ggKbase home page

DolJOral78_scaffold_2187

Search features with annotation key words

Displaying items 1-30 of 32 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2187_1
Desulfomicrobium baculatum, Desulfomicrobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(190..1170)
DNA (981bp) protein (327aa)
GDP-L-fucose synthase {ECO:0000256|HAMAP-Rule:MF_00956}; EC=1.1.1.271 {ECO:0000256|HAMAP-Rule:MF_00956};; GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase-4-reductase {ECO:0000256|HAMAP-Rule:MF_00956}; Flag
GDP-L-fucose synthase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B49C89 rbh
NAD-dependent epimerase/dehydratase
DolJOral78_scaffold_2187_2
Desulfotignum phosphitoxidans, Desulfotignum, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1227..2318)
DNA (1092bp) protein (364aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=1286635 species="Bacte
GDP-mannose 4,6-dehydratase n=1 Tax=Desulfospira joergensenii RepID=UPI0003B2FC7A rbh
GDP-mannose 4,6-dehydratase
DolJOral78_scaffold_2187_3
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2356..3468)
DNA (1113bp) protein (371aa)
wecB; protein WecB (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B288_9DELT rbh
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:EIM63601.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulf
DolJOral78_scaffold_2187_4
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3577..4716)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000375F9D3
ATPase AAA; K02450 general secretion pathway protein A Tax=CG_Delta_06
ATPase AAA
DolJOral78_scaffold_2187_5
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4721..5539)
DNA (819bp) protein (273aa)
non-specific protein-tyrosine kinase (EC:2.7.10.2); K08253 non-specific protein-tyrosine kinase [EC:2.7.10.2] Tax=CG_Delta_06
Protein tyrosine kinase n=2 Tax=Geobacter metallireducens RepID=Q39VP3_GEOMG
protein tyrosine kinase
DolJOral78_scaffold_2187_6
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5562..7169)
DNA (1608bp) protein (536aa)
lipopolysaccharide biosynthesis protein Tax=CG_Delta_06
chain-length determining protein
Lipopolysaccharide biosynthesis protein id=2454051 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
DolJOral78_scaffold_2187_7
Smithella sp. SC_K08D17, Smithella, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7169..8440)
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4P1_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:KIE18636.1}; TaxID=1487949 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophaceae; Smithella.;" source="Smithella sp. SC_K
hypothetical protein
DolJOral78_scaffold_2187_8
Desulfatitalea sp. BRH_c12, Desulfatitalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8445..9050)
DNA (606bp) protein (202aa)
Polysaccharide export protein n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5G4P2_GEOUR
Uncharacterized protein {ECO:0000313|EMBL:KJS31501.1}; TaxID=1629708 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfatitalea.;" source="Desulfatit
polysaccharide export protein
DolJOral78_scaffold_2187_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9854..13321)
DNA (3468bp) protein (1156aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacter
pyruvate carboxylase (EC:6.4.1.1)
pyruvate carboxylase n=1 Tax=Desulfobacter curvatus RepID=UPI00036927BC rbh
DolJOral78_scaffold_2187_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13552..14757
DNA (1206bp) protein (402aa)
RNA methyltransferase n=1 Tax=Desulfobacter curvatus RepID=UPI00037DA37B rbh
Putative N6-adenine-specific DNA methylase {ECO:0000313|EMBL:EIM62319.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
RNA methylase
DolJOral78_scaffold_2187_11
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14774..17782
DNA (3009bp) protein (1003aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003607CFB rbh
pyruvate phosphate dikinase
Predicted pyruvate phosphate dikinase, PEP/pyruvate-binding {ECO:0000313|EMBL:CCK82135.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; D
DolJOral78_scaffold_2187_12
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18042..20258)
DNA (2217bp) protein (739aa)
isocitrate dehydrogenase (EC:1.1.1.42)
isocitrate dehydrogenase n=1 Tax=Desulfobacter curvatus RepID=UPI0003701E9E rbh
Isocitrate dehydrogenase, NADP-dependent, monomeric type {ECO:0000313|EMBL:EIM62322.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desu
DolJOral78_scaffold_2187_13
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20555..21514
DNA (960bp) protein (320aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYL0_9DELT rbh
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EIM62323.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" so
glycerate dehydrogenase
DolJOral78_scaffold_2187_14
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21554..22246
DNA (693bp) protein (231aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase PanB (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYL4_9DELT rbh
DolJOral78_scaffold_2187_15
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22185..23126
DNA (942bp) protein (314aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYL5_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM62328.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
NADP oxidoreductase, coenzyme F420-dependent
DolJOral78_scaffold_2187_16
bacterium UASB270, Bacteria

Not on your lists

comp(23157..24242)
DNA (1086bp) protein (362aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00038130D7 rbh
Permease {ECO:0000313|EMBL:GAK57703.1}; TaxID=1499967 species="Bacteria.;" source="bacterium UASB270.;"
permease
DolJOral78_scaffold_2187_17
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24399..24752)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000382D280
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:CCK78392.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" sourc
DolJOral78_scaffold_2187_18
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24766..27750)
DNA (2985bp) protein (995aa)
peptidase M16 n=1 Tax=Desulfobacter curvatus RepID=UPI00035CCA77 rbh
Putative Zn-dependent peptidase, insulinase {ECO:0000313|EMBL:EIM62329.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;"
metalloprotease, M16 family
DolJOral78_scaffold_2187_19
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28035..28394)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036D08E5
Uncharacterized protein {ECO:0000313|EMBL:EIM62330.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_2187_20
unknown

Not on your lists

28587..28859
DNA (273bp) protein (91aa)

This feature has no annotations

DolJOral78_scaffold_2187_21
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


28856..29707
DNA (852bp) protein (284aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
rsmA; ribosomal RNA small subunit methyltransferase A RsmA (EC:2.1.1.-)
16S rRNA methyltransferase n=1 Tax=Desulfobacter curvatus RepID=UPI0003765456 rbh
DolJOral78_scaffold_2187_22
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29704..31107
DNA (1404bp) protein (468aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000363963E rbh
HD-GYP domain-containing protein {ECO:0000313|EMBL:EIM62332.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Des
hypothetical protein
DolJOral78_scaffold_2187_23
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31498..32640
DNA (1143bp) protein (381aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; carbamoyl-phosphate synthase subunit CarA (EC:6.3.5.5)
carbamoyl phosphate synthase small subunit n=1 Tax=Desulfobacter curvatus RepID=UPI000370DAD7 rbh
DolJOral78_scaffold_2187_24
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32627..35851
DNA (3225bp) protein (1075aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria;
carB2; carbamoyl-phosphate synthase subunit CarB (EC:6.3.5.5)
carbamoyl phosphate synthase large subunit n=1 Tax=Desulfobacter curvatus RepID=UPI0003732526 rbh
DolJOral78_scaffold_2187_25
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35870..37321
DNA (1452bp) protein (484aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
purF2; amidophosphoribosyltransferase PurF2 (EC:2.4.2.14)
amidophosphoribosyltransferase n=1 Tax=Desulfobacter curvatus RepID=UPI000379837F rbh
DolJOral78_scaffold_2187_26
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37323..38318
DNA (996bp) protein (332aa)
Putative Fe-S oxidoreductase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYJ9_9DELT rbh
Putative Fe-S oxidoreductase {ECO:0000313|EMBL:EIM62312.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfo
molybdenum cofactor biosynthesis protein
DolJOral78_scaffold_2187_27
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38330..38710
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B634_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIM64947.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
DolJOral78_scaffold_2187_28
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38798..40585
DNA (1788bp) protein (596aa)
methyl-accepting chemotaxis protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4C3DB rbh
methyl-accepting chemotaxis protein rbh
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:ACN14027.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" sourc
DolJOral78_scaffold_2187_29
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

40779..43022
DNA (2244bp) protein (748aa)
CRISPR-associated helicase, Cas3 family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PES3_DESSD rbh
CRISPR-associated helicase, Cas3 family
CRISPR-associated helicase, Cas3 family {ECO:0000313|EMBL:AGF80047.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source
DolJOral78_scaffold_2187_30
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

43036..43785
DNA (750bp) protein (250aa)
CRISPR-associated protein, Cas5d family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PUP5_DESSD rbh
CRISPR-associated protein, Cas5d family
CRISPR-associated protein, Cas5d family {ECO:0000313|EMBL:AGF80046.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source
Displaying items 1-30 of 32 in total

View Taxonomy