ggKbase home page

DolJOral78_scaffold_129

Search features with annotation key words

Displaying items 1-30 of 99 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_129_1
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(277..2067)
DNA (1791bp) protein (597aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Cand
dihydrolipoamide dehydrogenase n=1 Tax=Azoarcus toluclasticus RepID=UPI0003691B5C rbh
dihydrolipoamide dehydrogenase
DolJOral78_scaffold_129_2
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2077..3711)
DNA (1635bp) protein (545aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaprote
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase (EC:2.3.1.61)
Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase n=1 Tax=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) RepID=Q0AC12_ALKEH rbh
DolJOral78_scaffold_129_3
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3725..6388)
DNA (2664bp) protein (888aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacterace
Pyruvate dehydrogenase E1 component n=1 Tax=Beggiatoa alba B18LD RepID=I3CE48_9GAMM rbh
pyruvate dehydrogenase E1 component, homodimeric type
DolJOral78_scaffold_129_4
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6467..7525)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4J2V5_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ09921.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
putative permease
DolJOral78_scaffold_129_5
Pseudomonas fulva, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7614..8765)
DNA (1152bp) protein (384aa)
Lipase class 3 n=1 Tax=Pseudomonas fulva (strain 12-X) RepID=F6AAA2_PSEF1
lipase class 3
Lipase class 3 {ECO:0000313|EMBL:AEF24329.1}; TaxID=743720 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fulva (strain 1
DolJOral78_scaffold_129_6
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8787..9215)
DNA (429bp) protein (143aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI00036DEE4D
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAL96520.1}; TaxID=62928 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Azoarcus.;" source="Azoarcus sp. (strain BH72).
DolJOral78_scaffold_129_7
unknown

Not on your lists

comp(9308..9436)
DNA (129bp) protein (43aa)

This feature has no annotations

DolJOral78_scaffold_129_8
Thiorhodococcus sp. AK35, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9769..10110)
DNA (342bp) protein (114aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RW02_ALLVD
Uncharacterized protein {ECO:0000313|EMBL:EXJ14214.1}; TaxID=1249627 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus sp.
Cupin 2 conserved barrel domain-containing protein
DolJOral78_scaffold_129_9
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10208..11062
DNA (855bp) protein (285aa)
Uncharacterized protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LFS1_HALO1
Uncharacterized protein {ECO:0000313|EMBL:CDH47721.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
DolJOral78_scaffold_129_10
unknown

Not on your lists

11551..11721
DNA (171bp) protein (57aa)

This feature has no annotations

DolJOral78_scaffold_129_11
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11899..13578)
DNA (1680bp) protein (560aa)
Putative (RNA-polymerase)-subunit kinase {ECO:0000313|EMBL:CDI02739.1}; EC=2.7.11.23 {ECO:0000313|EMBL:CDI02739.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacter
hypothetical protein n=1 Tax=Massilia niastensis RepID=UPI000379FF87
serine/threonine protein kinase
DolJOral78_scaffold_129_12
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13899..14174
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI02743.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
DolJOral78_scaffold_129_13
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14178..14669
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI02743.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
DolJOral78_scaffold_129_14
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15173..16960
DNA (1788bp) protein (596aa)
Uncharacterized protein {ECO:0000313|EMBL:CDI02744.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
DolJOral78_scaffold_129_15
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17306..19159
DNA (1854bp) protein (618aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS:SAAS00023040}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012, ECO:0000256|SAAS
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
Dihydroxy-acid dehydratase n=2 Tax=Synechococcus elongatus RepID=ILVD_SYNE7 rbh
DolJOral78_scaffold_129_16
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19208..21619
DNA (2412bp) protein (804aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CI32_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH44828.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
diguanylate phosphodiesterase
DolJOral78_scaffold_129_17
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21751..22785
DNA (1035bp) protein (345aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
murB; UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=MURB_AROAE rbh
DolJOral78_scaffold_129_18
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22812..24779)
DNA (1968bp) protein (656aa)
soluble lytic murein transglycosylase (EC:3.2.1.-)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI0003761256 rbh
Putative Lytic transglycosylase catalytic {ECO:0000313|EMBL:CDH44426.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="
DolJOral78_scaffold_129_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24864..25772)
DNA (909bp) protein (303aa)
Soluble lytic murein transglycosylase-like protein n=1 Tax=Beggiatoa alba B18LD RepID=I3CF39_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH44427.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
murein transglycosylase
DolJOral78_scaffold_129_20
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26152..27660
DNA (1509bp) protein (503aa)
UDP-galactose-lipid carrier transferase n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HBY7_9PROT
Putative polyphosphate:AMP phosphotransferase {ECO:0000313|EMBL:CDH44428.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" sour
hypothetical protein
DolJOral78_scaffold_129_21
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27711..29945
DNA (2235bp) protein (745aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=2 Tax=Geobacter metallireducens RepID=Q39ZE2_GEOMG rbh
ppk; polyphosphate kinase
DolJOral78_scaffold_129_22
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30437..31738
DNA (1302bp) protein (434aa)
MmgE/PrpD family protein n=1 Tax=Parvibaculum lavamentivorans (strain DS-1 / DSM 13023 / NCIMB 13966) RepID=A7HXT1_PARL1 rbh
MmgE/PrpD family protein {ECO:0000313|EMBL:CDI01014.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competi
MmgE/PrpD family protein
DolJOral78_scaffold_129_23
unknown

Not on your lists

32198..32320
DNA (123bp) protein (41aa)

This feature has no annotations

DolJOral78_scaffold_129_24
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32388..33068)
DNA (681bp) protein (227aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K630_NITWC rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI01013.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
DolJOral78_scaffold_129_25
unknown

Not on your lists

33814..34134
DNA (321bp) protein (107aa)

This feature has no annotations

DolJOral78_scaffold_129_26
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34374..36137
DNA (1764bp) protein (588aa)
Fumarate reductase flavoprotein subunit {ECO:0000256|RuleBase:RU362050}; EC=1.3.5.4 {ECO:0000256|RuleBase:RU362050};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacte
Fumarate reductase flavoprotein subunit n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SHG3_PHAFV rbh
fumarate reductase flavoprotein subunit
DolJOral78_scaffold_129_27
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36134..36877
DNA (744bp) protein (248aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competib
frdBC; putative fumarate reductase; K00245 fumarate reductase iron-sulfur subunit [EC:1.3.99.1] id=14424438 bin=bin1_lowGC species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP rbh
succinate dehydrogenase iron-sulfur protein
DolJOral78_scaffold_129_28
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36874..37263
DNA (390bp) protein (130aa)
Fumarate reductase subunit C n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HKG5_9PROT
Fumarate reductase subunit C {ECO:0000256|SAAS:SAAS00095967}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus
fumarate reductase subunit C
DolJOral78_scaffold_129_29
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37266..37607
DNA (342bp) protein (114aa)
Fumarate reductase subunit D n=1 Tax=Caenispirillum salinarum AK4 RepID=K9H1C2_9PROT
Putative Fumarate reductase subunit D {ECO:0000313|EMBL:CDH44280.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Cand
fumarate reductase subunit D
DolJOral78_scaffold_129_30
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37728..38477
DNA (750bp) protein (250aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21SX8_RHOFD rbh
Uncharacterized protein {ECO:0000313|EMBL:CDH44281.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
methyltransferase
Displaying items 1-30 of 99 in total

View Taxonomy