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DolZOral124_scaffold_2365

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2365_1

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3..1187
-----------------
DNA (1185bp)
protein (395aa)
Putative transmembrane protein n=1 Tax=uncultured bacterium RepID=Q84CW8_9BACT
Putative transmembrane protein {ECO:0000313|EMBL:AAO91886.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DolZOral124_scaffold_2365_2
unknown

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1198..1791
-----------------
DNA (594bp)
protein (198aa)

This feature has no annotations

DolZOral124_scaffold_2365_3
unknown

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1791..2117
-----------------
DNA (327bp)
protein (109aa)

This feature has no annotations

DolZOral124_scaffold_2365_4
Treponema socranskii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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2277..3059
-----------------
DNA (783bp)
protein (261aa)
D12 class N6 adenine-specific DNA methyltransferase n=1 Tax=Treponema socranskii subsp. socranskii VPI DR56BR1116 = ATCC 35536 RepID=U2MMC9_TRESO
D12 class N6 adenine-specific DNA methyltransferase {ECO:0000313|EMBL:ERF61919.1}; TaxID=1125725 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema socran
D12 class N6 adenine-specific DNA methyltransferase
DolZOral124_scaffold_2365_5
Thermacetogenium phaeum, Thermacetogenium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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3543..3890
-----------------
DNA (348bp)
protein (116aa)
aroH; chorismate mutase AroH (EC:5.4.99.5)
Chorismate mutase AroH {ECO:0000313|EMBL:AFV11780.1}; EC=5.4.99.5 {ECO:0000313|EMBL:AFV11780.1};; TaxID=1089553 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterace
Chorismate mutase AroH n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LIL4_THEPS
DolZOral124_scaffold_2365_6
Herbaspirillum frisingense, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3895..4659
-----------------
DNA (765bp)
protein (255aa)
Methionine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_01974}; Short=MAP {ECO:0000256|HAMAP-Rule:MF_01974};; Short=MetAP {ECO:0000256|HAMAP-Rule:MF_01974};; EC=3.4.11.18 {ECO:0000256|HAMAP-Rule:MF_01974
map; Methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase n=1 Tax=Herbaspirillum frisingense GSF30 RepID=R0EJJ9_9BURK
DolZOral124_scaffold_2365_trna_1
unknown

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4717..4797
-----------------
DNA (81bp)
transferRNA
DolZOral124_scaffold_2365_trna_2
unknown

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4807..4880
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_2365_trna_3
unknown

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4903..4983
-----------------
DNA (81bp)
transferRNA
DolZOral124_scaffold_2365_7
Sphaerochaeta globosa, Sphaerochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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5004..5450
-----------------
DNA (447bp)
protein (149aa)
Uncharacterized protein n=1 Tax=Sphaerochaeta globosa (strain ATCC BAA-1886 / DSM 22777 / Buddy) RepID=F0RVX4_SPHGB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADY13186.1}; TaxID=158189 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Sphaerochaeta.;" source="Sphaerochaeta globosa (strain ATCC BAA-18
DolZOral124_scaffold_2365_8
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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5482..6426
-----------------
DNA (945bp)
protein (315aa)
Beta-lactamase domain protein n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3G7_SPICH
Uncharacterized protein {ECO:0000313|EMBL:KGM43666.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
beta-lactamase domain-containing protein
DolZOral124_scaffold_2365_9
unknown

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6423..6626
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

DolZOral124_scaffold_2365_10
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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6628..7644
-----------------
DNA (1017bp)
protein (339aa)
Uncharacterized protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WJ00_9SPIO
hypothetical protein
Salinispira pacifica strain L21-RPul-D2, complete genome {ECO:0000313|EMBL:AHC15146.1}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinispira.;" source="Salinispi
DolZOral124_scaffold_2365_11
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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7644..9434
-----------------
DNA (1791bp)
protein (597aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=573413 species="Bacteria; Spirochaetes
DNA primase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R315_SPISS rbh
DNA primase
DolZOral124_scaffold_2365_12
Salinispira pacifica, Salinispira, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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9434..11398
-----------------
DNA (1965bp)
protein (655aa)
RNA polymerase sigma factor RpoD n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WH76_9SPIO rbh
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1307761 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Salinisp
DolZOral124_scaffold_2365_13
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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11420..12211
-----------------
DNA (792bp)
protein (264aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R313_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK81199.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae (strain DSM 11293 /
DolZOral124_scaffold_2365_14
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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12573..13487
-----------------
DNA (915bp)
protein (305aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R312_SPISS
hypothetical protein Tax=GWB1_Spirochaetes_48_6_curated
hypothetical protein
DolZOral124_scaffold_2365_15
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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13536..14288
-----------------
DNA (753bp)
protein (251aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R311_SPISS
MreB/Mrl family cell shape determining protein
Cell shape determining protein, MreB/Mrl family {ECO:0000313|EMBL:ADK81197.1}; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragd
DolZOral124_scaffold_2365_16
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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14278..14589
-----------------
DNA (312bp)
protein (104aa)
Cell shape determining protein, MreB/Mrl family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3F9_SPICH
cell shape determining protein, MreB/Mrl family; K03569 rod shape-determining protein MreB and related proteins Tax=GWB1_Spirochaetes_48_6_curated
cell shape determining protein, MreB/Mrl family
DolZOral124_scaffold_2365_17
GWB1_Spirochaetes_48_6_curated, Spirochaetes, Bacteria

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14597..15469
-----------------
DNA (873bp)
protein (291aa)
Cell shape-determining protein MreC n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YHY0_TREPZ
mreC; rod shape-determining protein MreC; K03570 rod shape-determining protein MreC Tax=GWB1_Spirochaetes_48_6_curated
mreC; rod shape-determining protein MreC
DolZOral124_scaffold_2365_18
RBG_13_Spirochaetes_68_11_curated, Spirochaetes, Bacteria

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15459..15962
-----------------
DNA (504bp)
protein (168aa)
Rod shape-determining protein MreD n=1 Tax=Treponema brennaborense (strain DSM 12168 / CIP 105900 / DD5/3) RepID=F4LMN4_TREBD
rod shape-determining protein MreD; K03571 rod shape-determining protein MreD Tax=RBG_13_Spirochaetes_68_11_curated
rod shape-determining protein MreD
DolZOral124_scaffold_2365_19
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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15932..17833
-----------------
DNA (1902bp)
protein (634aa)
penicillin-binding protein 2 (EC:2.4.1.129)
Penicillin-binding protein 2 {ECO:0000313|EMBL:ADK81194.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ADK81194.1};; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" s
penicillin-binding protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037E8ED0
DolZOral124_scaffold_2365_20
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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17823..19151
-----------------
DNA (1329bp)
protein (443aa)
Rod shape-determining protein RodA n=1 Tax=Treponema primitia (strain ATCC BAA-887 / DSM 12427 / ZAS-2) RepID=F5YHX7_TREPZ rbh
mrdB; rod shape-determining protein RodA
Rod shape-determining protein RodA {ECO:0000313|EMBL:AEF86699.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BA
DolZOral124_scaffold_2365_21
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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19151..21661
-----------------
DNA (2511bp)
protein (837aa)
radical SAM protein Tax=RBG_16_Spirochaete_67_19_curated
Radical SAM domain protein id=4706888 bin=GWC2_Spirochaete_52_13 species=Sphaerochaeta globosa genus=Sphaerochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWC2_Spirochaete_52_13 organism_group=Spirochaetes rbh
radical SAM protein
DolZOral124_scaffold_2365_22
Treponema primitia, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(21631..22440)
-----------------
DNA (810bp)
protein (270aa)
MazG family protein id=3215054 bin=GWA1_Treponema_62_8 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWA1_Treponema_62_8 organism_group=Spirochaetes rbh
MazG family protein
MazG family protein {ECO:0000313|EMBL:AEF86385.1}; TaxID=545694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema primitia (strain ATCC BAA-887 / DSM 124
DolZOral124_scaffold_2365_23
unknown

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comp(22487..22765)
-----------------
DNA (279bp)
protein (93aa)

This feature has no annotations

DolZOral124_scaffold_2365_24
unknown

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comp(22798..23580)
-----------------
DNA (783bp)
protein (261aa)

This feature has no annotations

DolZOral124_scaffold_2365_25
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(23561..25840)
-----------------
DNA (2280bp)
protein (760aa)
Adenylate/guanylate cyclase with Chase sensor n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3F2_SPICH
adenylate/guanylate cyclase with Chase sensor Tax=RBG_16_Spirochaete_67_19_curated
adenylate/guanylate cyclase with Chase sensor
DolZOral124_scaffold_2365_26
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(25860..26528)
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein n=1 Tax=Spirochaeta bajacaliforniensis RepID=UPI00037662FA
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ADK81180.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smarag
DolZOral124_scaffold_2365_27
Treponema caldarium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(26560..28086)
-----------------
DNA (1527bp)
protein (509aa)
Transcriptional regulator, NifA subfamily, Fis Family n=1 Tax=Spirochaeta caldaria (strain ATCC 51460 / DSM 7334 / H1) RepID=F8F3F0_SPICH
Fis family NifA subfamily transcriptional regulator
Transcriptional regulator, NifA subfamily, Fis Family {ECO:0000313|EMBL:AEJ19526.1}; TaxID=744872 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema calda
Displaying items 1-30 of 44 in total

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