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DolJOral78_scaffold_5500

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_5500_1
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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3..887
-----------------
DNA (885bp)
protein (295aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Desulfobacter curvatus RepID=UPI000361AA4C
DolJOral78_scaffold_5500_2
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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893..1249
-----------------
DNA (357bp)
protein (119aa)
50S ribosomal protein L17 n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4C4_9DELT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae;
rplQ; 50S ribosomal protein L17 RplQ
DolJOral78_scaffold_5500_3
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1429..2487)
-----------------
DNA (1059bp)
protein (353aa)
diguanylate cyclase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B64332
putative reponse regulator (CheY and GGDEF domain family protein) Tax=RifOxyA12_full_Desulfobacula_46_16_curated
putative reponse regulator (CheY and GGDEF domain family protein)
DolJOral78_scaffold_5500_4
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2667..3650)
-----------------
DNA (984bp)
protein (328aa)
Cyclic pyranopterin monophosphate synthase {ECO:0000256|HAMAP-Rule:MF_01225}; EC=4.1.99.18 {ECO:0000256|HAMAP-Rule:MF_01225};; Molybdenum cofactor biosynthesis protein A {ECO:0000256|HAMAP-Rule:MF_012
molybdenum cofactor biosynthesis protein MoeA n=1 Tax=Desulfobacter curvatus RepID=UPI0003775038
moaA; molybdenum cofactor biosynthesis protein A MoaA
DolJOral78_scaffold_5500_5
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3666..5195)
-----------------
DNA (1530bp)
protein (510aa)
cobA; uroporphyrinogen-III C-methyltransferase CobA (EC:2.1.1.107)
Uroporphyrin-III C-methyltransferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4C7_9DELT
Uroporphyrin-III C-methyltransferase {ECO:0000313|EMBL:EIM64340.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source=
DolJOral78_scaffold_5500_6
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5185..6117)
-----------------
DNA (933bp)
protein (311aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase HemC (EC:2.5.1.61)
porphobilinogen deaminase n=1 Tax=Desulfobacter curvatus RepID=UPI00036AF5DD
DolJOral78_scaffold_5500_7
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6125..6373)
-----------------
DNA (249bp)
protein (83aa)
Putative regulatory protein, FmdB family n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4C9_9DELT
Putative regulatory protein, FmdB family {ECO:0000313|EMBL:EIM64342.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" sou
FmdB family regulatory protein
DolJOral78_scaffold_5500_8
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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6598..7086
-----------------
DNA (489bp)
protein (163aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (MECPS) IspF (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B4E5_9DELT
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
DolJOral78_scaffold_5500_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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7196..8629
-----------------
DNA (1434bp)
protein (478aa)
Cysteine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043703}; EC=6.1.1.16 {ECO:0000256|HAMAP-Rule:MF_00041, ECO:0000256|SAAS:SAAS00043714};; Cysteinyl-tRNA synthetase {ECO:00
cysS; cysteinyl-tRNA synthetase CysS (EC:6.1.1.16)
cysteinyl-tRNA synthetase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B76366
DolJOral78_scaffold_5500_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8693..10375)
-----------------
DNA (1683bp)
protein (561aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:
glnS; glutaminyl-tRNA synthetase GlnS (EC:6.1.1.18)
glutaminyl-tRNA synthetase n=1 Tax=Desulfobacter curvatus RepID=UPI000364277D
Displaying 10 items

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