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DolZOral124_scaffold_2112

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2112_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..1357
-----------------
DNA (1356bp)
protein (452aa)
FMN-binding protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G2S8_CLOPA
FMN-binding protein {ECO:0000313|EMBL:ETD70278.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
FMN-binding domain-containing protein
DolZOral124_scaffold_2112_2
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1614..1811)
-----------------
DNA (198bp)
protein (66aa)
NUDIX domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEL9_CLOBI
NUDIX hydrolase {ECO:0000313|EMBL:KGJ49024.1}; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. NCR.;"
Isopentenyldiphosphate isomerase
DolZOral124_scaffold_2112_3
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1893..2912)
-----------------
DNA (1020bp)
protein (340aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XEQ3_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHL18238.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
hypothetical protein
DolZOral124_scaffold_2112_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3130..4605)
-----------------
DNA (1476bp)
protein (492aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysS; lysyl-tRNA synthetase LysS (EC:6.1.1.6)
Lysine--tRNA ligase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PXB2_CLOSD
DolZOral124_scaffold_2112_5
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4697..5173)
-----------------
DNA (477bp)
protein (159aa)
Transcription elongation factor GreA n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0G9_9FIRM
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=500633 species="Bacteria
greA; transcription elongation factor GreA
DolZOral124_scaffold_2112_6
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5267..6205)
-----------------
DNA (939bp)
protein (313aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Rumi
tRNA-dihydrouridine synthase n=1 Tax=Clostridium termitidis CT1112 RepID=S0FKB3_9CLOT
hypothetical protein
DolZOral124_scaffold_2112_7
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6207..7331)
-----------------
DNA (1125bp)
protein (375aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;"
homoserine dehydrogenase (EC:1.1.1.3)
Homoserine dehydrogenase n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2LBV1_9FIRM
DolZOral124_scaffold_2112_8
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7328..8308)
-----------------
DNA (981bp)
protein (327aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JX27_9FIRM rbh
hypothetical protein
DolZOral124_scaffold_2112_9
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8295..9617)
-----------------
DNA (1323bp)
protein (441aa)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Pep
aspartate kinase (EC:2.7.2.4)
Aspartokinase n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JE87_9FIRM rbh
DolZOral124_scaffold_2112_10
Firmicutes bacterium CAG:882, Firmicutes, Bacteria

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comp(9714..10682)
-----------------
DNA (969bp)
protein (323aa)
birA, biotin-[acetyl-CoA-carboxylase] ligase region (EC:6.3.4.15)
Biotin-[acetyl-CoA-carboxylase] ligase n=1 Tax=Firmicutes bacterium CAG:882 RepID=R7BC90_9FIRM
Bifunctional ligase/repressor BirA {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--[acetyl-CoA-carboxylase] ligase {ECO:0000256|HAMAP-Rule:MF_00978}; Biotin--protein ligase {ECO:0000256|HAMAP-Rule:MF_00978
DolZOral124_scaffold_2112_11
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(10675..11535)
-----------------
DNA (861bp)
protein (287aa)
ial:IALB_0221 hypothetical protein id=718163 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFH47933.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteriu
DolZOral124_scaffold_2112_12
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11780..12172)
-----------------
DNA (393bp)
protein (131aa)
Rod binding protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FP02_9CLOT
Rod binding protein {ECO:0000313|EMBL:EMS70203.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112
hypothetical protein
DolZOral124_scaffold_2112_13
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12186..12983)
-----------------
DNA (798bp)
protein (266aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CVQ9_9CLOT
Flagellar basal body rod protein FlgG {ECO:0000313|EMBL:KGG80663.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobac
flgG; flagellar basal-body rod protein FlgG
DolZOral124_scaffold_2112_14
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12996..14060)
-----------------
DNA (1065bp)
protein (355aa)
Flagellar basal-body rod protein FlgG n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AU80_9CLOT
Flagellar basal-body rod protein FlgG {ECO:0000313|EMBL:EOD00723.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibac
flagellar basal body rod protein
DolZOral124_scaffold_2112_15
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14336..15361)
-----------------
DNA (1026bp)
protein (342aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJV0_ALKOO
rod shape-determining protein Mbl
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ABW20082.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphil
DolZOral124_scaffold_2112_16
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15374..16627)
-----------------
DNA (1254bp)
protein (418aa)
murA1; UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA (EC:2.5.1.7)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344}; EC=2.5.1.7 {ECO:0000256|HAMAP-Rule:MF_00111, ECO:0000256|SAAS:SAAS00085344};; Enoylp
UDP-N-acetylglucosamine 1-carboxyvinyltransferase n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0ATW5_CLOA9
DolZOral124_scaffold_2112_17
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17077..18993
-----------------
DNA (1917bp)
protein (639aa)
Copper amine oxidase domain protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CN16_SYNLT
copper amine oxidase domain-containing protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_2112_18
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18990..21092)
-----------------
DNA (2103bp)
protein (701aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTM4_CLOSD
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH22228.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
DolZOral124_scaffold_2112_19
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21124..21852)
-----------------
DNA (729bp)
protein (243aa)
WecB/TagA/CpsF family glycosyl transferase (EC:2.4.1.187)
N-acetylmannosaminyltransferase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CLI1_9CLOT
N-acetylmannosaminyltransferase {ECO:0000313|EMBL:KJF27519.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
DolZOral124_scaffold_2112_20
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21854..22897)
-----------------
DNA (1044bp)
protein (348aa)
Polysaccharide pyruvyl transferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MJ21_ALKOO
polysaccharide pyruvyl transferase
Polysaccharide pyruvyl transferase {ECO:0000313|EMBL:ABW19803.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii
DolZOral124_scaffold_2112_21
GWD2_Clostridiales_32_59_curated, Clostridiales, Bacteria

Not on your lists

comp(22901..23365)
-----------------
DNA (465bp)
protein (155aa)
Putative uncharacterized protein id=2093849 bin=GWD2_Clostridiales_32_59 species=Thermosediminibacter oceani genus=Thermosediminibacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
hypothetical protein Tax=GWD2_Clostridiales_32_59_curated
hypothetical protein
DolZOral124_scaffold_2112_22
Arcobacter nitrofigilis, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23355..24539)
-----------------
DNA (1185bp)
protein (395aa)
alanine racemase (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=572480 species="Bacteria; Proteob
Alanine racemase n=1 Tax=Arcobacter nitrofigilis (strain ATCC 33309 / DSM 7299 / LMG 7604 / NCTC 12251 / CI) RepID=D5V329_ARCNC
DolZOral124_scaffold_2112_23
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25026..25838)
-----------------
DNA (813bp)
protein (271aa)
Copper amine oxidase-like domain-containing protein n=7 Tax=Clostridium thermocellum RepID=A3DC03_CLOTH
copper amine oxidase-like domain-containing protein
Copper amine oxidase-like domain-containing protein {ECO:0000313|EMBL:ABN51482.1}; Flags: Precursor;; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclos
DolZOral124_scaffold_2112_24
Mahella australiensis, Mahella, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25933..27333)
-----------------
DNA (1401bp)
protein (467aa)
Conserved carboxylase region n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F4A2B7_MAHA5
carboxylase-domain containing protein
Conserved carboxylase region {ECO:0000313|EMBL:AEE96164.1}; TaxID=697281 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family IV. Incertae Sedis; Mahella.;"
DolZOral124_scaffold_2112_25
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27378..29357)
-----------------
DNA (1980bp)
protein (660aa)
Transketolase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TX00_ALKMQ
transketolase
Transketolase {ECO:0000313|EMBL:ABR50718.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).;
DolZOral124_scaffold_2112_26
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29380..30273)
-----------------
DNA (894bp)
protein (298aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
Uncharacterized protein n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G5Y8_CLOPA
RluA family pseudouridine synthase
DolZOral124_scaffold_2112_27
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30669..31229)
-----------------
DNA (561bp)
protein (187aa)
Uncharacterized protein n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MF46_ALKOO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABW18715.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain Oh
DolZOral124_scaffold_2112_28
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31513..33423
-----------------
DNA (1911bp)
protein (637aa)
Glutamine synthetase, catalytic region n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TMQ7_ALKMQ
glutamine synthetase
Glutamine synthetase, catalytic region {ECO:0000313|EMBL:ABR47475.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metall
DolZOral124_scaffold_2112_29
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33508..35070)
-----------------
DNA (1563bp)
protein (521aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
Threonine--tRNA ligase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIH2_9FIRM
threonyl-tRNA synthase
Displaying 29 items

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