ggKbase home page

DolJOral78_scaffold_3103

Search features with annotation key words

Displaying 27 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_3103_1
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


229..423
DNA (195bp) protein (65aa)
50S ribosomal protein L28 n=1 Tax=Desulfobacter curvatus RepID=UPI00036225F4
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulf
rpmB; 50S ribosomal protein L28 RpmB
DolJOral78_scaffold_3103_2
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

875..1525
DNA (651bp) protein (217aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00037D5A70 rbh
Contig_21, whole genome shotgun sequence {ECO:0000313|EMBL:KIX13717.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
ABC transporter periplasmic protein
DolJOral78_scaffold_3103_3
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1644..2183)
DNA (540bp) protein (180aa)
korC4; 2-oxoglutarate synthase subunit gamma (EC:1.2.7.3)
2-oxoacid:ferredoxin oxidoreductase, gamma subunit n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYD2_9DELT rbh
2-oxoacid:ferredoxin oxidoreductase, gamma subunit {ECO:0000313|EMBL:EIM62245.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobact
DolJOral78_scaffold_3103_4
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2189..3004)
DNA (816bp) protein (272aa)
korB4; 2-oxoglutarate synthase subunit beta (EC:1.2.7.3)
2-oxoacid ferredoxin oxidoreductase subunit beta n=1 Tax=Desulfobacter curvatus RepID=UPI0003819616 rbh
2-oxoacid:ferredoxin oxidoreductase, beta subunit {ECO:0000313|EMBL:EIM62246.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobact
DolJOral78_scaffold_3103_5
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3006..4157)
DNA (1152bp) protein (384aa)
korA4; 2-oxoglutarate synthase subunit alpha (EC:1.2.7.3)
2-oxoacid:ferredoxin oxidoreductase, alpha subunit n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYD4_9DELT rbh
2-oxoacid:ferredoxin oxidoreductase, alpha subunit {ECO:0000313|EMBL:EIM62247.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobac
DolJOral78_scaffold_3103_6
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4161..4376)
DNA (216bp) protein (72aa)
Ferredoxin n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYD5_9DELT
Ferredoxin {ECO:0000313|EMBL:EIM62248.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter postgatei 2
fdx9; 4Fe-4S ferredoxin
DolJOral78_scaffold_3103_7
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4620..5468
DNA (849bp) protein (283aa)
Glycosyl transferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYD6_9DELT rbh
Glycosyl transferase {ECO:0000313|EMBL:EIM62249.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter p
glycosyl transferase, family II
DolJOral78_scaffold_3103_8
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5687..6913
DNA (1227bp) protein (409aa)
Putative flavoprotein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYD7_9DELT rbh
Putative flavoprotein {ECO:0000313|EMBL:EIM62250.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacter
norV; protein NorV
DolJOral78_scaffold_3103_9
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6992..8464
DNA (1473bp) protein (491aa)
Ketol-acid reductoisomerase {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00185580}; EC=1.1.1.86 {ECO:0000256|HAMAP-Rule:MF_00435, ECO:0000256|SAAS:SAAS00051427};; Acetohydroxy-acid isomerore
ilvC; ketol-acid reductoisomerase (EC:1.1.1.86)
ketol-acid reductoisomerase n=1 Tax=Desulfobacter curvatus RepID=UPI00037927CB rbh
DolJOral78_scaffold_3103_10
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8595..10037)
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000375E41E rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM62236.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_3103_11
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10037..10492)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYC4_9DELT
Uncharacterized protein {ECO:0000313|EMBL:EIM62237.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_3103_12
Desulfobacula toluolica, Desulfobacula, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10915..11508
DNA (594bp) protein (198aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000373EFAA
hypothetical protein
Conserved uncharacterized protein {ECO:0000313|EMBL:CCK80827.1}; TaxID=651182 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacula.;" source="De
DolJOral78_scaffold_3103_13
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11642..12805)
DNA (1164bp) protein (388aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00570, ECO:0000256|RuleBase:RU003838}; Short=NAPRTase {ECO:0000256|HAMAP-Rule:MF_00570};; EC=6.3.4.21 {ECO:0000256|HAMAP-Rule:MF_00570,
pncB; Nicotinate phosphoribosyltransferase (NAPRTase) PncB (EC:2.4.2.11)
Nicotinate phosphoribosyltransferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5AYM1_9DELT rbh
DolJOral78_scaffold_3103_14
RifOxyA12_full_Desulfobacterales_46_15_curated, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13321..13767)
DNA (447bp) protein (149aa)
hypothetical protein n=1 Tax=Desulfospira joergensenii RepID=UPI0003B486C2
hypothetical protein Tax=RifOxyA12_full_Desulfobacterales_46_15_curated
conserved membrane protein of unknown function
DolJOral78_scaffold_3103_15
RBG_13_Nitrospirae_39_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(13911..14513)
DNA (603bp) protein (201aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI0003690ECF rbh
TetR family transcriptional regulator Tax=RBG_13_Nitrospirae_39_12_curated
regulatory protein TetR
DolJOral78_scaffold_3103_16
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14749..14958
DNA (210bp) protein (70aa)
30S ribosomal protein S21 n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B5S3_9DELT
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulf
rpsU; 30S ribosomal protein S21 RspU
DolJOral78_scaffold_3103_17
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15024..16319
DNA (1296bp) protein (432aa)
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
folylpolyglutamate synthase/dihydrofolate synthase n=1 Tax=Desulfobacter curvatus RepID=UPI000375523E rbh
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:EIM64835.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobac
DolJOral78_scaffold_3103_18
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16387..17148
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B099_9DELT rbh
Uncharacterized protein {ECO:0000313|EMBL:EIM62912.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
alpha/beta hydrolase fold protein
DolJOral78_scaffold_3103_19
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17237..18163)
DNA (927bp) protein (309aa)
metal-dependent phosphoesterase n=1 Tax=Desulfobacter curvatus RepID=UPI00035E507A rbh
Putative metal-dependent phosphoesterase, PHP family {ECO:0000313|EMBL:EIM63984.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfob
PHP domain-containing protein
DolJOral78_scaffold_3103_20
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18366..20309
DNA (1944bp) protein (648aa)
pckG; phosphoenolpyruvate carboxykinase PckG (EC:4.1.1.32)
Phosphoenolpyruvate carboxykinase (GTP) n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B3C0_9DELT rbh
Phosphoenolpyruvate carboxykinase (GTP) {ECO:0000313|EMBL:EIM63983.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" sour
DolJOral78_scaffold_3103_21
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20640..21479
DNA (840bp) protein (280aa)
2-polyprenylphenol hydroxylase-like oxidoreductase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B3B8_9DELT rbh
2-polyprenylphenol hydroxylase-like oxidoreductase {ECO:0000313|EMBL:EIM63981.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobac
oxidotreductase FAD/NAD(P)-binding domain-containing protein
DolJOral78_scaffold_3103_22
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21511..22914
DNA (1404bp) protein (468aa)
gltD; glutamate synthase small subunit GltD (EC:1.4.1.13)
dihydropyrimidine dehydrogenase subunit A n=1 Tax=Desulfobacter curvatus RepID=UPI00037E0378 rbh
NADPH-dependent glutamate synthase, homotetrameric {ECO:0000313|EMBL:EIM63980.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobac
DolJOral78_scaffold_3103_23
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23086..23277)
DNA (192bp) protein (64aa)
Putative RNA-binding protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B3B6_9DELT
Putative RNA-binding protein {ECO:0000313|EMBL:EIM63979.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfo
hypothetical protein
DolJOral78_scaffold_3103_24
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23358..23768)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI00036E5F9B
Uncharacterized protein {ECO:0000313|EMBL:EIM63978.1}; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacter.;" source="Desulfobacte
hypothetical protein
DolJOral78_scaffold_3103_25
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23941..24543)
DNA (603bp) protein (201aa)
Thymidylate kinase {ECO:0000256|HAMAP-Rule:MF_00165}; EC=2.7.4.9 {ECO:0000256|HAMAP-Rule:MF_00165};; dTMP kinase {ECO:0000256|HAMAP-Rule:MF_00165}; TaxID=879212 species="Bacteria; Proteobacteria; Delt
Thymidylate kinase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B3B4_9DELT rbh
thymidylate kinase
DolJOral78_scaffold_3103_26
Desulfobacter postgatei, Desulfobacter, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24788..25651)
DNA (864bp) protein (288aa)
Class III cytochrome C family protein n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B3B3_9DELT rbh
Class III cytochrome C family protein {ECO:0000313|EMBL:EIM63976.1}; Flags: Precursor;; TaxID=879212 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desu
cytochrome C class III
DolJOral78_scaffold_3103_27
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25893..26615)
DNA (723bp) protein (241aa)
putative anthranilate synthase component II (EC:4.1.3.27)
Putative anthranilate synthase component II {ECO:0000313|EMBL:ACN15256.1}; EC=4.1.3.27 {ECO:0000313|EMBL:ACN15256.1};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacte
hypothetical protein n=1 Tax=Desulfobacter curvatus RepID=UPI000380C03B rbh
Displaying 27 items

View Taxonomy