ggKbase home page

DolJOral78_scaffold_2523

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2523_1
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..947)
DNA (945bp) protein (315aa)
Putative sensor with HAMP domain n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LMY0_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:KJS32895.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
sensor protein
DolJOral78_scaffold_2523_2
unknown

Not on your lists

comp(987..1370)
DNA (384bp) protein (128aa)

This feature has no annotations

DolJOral78_scaffold_2523_3
unknown

Not on your lists

1520..1867
DNA (348bp) protein (116aa)

This feature has no annotations

DolJOral78_scaffold_2523_trna_1
unknown

Not on your lists

comp(2349..2442)
DNA (94bp)
transferRNA
DolJOral78_scaffold_2523_4
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2560..3204
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B37538
K+ transport system, NAD-binding component {ECO:0000313|EMBL:EMS80660.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfotignum.;"
hypothetical protein
DolJOral78_scaffold_2523_5
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3344..4489
DNA (1146bp) protein (382aa)
pepT; tripeptide aminopeptidase (peptidase T) PepT (EC:3.4.11.4)
peptidase T n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4C8D7 rbh
Peptidase T-like protein {ECO:0000313|EMBL:EIM64948.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobact
DolJOral78_scaffold_2523_6
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4486..5757
DNA (1272bp) protein (424aa)
UPF0272 protein DespoDRAFT_03159 n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B636_9DELT
UPF0272 protein DespoDRAFT_03159 {ECO:0000256|HAMAP-Rule:MF_01074}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source=
hypothetical protein
DolJOral78_scaffold_2523_7
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5738..6214
DNA (477bp) protein (159aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=87921
pgpA; protein PgpA (EC:3.1.3.27)
phosphohistidine phosphatase n=1 Tax=Desulfobacter curvatus RepID=UPI000382E857
DolJOral78_scaffold_2523_8
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6254..7294
DNA (1041bp) protein (347aa)
recombinase RecA n=1 Tax=Desulfobacter curvatus RepID=UPI00036F4F29 rbh
recA; recombinase A RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=651182 species="Bacteria; Proteobac
DolJOral78_scaffold_2523_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7410..10031
DNA (2622bp) protein (874aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015689}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00015673};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanyl-tRNA synthetase AlaS (EC:6.1.1.7)
alanyl-tRNA synthetase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B775DC rbh
DolJOral78_scaffold_2523_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10028..11056
DNA (1029bp) protein (343aa)
peptide ABC transporter permease n=1 Tax=Desulfobacter curvatus RepID=UPI000378C193
ABC-type uncharacterized transport system, permease component {ECO:0000313|EMBL:EIM64953.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae;
oppB; oligopeptide transport system, permease OppB
DolJOral78_scaffold_2523_11
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11056..12102
DNA (1047bp) protein (349aa)
peptide ABC transporter permease n=1 Tax=Desulfospira joergensenii RepID=UPI0003B33AAD rbh
Microcin C inner membrane ABC transporter permease protein YejE {ECO:0000313|EMBL:EMS79227.1}; TaxID=1286635 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacterace
oppC; oligopeptide transport system, permease OppC
DolJOral78_scaffold_2523_12
unknown

Not on your lists

12302..13078
DNA (777bp) protein (259aa)

This feature has no annotations

DolJOral78_scaffold_2523_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13294..14430)
DNA (1137bp) protein (379aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:ACU62185.1}; EC=5.1.3.14 {ECO:0000313|EMBL:ACU62185.1};; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chit
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Eudoraea adriatica RepID=UPI0003773411
UDP-N-acetylglucosamine 2-epimerase
DolJOral78_scaffold_2523_14
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14423..15553)
DNA (1131bp) protein (377aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CJ75_SYNLT
NAD-dependent epimerase/dehydratase
Tax=BJP_IG2157_Clostridiales_35_16
DolJOral78_scaffold_2523_15
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15541..16560)
DNA (1020bp) protein (340aa)
Putative nucleoside-diphosphate sugar epimerase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FLH6_9CLOT rbh
Putative nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:EMS71171.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Cl
polysaccharide biosynthesis protein CapD
DolJOral78_scaffold_2523_16
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17165..18823
DNA (1659bp) protein (553aa)
Fe-S oxidoreductase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B3E7_9DELT rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:EIM64010.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter po
cobalamin-binding radical SAM protein
DolJOral78_scaffold_2523_17
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18854..19351)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI00036063ED
Nuclease-like protein {ECO:0000313|EMBL:EIC23379.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodovibrio.;" source="Thiorhodovibrio sp. 97
NERD domain-containing protein
Displaying 18 items

View Taxonomy