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DolJOral78_scaffold_780

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Displaying items 1-30 of 42 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolJOral78_scaffold_780_1
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

232..435
DNA (204bp) protein (68aa)
Transposase IS66 n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BRJ2_9GAMM
transposase IS66
Transposase IS66 {ECO:0000313|EMBL:EIJ33985.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
DolJOral78_scaffold_780_2
Chelonobacter oris, Chelonobacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(451..1404)
DNA (954bp) protein (318aa)
Putative ABC superfamily ATP binding cassette transporter, binding protein n=1 Tax=Avibacterium paragallinarum JF4211 RepID=S6EER7_AVIPA rbh
Thiamine biosynthesis protein {ECO:0000313|EMBL:KGQ71402.1}; TaxID=505317 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Chelonobacter.;" source="Chelonobacte
thiamine biosynthesis protein
DolJOral78_scaffold_780_3
Pasteurella multocida, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1455..2102)
DNA (648bp) protein (216aa)
TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C family protein n=5 Tax=Pasteurella multocida RepID=G7SU80_PASMD
TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C family protein
Uncharacterized protein {ECO:0000313|EMBL:ESQ72387.1}; TaxID=1331042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella.;" source="Pasteurella multoci
DolJOral78_scaffold_780_4
Aggregatibacter segnis, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2121..2906)
DNA (786bp) protein (262aa)
ABC superfamily ATP binding cassette transporter, membrane protein n=1 Tax=Aggregatibacter segnis ATCC 33393 RepID=E6KZ45_9PAST
ABC superfamily ATP binding cassette transporter, membrane protein {ECO:0000313|EMBL:EFU67224.1}; TaxID=888057 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae;
taurine transporter subunit
DolJOral78_scaffold_780_5
Avibacterium paragallinarum, Avibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2903..3604)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Avibacterium paragallinarum JF4211 RepID=S6FFZ0_AVIPA
Uncharacterized protein {ECO:0000313|EMBL:CDF99649.1}; TaxID=1351754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Avibacterium.;" source="Avibacterium parag
hypothetical protein
DolJOral78_scaffold_780_6
Marinomonas sp. MED121, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4419..4952)
DNA (534bp) protein (178aa)
Membrane protein, putative n=1 Tax=Marinomonas sp. MED121 RepID=A3Y4Z0_9GAMM
Membrane protein, putative {ECO:0000313|EMBL:EAQ67769.1}; TaxID=314277 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas sp. MED121.;"
membrane protein
DolJOral78_scaffold_780_trna_1
unknown

Not on your lists

comp(5363..5436)
DNA (74bp)
transferRNA
DolJOral78_scaffold_780_7

Not on your lists

comp(5870..7000)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLC4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD98031.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
arnB2; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase ArnB2
DolJOral78_scaffold_780_8
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7000..8028)
DNA (1029bp) protein (343aa)
dTDP-D-glucose 4,6-dehydratase (EC:4.2.1.46) Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DIZ0_9BACT rbh
NAD-dependent epimerase/dehydratase
DolJOral78_scaffold_780_9
R_Deltaproteobacteria_42_39, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8030..8749)
DNA (720bp) protein (240aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DW49_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Deltaproteobacteria_42_39_curated
hypothetical protein
DolJOral78_scaffold_780_10
R_OP11_Levybacteria_40_10, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(8746..9396)
DNA (651bp) protein (217aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_40_10_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LX44_9FUSO
DolJOral78_scaffold_780_11
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(9402..11231)
DNA (1830bp) protein (610aa)
Asparagine synthetase n=1 Tax=Thermosipho melanesiensis (strain BI429 / DSM 12029) RepID=A6LKC4_THEM4 rbh
asparagine synthase
Tax=BJP_IG2102_ACD39_51_10
DolJOral78_scaffold_780_12
BJP_IG2102_ACD39_51_10, ACD39, Bacteria

Not on your lists

comp(11252..12307)
DNA (1056bp) protein (352aa)
Radical SAM superfamily enzyme n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y0K2_SULBS rbh
radical SAM family protein
Tax=BJP_IG2102_ACD39_51_10
DolJOral78_scaffold_780_13
Sulfurospirillum barnesii, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12297..13319)
DNA (1023bp) protein (341aa)
Radical SAM additional 4Fe4S-binding domain protein n=1 Tax=Sulfurospirillum barnesii (strain ATCC 700032 / DSM 10660 / SES-3) RepID=I3Y0K4_SULBS rbh
radical SAM additional 4Fe4S-binding domain-containing protein
Radical SAM additional 4Fe4S-binding domain protein {ECO:0000313|EMBL:AFL69728.1}; TaxID=760154 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfuro
DolJOral78_scaffold_780_14
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(13358..14686)
DNA (1329bp) protein (443aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q02BK1_SOLUE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABJ81565.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Solibacter usitatu
DolJOral78_scaffold_780_15
Desulfarculus sp. SPR, Desulfarculus, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14706..16358)
DNA (1653bp) protein (551aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HDW3_METFS
Contig_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIX12655.1}; TaxID=1429043 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfarculales; Desulfarculaceae; Desulfarculus.;" source
hypothetical protein
DolJOral78_scaffold_780_16
RBG_16_Chloroflexi_64_43_curated, Chloroflexi, Bacteria

Not on your lists

comp(16405..17811)
DNA (1407bp) protein (469aa)
Glycosyl transferase n=1 Tax=Lyngbya sp. (strain PCC 8106) RepID=A0YTV2_LYNSP
hypothetical protein Tax=RBG_16_Chloroflexi_64_43_curated
probable glycosyl transferase
DolJOral78_scaffold_780_17
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17827..19149)
DNA (1323bp) protein (441aa)
UDP-glucose 6-dehydrogenase (EC:1.1.1.22)
UDP-glucose/GDP-mannose dehydrogenase n=1 Tax=Agrobacterium tumefaciens F2 RepID=F7UBT0_RHIRD
UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:EGP56144.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agr
DolJOral78_scaffold_780_18
Marinobacter santoriniensis, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19570..20268
DNA (699bp) protein (233aa)
Transcriptional Regulator, TetR family protein n=1 Tax=Marinobacter santoriniensis NKSG1 RepID=M7CRM5_9ALTE
transcriptional Regulator, TetR family protein
Transcriptional Regulator, TetR family protein {ECO:0000313|EMBL:EMP55819.1}; TaxID=1288826 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" s
DolJOral78_scaffold_780_19
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20342..20839
DNA (498bp) protein (166aa)
ErfK/YbiS/YcfS/YnhG n=1 Tax=Dechloromonas aromatica (strain RCB) RepID=Q47DZ1_DECAR
L,D-transpeptidase catalytic domain protein {ECO:0000313|EMBL:KFB76565.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumuli
hypothetical protein
DolJOral78_scaffold_780_20
Nitrincola sp. A-D6, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20851..21873
DNA (1023bp) protein (341aa)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:00
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000367F927
glycoside hydrolase
DolJOral78_scaffold_780_21
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21874..23031
DNA (1158bp) protein (386aa)
Small-conductance mechanosensitive channel n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=Q2SIQ6_HAHCH
small-conductance mechanosensitive channel
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:ABC29468.1}; TaxID=349521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Hahella.;" source="Hahell
DolJOral78_scaffold_780_22
Pseudomonas sp. GM24, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23031..23783
DNA (753bp) protein (251aa)
Probable S-methyl-5'-thioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.44 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963};
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
Probable S-methyl-5'-thioinosine phosphorylase n=2 Tax=Pseudomonas RepID=J2N6R0_9PSED rbh
DolJOral78_scaffold_780_23
unknown

Not on your lists

comp(23743..24720)
DNA (978bp) protein (326aa)

This feature has no annotations

DolJOral78_scaffold_780_24
Marinobacter adhaerens, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24695..28249)
DNA (3555bp) protein (1185aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=225937 species="Bacteria; Pr
mfd; transcription-repair-coupling factor (EC:3.6.1.-)
Transcription-repair-coupling factor n=1 Tax=Marinobacter adhaerens (strain HP15) RepID=E4PFV1_MARAH
DolJOral78_scaffold_780_25
Marinobacter salarius, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28502..29953
DNA (1452bp) protein (484aa)
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1420917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonad
Glyceraldehyde-3-phosphate dehydrogenase n=1 Tax=Marinobacter algicola DG893 RepID=A6F0X2_9ALTE
DolJOral78_scaffold_780_26
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30325..31671
DNA (1347bp) protein (449aa)
nqrA; Na(+)-translocating NADH-quinone reductase subunit A (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit A n=1 Tax=Hahella chejuensis (strain KCTC 2396) RepID=NQRA_HAHCH rbh
Na(+)-translocating NADH-quinone reductase subunit A {ECO:0000255|HAMAP-Rule:MF_00425}; Short=Na(+)-NQR subunit A {ECO:0000255|HAMAP-Rule:MF_00425};; Short=Na(+)-translocating NQR subunit A {ECO:00002
DolJOral78_scaffold_780_27
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31674..32882
DNA (1209bp) protein (403aa)
nqrB; Na(+)-translocating NADH-quinone reductase subunit B (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Hahella ganghwensis RepID=UPI00036134A1
Na(+)-translocating NADH-quinone reductase subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; Short=Na(+)-NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; Short=Na(+)-translocating NQR subunit B {ECO:00002
DolJOral78_scaffold_780_28
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32875..33678
DNA (804bp) protein (268aa)
nqrC; Na(+)-translocating NADH-quinone reductase subunit C (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit C n=1 Tax=Hahella ganghwensis RepID=UPI00037E7CDD rbh
Na(+)-translocating NADH-quinone reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Short=Na(+)-NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; Short=Na(+)-translocating NQR subunit C {ECO:00002
DolJOral78_scaffold_780_29
Hahella chejuensis, Hahella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33681..34346
DNA (666bp) protein (222aa)
nqrD; Na(+)-translocating NADH-quinone reductase subunit D (EC:1.6.5.-)
Na(+)-translocating NADH-quinone reductase subunit D n=1 Tax=Hahella ganghwensis RepID=UPI00036B05CF rbh
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00428, ECO:0000256|SAAS:SAAS00170009}; Short=Na(+)-NQR subunit D {ECO:0000256|HAMAP-Rule:MF_00428};; Short=Na(+)-translo
Displaying items 1-30 of 42 in total

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