ggKbase home page

DolZOral124_scaffold_2113

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2113_1
unknown

Not on your lists

comp(313..897)
-----------------
DNA (585bp)
protein (195aa)

This feature has no annotations

DolZOral124_scaffold_2113_2
unknown

Not on your lists

comp(1211..1717)
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

DolZOral124_scaffold_2113_3
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1736..4354)
-----------------
DNA (2619bp)
protein (873aa)
DNA gyrase subunit A {ECO:0000256|HAMAP-Rule:MF_01897}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01897};; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardioba
DNA gyrase subunit A (EC:5.99.1.3)
DNA gyrase subunit A n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N900_9GAMM
DolZOral124_scaffold_2113_4
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4770..5357
-----------------
DNA (588bp)
protein (196aa)
Putative outer membrane protein A n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZJQ3_9GAMM
Putative outer membrane protein A {ECO:0000313|EMBL:EHM49583.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="
OmpA family protein
DolZOral124_scaffold_2113_5
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5534..6793
-----------------
DNA (1260bp)
protein (420aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriace
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N6J1_9GAMM
two-component sensor histidine kinase
DolZOral124_scaffold_2113_6
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6801..7784)
-----------------
DNA (984bp)
protein (328aa)
aminoglycoside phosphotransferase n=1 Tax=Methylomicrobium buryatense RepID=UPI00034BA321
aphA1; aminoglycoside phosphotransferase involved in cell wall biosynthesis
Putative aminoglycoside phosphotransferase involved in cell wall biosynthesis {ECO:0000313|EMBL:CCE25174.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Meth
DolZOral124_scaffold_2113_7
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8056..8415)
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6ITL9_RHOCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACI99320.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillu
DolZOral124_scaffold_2113_8
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8453..10516)
-----------------
DNA (2064bp)
protein (688aa)
Putative carboxy-terminal protease for penicillin-binding protein 3 {ECO:0000313|EMBL:CDH43482.1}; EC=3.4.21.- {ECO:0000313|EMBL:CDH43482.1};; TaxID=1400861 species="Bacteria; Proteobacteria; Gammapro
Periplasmic protease n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AJN2_IGNAJ
periplasmic protease
DolZOral124_scaffold_2113_9
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10645..10920)
-----------------
DNA (276bp)
protein (92aa)
Txe/YoeB family addiction module toxin n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7E1Y2_9BACE
Txe/YoeB family addiction module toxin {ECO:0000313|EMBL:CDD96341.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;"
txe; Addiction module toxin, Txe/YoeB family
DolZOral124_scaffold_2113_10
unknown

Not on your lists

comp(10926..11177)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

DolZOral124_scaffold_2113_11
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11290..12723)
-----------------
DNA (1434bp)
protein (478aa)
GTPase Der n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8NBB4_9GAMM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobac
GTPase Der
DolZOral124_scaffold_2113_12
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12723..13901)
-----------------
DNA (1179bp)
protein (393aa)
outer membrane assembly protein YfgL n=1 Tax=Methylomicrobium buryatense RepID=UPI0003611064
outer membrane assembly lipoprotein YfgL
Outer membrane protein assembly factor BamB {ECO:0000256|HAMAP-Rule:MF_00923}; Flags: Precursor;; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcacea
DolZOral124_scaffold_2113_13
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13898..14539)
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein n=1 Tax=Osedax symbiont Rs1 RepID=S6HLS6_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EPJ46037.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
DolZOral124_scaffold_2113_14
endosymbiont of unidentified scaly snail isolate Monju, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14638..15903)
-----------------
DNA (1266bp)
protein (422aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127, ECO:0000256|SAAS:SAAS00043629};; Histidyl-tRNA synthetase {ECO:00
histidyl-tRNA synthetase (EC:6.1.1.21)
Histidine--tRNA ligase n=1 Tax=endosymbiont of unidentified scaly snail isolate Monju RepID=S6BS82_9GAMM
DolZOral124_scaffold_2113_15
Marinobacter sp. AK21, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15913..16926)
-----------------
DNA (1014bp)
protein (338aa)
Uncharacterized protein n=1 Tax=Vibrio sinaloensis DSM 21326 RepID=E8MCU0_9VIBR
Putative membrane protein {ECO:0000313|EMBL:KEF32575.1}; TaxID=1137280 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter s
DNA-binding protein
DolZOral124_scaffold_2113_16
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16958..17725)
-----------------
DNA (768bp)
protein (256aa)
Type 4 fimbrial biogenesis protein n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EVN2_DICNV
type 4 fimbrial biogenesis protein
Type 4 fimbrial biogenesis protein {ECO:0000313|EMBL:ABQ14357.1}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="D
DolZOral124_scaffold_2113_17
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17974..19065)
-----------------
DNA (1092bp)
protein (364aa)
Dual-specificity RNA methyltransferase RlmN {ECO:0000256|HAMAP-Rule:MF_01849}; EC=2.1.1.192 {ECO:0000256|HAMAP-Rule:MF_01849};; 23S rRNA (adenine(2503)-C(2))-methyltransferase {ECO:0000256|HAMAP-Rule:
Dual-specificity RNA methyltransferase RlmN n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZE67_9GAMM
hypothetical protein
DolZOral124_scaffold_2113_18
Cycloclasticus sp. P1, Cycloclasticus, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19106..19534)
-----------------
DNA (429bp)
protein (143aa)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451, ECO:0000256|RuleBase:RU004013}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.
Nucleoside diphosphate kinase n=3 Tax=Cycloclasticus RepID=K0C4P5_CYCSP
Nucleoside diphosphate kinase
DolZOral124_scaffold_2113_19
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19780..20148
-----------------
DNA (369bp)
protein (123aa)
Ribosomal protein L33 family protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZI57_9GAMM
Ribosomal protein L33 family protein {ECO:0000313|EMBL:EHM52216.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" sourc
hypothetical protein
DolZOral124_scaffold_2113_20
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20173..20754
-----------------
DNA (582bp)
protein (194aa)
Phosphoribosyltransferase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WER8_PSYWF
hypoxanthine-guanine phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ABQ94159.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
DolZOral124_scaffold_2113_21
Thiorhodospira sibirica, Thiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20763..21485
-----------------
DNA (723bp)
protein (241aa)
Purine nucleoside phosphorylase; EC=2.4.2.44 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioinosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID=765914 species="Bacteria; Proteobacteria; G
Purine nucleoside phosphorylase n=1 Tax=Thiorhodospira sibirica ATCC 700588 RepID=G4E2C8_9GAMM
purine phosphorylase family 2
DolZOral124_scaffold_2113_22
Pseudoxanthomonas suwonensis, Pseudoxanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


21620..22048
-----------------
DNA (429bp)
protein (143aa)
50S ribosomal protein L13 n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WQ14_PSEUU
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=743721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Pseu
DolZOral124_scaffold_2113_23
Cardiobacterium hominis, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


22061..22447
-----------------
DNA (387bp)
protein (129aa)
30S ribosomal protein S9 n=1 Tax=Cardiobacterium hominis ATCC 15826 RepID=C8N7I3_9GAMM
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=638300 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; C
rpsI; 30S ribosomal protein S9
DolZOral124_scaffold_2113_24
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22597..22932
-----------------
DNA (336bp)
protein (112aa)
ArsR family transcriptional regulator n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000375B692
Putative transcriptional regulator {ECO:0000313|EMBL:EJL54408.1}; Flags: Precursor;; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobact
Transcriptional regulator, ArsR family
DolZOral124_scaffold_2113_25
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23005..23946
-----------------
DNA (942bp)
protein (314aa)
Phosphofructokinase n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=A5EVG1_DICNV
1-phosphofructokinase
Phosphofructokinase {ECO:0000256|PIRNR:PIRNR000535}; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Dichelobacter.;" source="Dichelobacter
DolZOral124_scaffold_2113_26
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23959..24861
-----------------
DNA (903bp)
protein (301aa)
TIGR01777 family protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8Q169_9GAMM
TIGR01777 family protein {ECO:0000313|EMBL:EEV21674.1}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrobacter.;" source="Enhydrobacter aero
hypothetical protein
DolZOral124_scaffold_2113_27
Pseudoalteromonas atlantica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25039..26031)
-----------------
DNA (993bp)
protein (331aa)
Branched chain amino acid aminotransferase apoenzyme {ECO:0000313|EMBL:ABG41394.1}; EC=2.6.1.42 {ECO:0000313|EMBL:ABG41394.1};; TaxID=342610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alt
Branched chain amino acid aminotransferase apoenzyme n=1 Tax=Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087) RepID=Q15RU4_PSEA6
branched-chain amino acid aminotransferase
DolZOral124_scaffold_2113_28
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26198..26410)
-----------------
DNA (213bp)
protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:EHM55539.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source="Cardiobact
DolZOral124_scaffold_2113_29
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26636..27166)
-----------------
DNA (531bp)
protein (177aa)
Inorganic pyrophosphatase n=1 Tax=Pseudomonas pseudoalcaligenes KF707 RepID=L8MFM5_PSEPS
ppa; inorganic pyrophosphatase
Tax=BJP_IG2102_Gammaproteobacteria_62_140
DolZOral124_scaffold_2113_30
Nitrosococcus halophilus, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27248..28831)
-----------------
DNA (1584bp)
protein (528aa)
glutamate/cysteine ligase (EC:6.3.2.2)
Glutamate--cysteine ligase {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391}; EC=6.3.2.2 {ECO:0000256|HAMAP-Rule:MF_00578, ECO:0000256|RuleBase:RU004391};; Gamma-ECS {ECO:0000256|HAMAP-
glutamate--cysteine ligase n=1 Tax=Methylococcus capsulatus RepID=UPI0003039D57
Displaying items 1-30 of 50 in total

View Taxonomy