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DolJOral78_scaffold_756

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Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_756_1
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292..2334)
DNA (2043bp) protein (681aa)
K(+)-insensitive pyrophosphate-energized proton pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound proton-translocating pyrophosphatase {ECO:0000256|
K(+)-insensitive pyrophosphate-energized proton pump n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GW03_9GAMM rbh
vacuolar-type H(+)-translocating pyrophosphatase
DolJOral78_scaffold_756_2
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2683..3237)
DNA (555bp) protein (185aa)
Inorganic pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00209}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_00209};; Pyrophosphate phospho-hydrolase {ECO:0000256|HAMAP-Rule:MF_00209}; TaxID=1400861 species="Ba
ppa; inorganic pyrophosphatase (EC:3.6.1.1)
Inorganic pyrophosphatase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B562_9PROT
DolJOral78_scaffold_756_3
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3805..4506)
DNA (702bp) protein (234aa)
High-affinity branched-chain amino acid transport ATP-binding protein n=2 Tax=Bordetella holmesii RepID=M5NSU2_9BORD rbh
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDI00906.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacte
ABC transporter family protein
DolJOral78_scaffold_756_4
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4513..5310)
DNA (798bp) protein (266aa)
L-leucine ABC transporter ATP-binding protein / L-isoleucine ABC transporter ATP-binding protein / L-valine ABC transporter ATP-binding protein n=2 Tax=Burkholderia RepID=A4JJA5_BURVG rbh
Leucine/isoleucine/valine transporter subunit ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDH47814.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacte
livG; leucine/isoleucine/valine transporter ATP-binding subunit
DolJOral78_scaffold_756_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5307..6560)
DNA (1254bp) protein (418aa)
High-affinity branched-chain amino acid ABC transporter, permease protein n=2 Tax=Burkholderia multivorans RepID=B9BRX5_9BURK rbh
Leucine/isoleucine/valine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDH47813.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacterac
livM; leucine/isoleucine/valine transporter permease subunit
DolJOral78_scaffold_756_6
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6564..7496)
DNA (933bp) protein (311aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=Herbaspirillum sp. YR522 RepID=J2W6F8_9BURK rbh
Leucine/isoleucine/valine transporter subunit membrane component of ABC superfamily {ECO:0000313|EMBL:CDH47812.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacterac
ABC transporter permease
DolJOral78_scaffold_756_7
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7840..8961)
DNA (1122bp) protein (374aa)
amino acid ABC transporter substrate-binding protein n=1 Tax=Hahella ganghwensis RepID=UPI0003709E48
Leucine transporter subunit periplasmic-binding component of ABC superfamily {ECO:0000313|EMBL:CDH47811.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Ca
braC; Leucine-, isoleucine-, valine-, threonine-, and alanine-binding protein
DolJOral78_scaffold_756_8
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9114..9551)
DNA (438bp) protein (146aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G4S1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH45967.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
conserved hypothetical protein
DolJOral78_scaffold_756_9
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9552..10190)
DNA (639bp) protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) l
endonuclease III (EC:4.2.99.18)
Endonuclease III n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RNQ2_ALLVD rbh
DolJOral78_scaffold_756_10
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10194..11429)
DNA (1236bp) protein (412aa)
Sensory box protein/GGDEF domain protein n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q607T2_METCA rbh
sensory box protein
Sensory box protein/GGDEF domain protein {ECO:0000313|EMBL:AAU92273.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source=
DolJOral78_scaffold_756_11
Methanosphaerula palustris, Methanosphaerula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(11491..12699)
DNA (1209bp) protein (403aa)
Putative PAS/PAC sensor protein n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) RepID=B8GII3_METPE
PAS/PAC sensor protein
Putative PAS/PAC sensor protein {ECO:0000313|EMBL:ACL15534.1}; TaxID=521011 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanosphaerula.;" source="Methano
DolJOral78_scaffold_756_12
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13428..14414
DNA (987bp) protein (329aa)
Putative quinone oxidoreductase YhdH {ECO:0000313|EMBL:CDH43198.1}; EC=1.6.5.- {ECO:0000313|EMBL:CDH43198.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae;
Zinc-containing alcohol dehydrogenase superfamily n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47J63_DECAR rbh
zinc-containing alcohol dehydrogenase superfamily protein
DolJOral78_scaffold_756_13
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14627..15604)
DNA (978bp) protein (326aa)
LysR family transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALE20 RepID=UPI00036A79EF rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CDH44730.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Can
LysR family transcriptional regulator
DolJOral78_scaffold_756_14
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15782..17545
DNA (1764bp) protein (588aa)
Isocitrate dehydrogenase {ECO:0000313|EMBL:CDI02457.1}; EC=1.1.1.42 {ECO:0000313|EMBL:CDI02457.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus
Isocitrate dehydrogenase, NADP-dependent, prokaryotic type n=1 Tax=Beggiatoa alba B18LD RepID=I3CGN9_9GAMM rbh
isocitrate dehydrogenase, NADP-dependent
DolJOral78_scaffold_756_15
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17751..18191)
DNA (441bp) protein (147aa)
Ferric-uptake regulator n=1 Tax=mine drainage metagenome RepID=T1A655_9ZZZZ
Negative regulator of ferric iron uptake {ECO:0000313|EMBL:CDI03739.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Ca
Ferric uptake transcription regulator (Ferric uptake regulator)
DolJOral78_scaffold_756_16
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18289..18618
DNA (330bp) protein (110aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003604F8D
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus C
SmpA/OmlA domain protein
DolJOral78_scaffold_756_17
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18615..18947)
DNA (333bp) protein (111aa)
RnfH n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000360431B
UPF0125 protein BN874_1100028 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidat
RnfH
DolJOral78_scaffold_756_18
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18934..19371)
DNA (438bp) protein (146aa)
Cyclase/dehydrase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BYY8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH43248.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
cyclase
DolJOral78_scaffold_756_19
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19509..19982
DNA (474bp) protein (158aa)
SsrA-binding protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B5F9AD
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobact
SsrA-binding protein
DolJOral78_scaffold_756_20
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20137..20652
DNA (516bp) protein (172aa)
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064161}; EC=4.2.1.59 {ECO:0000256|HAMAP-Rule:MF_00405, ECO:0000256|SAAS:SAAS00064166};; 3-
3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SXZ8_META2
fabA; beta-hydroxydecanoyl thioester dehydrase
DolJOral78_scaffold_756_21
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20665..21882
DNA (1218bp) protein (406aa)
3-oxoacyl-(Acyl-carrier-protein) synthase I {ECO:0000313|EMBL:CDI01575.1}; EC=2.3.1.41 {ECO:0000313|EMBL:CDI01575.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibact
3-oxoacyl-ACP synthase n=1 Tax=Methylobacter marinus RepID=UPI00037E54D9 rbh
beta-ketoacyl synthase
DolJOral78_scaffold_756_22
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21962..22354
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B39E82
Uncharacterized protein {ECO:0000313|EMBL:CDH43450.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
DolJOral78_scaffold_756_23
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22393..23361
DNA (969bp) protein (323aa)
Thiamine-monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128}; Short=TMP kinase {ECO:0000256|HAMAP-Rule:MF_02128};; Short=Thiamine-phosphate kinase {ECO:0000256|HAMAP-Rule:MF_02128};; EC=2.7.4.16 {E
thiamine-monophosphate kinase (EC:2.7.4.16)
Thiamine-monophosphate kinase n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4IVS8_9GAMM rbh
DolJOral78_scaffold_756_24
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23505..24374
DNA (870bp) protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competiba
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Burkholderia ambifaria MEX-5 RepID=B1SYV8_9BURK rbh
glucose-1-phosphate thymidylyltransferase
DolJOral78_scaffold_756_25
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24386..24943
DNA (558bp) protein (186aa)
dTDP-4-deoxyrhamnose-3,5-epimerase {ECO:0000313|EMBL:CDH43939.1}; EC=5.1.3.13 {ECO:0000313|EMBL:CDH43939.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae;
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Burkholderia cenocepacia (strain HI2424) RepID=A0KDW6_BURCH
DolJOral78_scaffold_756_26
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24947..25822
DNA (876bp) protein (292aa)
dTDP-4-dehydrorhamnose reductase subunit, NAD(P)-binding, of dTDP-L-rhamnose synthase {ECO:0000313|EMBL:CDH43935.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CDH43935.1};; TaxID=1400861 species="Bacteria; Prote
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Burkholderia ambifaria IOP40-10 RepID=B1FP55_9BURK
DolJOral78_scaffold_756_27
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25824..27518
DNA (1695bp) protein (565aa)
General secretory pathway protein E n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BVJ9_NITHN rbh
General secretion pathway protein E {ECO:0000313|EMBL:CDH43934.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candid
general secretory pathway protein E rbh
DolJOral78_scaffold_756_28
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27520..28740
DNA (1221bp) protein (407aa)
Type II secretion system F domain protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC42_NITWC rbh
Type II secretion system protein {ECO:0000313|EMBL:CDH43933.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatu
type II secretion system F domain-containing protein
DolJOral78_scaffold_756_29
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28934..29368
DNA (435bp) protein (145aa)
General secretion pathway protein G n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC41_NITWC
General secretion pathway protein G {ECO:0000313|EMBL:CDI02632.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candida
general secretion pathway protein G
DolJOral78_scaffold_756_30
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29375..29875
DNA (501bp) protein (167aa)
General secretion pathway protein H n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8KC40_NITWC
General secretion pathway protein H {ECO:0000313|EMBL:CDH43931.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candid
general secretion pathway protein H
Displaying items 1-30 of 52 in total

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