ggKbase home page

DolJOral78_scaffold_2278

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_2278_trna_2
unknown

Not on your lists

comp(216..294)
DNA (79bp)
transferRNA
DolJOral78_scaffold_2278_trna_1
unknown

Not on your lists

comp(301..372)
DNA (72bp)
transferRNA
DolJOral78_scaffold_2278_1
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(544..1188)
DNA (645bp) protein (215aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfo
talC; transaldolase TalC (EC:2.2.1.2)
transaldolase n=1 Tax=Desulfobacter curvatus RepID=UPI00038197FC rbh
DolJOral78_scaffold_2278_2
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1172..1717)
DNA (546bp) protein (182aa)
folK; 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase FolK (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Desulfobacter curvatus RepID=UPI00037CB24E rbh
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:EIM63115.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacter
DolJOral78_scaffold_2278_3
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1704..2147)
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003680D9E
Uncharacterized protein {ECO:0000313|EMBL:EIM63114.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_2278_4
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2144..3523)
DNA (1380bp) protein (460aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argH; argininosuccinate lyase ArgH (EC:4.3.2.1)
argininosuccinate lyase n=1 Tax=Desulfobacter curvatus RepID=UPI00036C42C8 rbh
DolJOral78_scaffold_2278_5
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3561..4484)
DNA (924bp) protein (308aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
argF; ornithine carbamoyltransferase ArgF (EC:2.1.3.3)
ornithine carbamoyltransferase n=1 Tax=Desulfobacter curvatus RepID=UPI0003784CCA rbh
DolJOral78_scaffold_2278_6
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4481..5677)
DNA (1197bp) protein (399aa)
Acetylornithine aminotransferase {ECO:0000256|HAMAP-Rule:MF_01107}; Short=ACOAT {ECO:0000256|HAMAP-Rule:MF_01107};; EC=2.6.1.11 {ECO:0000256|HAMAP-Rule:MF_01107};; TaxID=879212 species="Bacteria; Prot
argD; acetylornithine aminotransferase ArgD (EC:2.6.1.11)
Acetylornithine aminotransferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0U8_9DELT rbh
DolJOral78_scaffold_2278_7
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5751..6653)
DNA (903bp) protein (301aa)
Acetylglutamate kinase {ECO:0000256|SAAS:SAAS00245375}; EC=2.7.2.- {ECO:0000256|SAAS:SAAS00277142};; EC=2.7.2.8 {ECO:0000256|SAAS:SAAS00245383};; TaxID=879212 species="Bacteria; Proteobacteria; Deltap
argB; acetylglutamate kinase ArgB (EC:2.7.2.8)
acetylglutamate kinase n=1 Tax=Desulfobacter curvatus RepID=UPI00037A4816 rbh
DolJOral78_scaffold_2278_8
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6650..8014)
DNA (1365bp) protein (455aa)
ATP-dependent protease n=1 Tax=Desulfobacter curvatus RepID=UPI000378E3C2 rbh
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=879212 species="Bacteria; Proteobac
hslU; ATP-dependent hsl protease, ATP-binding subunit HslU
DolJOral78_scaffold_2278_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8034..8576)
DNA (543bp) protein (181aa)
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=879212 specie
peptidase n=1 Tax=Desulfobacter curvatus RepID=UPI00037373BF rbh
hslV; ATP-dependent protease HslV
DolJOral78_scaffold_2278_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8767..9663)
DNA (897bp) protein (299aa)
Tyrosine recombinase XerC n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0U4_9DELT rbh
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulf
xerC2; tyrosine recombinase subunit C XerC2
DolJOral78_scaffold_2278_11
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9660..10274)
DNA (615bp) protein (205aa)
Uracil-DNA glycosylase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0U3_9DELT rbh
Uracil-DNA glycosylase {ECO:0000313|EMBL:EIM63106.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter
uracil DNA glycolyase superfamily protein
DolJOral78_scaffold_2278_12
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10255..11457)
DNA (1203bp) protein (401aa)
peptidase ClpP n=1 Tax=Desulfobacter curvatus RepID=UPI00037921FF rbh
Phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase {ECO:0000313|EMBL:EIM63105.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; De
coaBC; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
DolJOral78_scaffold_2278_13
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11441..11959)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036F020E
Uncharacterized protein {ECO:0000313|EMBL:EIM63104.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
lipoprotein
DolJOral78_scaffold_2278_14
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12058..13344)
DNA (1287bp) protein (429aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0U0_9DELT rbh
thiC; thiamine biosynthesis protein ThiC
DolJOral78_scaffold_2278_15
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14119..14727
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00035F65AC rbh
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIM63102.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfoba
fimT; protein FimT
DolJOral78_scaffold_2278_16
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14718..15413
DNA (696bp) protein (232aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B0T8_9DELT rbh
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIM63101.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfoba
prepilin-type cleavage/methylation domain-containing protein
DolJOral78_scaffold_2278_17
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15429..15878
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B4CA33
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIM63100.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfoba
pilV; protein PilV
DolJOral78_scaffold_2278_18
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15878..16378
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B31527
Uncharacterized protein {ECO:0000313|EMBL:EIM63099.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
hypothetical protein
DolJOral78_scaffold_2278_19
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16412..20113
DNA (3702bp) protein (1234aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B778A6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM63098.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
PilY1 protein
DolJOral78_scaffold_2278_20
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20164..20580
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000365AD3A
Uncharacterized protein {ECO:0000313|EMBL:EIM63097.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" s
DolJOral78_scaffold_2278_21
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20855..22588)
DNA (1734bp) protein (578aa)
Xaa-Pro aminopeptidase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B359_9DELT rbh
Xaa-Pro aminopeptidase {ECO:0000313|EMBL:EIM63922.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter
peptidase, M24 family protein
DolJOral78_scaffold_2278_22
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23230..24981)
DNA (1752bp) protein (584aa)
Capsular polysaccharide biosynthesis protein CapD n=1 Tax=Desulfotignum phosphitoxidans DSM 13687 RepID=S0FZF6_9DELT rbh
polysaccharide biosynthesis protein CapD Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
polysaccharide biosynthesis protein CapD
Displaying 24 items

View Taxonomy