_curated
cobB; cobyrinic acid a,c-diamide synthase CobB
DolJOral78_scaffold_2362_21
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19456..19713)
DNA (258bp) protein (86aa)
Dissimilatory sulfite reductase subunit delta DsrD {ECO:0000313|EMBL:EMS79846.1}; EC=1.8.99.3 {ECO:0000313|EMBL:EMS79846.1};; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desu
Dissimilatory sulfite reductase subunit delta DsrD n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0G647_9DELT
dsrD; sulfite reductase, dissimilatory-type subunit delta
DolJOral78_scaffold_2362_22
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(19812..20345)
DNA (534bp) protein (178aa)
dsrB; sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3)
DsrB: sulfite reductase, dissimilatory-type, beta subunit {ECO:0000313|EMBL:CCK78726.1}; EC=1.8.99.3 {ECO:0000313|EMBL:CCK78726.1};; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria
DsrB: sulfite reductase, dissimilatory-type, beta subunit n=1 Tax=Desulfobacula toluolica (strain DSM 7467 / Tol2) RepID=K0NCW7_DESTT
Displaying 25 items

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