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DolZOral124_scaffold_2416

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Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2416_trna_1
unknown

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comp(304..377)
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_2416_1
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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923..1930
-----------------
DNA (1008bp)
protein (336aa)
gapA; glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI2_9GAMM rbh
Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain protein {ECO:0000313|EMBL:EEB78634.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source=
DolZOral124_scaffold_2416_2
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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1945..2940
-----------------
DNA (996bp)
protein (332aa)
Glyceraldehyde-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361160}; EC=1.2.1.- {ECO:0000256|RuleBase:RU361160};; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group;
glyceraldehyde-3-phosphate dehydrogenase, type I (EC:1.2.1.12)
Glyceraldehyde-3-phosphate dehydrogenase, type I n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI1_9GAMM rbh
DolZOral124_scaffold_2416_3
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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2956..5589
-----------------
DNA (2634bp)
protein (878aa)
Phosphoenolpyruvate carboxylase {ECO:0000256|HAMAP-Rule:MF_00595, ECO:0000256|SAAS:SAAS00018769}; Short=PEPC {ECO:0000256|HAMAP-Rule:MF_00595};; Short=PEPCase {ECO:0000256|HAMAP-Rule:MF_00595};; EC=4.
ppc; phosphoenolpyruvate carboxylase (EC:4.1.1.31)
Phosphoenolpyruvate carboxylase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RYI0_9GAMM rbh
DolZOral124_scaffold_2416_4
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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5698..7014
-----------------
DNA (1317bp)
protein (439aa)
Serine protease inhibitor n=2 Tax=Congregibacter RepID=A4ABN4_9GAMM
Serine protease inhibitor {ECO:0000313|EMBL:EAQ96547.2}; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Congregibacter.;" source="Congregibacter litoralis
hypothetical protein
DolZOral124_scaffold_2416_5
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7011..7397)
-----------------
DNA (387bp)
protein (129aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7RTW1_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB80524.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2
DolZOral124_scaffold_2416_6
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7518..8381
-----------------
DNA (864bp)
protein (288aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9E3I8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKU84000.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG
peptidase S1 and S6, chymotrypsin/Hap
DolZOral124_scaffold_2416_7
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8416..9039)
-----------------
DNA (624bp)
protein (208aa)
Glutathione S-transferase {ECO:0000313|EMBL:KGE05232.1}; EC=2.5.1.18 {ECO:0000313|EMBL:KGE05232.1};; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudo
Glutathione S-transferase, N-terminal domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2D1_9GAMM
glutathione S-transferase domain-containing protein
DolZOral124_scaffold_2416_8
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9508..11502)
-----------------
DNA (1995bp)
protein (665aa)
ATP-dependent DNA helicase Rep {ECO:0000256|HAMAP-Rule:MF_01920}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_01920, ECO:0000256|SAAS:SAAS00145970};; TaxID=247634 species="Bacteria; Proteobacteria; Gammapr
ATP-dependent DNA helicase Rep (EC:3.6.1.-)
ATP-dependent DNA helicase Rep n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2C9_9GAMM rbh
DolZOral124_scaffold_2416_9
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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11858..13378
-----------------
DNA (1521bp)
protein (507aa)
Carotenoid cleavage dioxygenase 1 n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KL88_9GAMM rbh
Lignostilbene-alpha,beta-dioxygenase {ECO:0000313|EMBL:KGE03612.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DS
carotenoid cleavage dioxygenase
DolZOral124_scaffold_2416_10
gamma proteobacterium NOR5-3, Gammaproteobacteria, Proteobacteria, Bacteria

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13404..14336
-----------------
DNA (933bp)
protein (311aa)
Transcriptional regulator, HxlR family n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KL89_9GAMM rbh
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:EED31856.1}; TaxID=566466 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium NOR5-3.;"
transcriptional regulator
DolZOral124_scaffold_2416_11
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14390..15892)
-----------------
DNA (1503bp)
protein (501aa)
Putative Mg chelatase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2C5_9GAMM rbh
Putative Mg chelatase {ECO:0000313|EMBL:EEB77166.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2148.;"
Mg chelatase subunit ChlI
DolZOral124_scaffold_2416_12
gamma proteobacterium IMCC3088, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15933..16193)
-----------------
DNA (261bp)
protein (87aa)
Putative uncharacterized protein n=1 Tax=gamma proteobacterium IMCC3088 RepID=F3L1S8_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EGG29690.1}; TaxID=876044 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="gamma proteobacterium IMCC3088.;"
hypothetical protein
DolZOral124_scaffold_2416_13
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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16335..16673
-----------------
DNA (339bp)
protein (113aa)
Nitrogen regulatory protein PII n=1 Tax=gamma proteobacterium HIMB55 RepID=H3NST6_9GAMM
Nitrogen regulatory protein P-II {ECO:0000313|EMBL:KGE03688.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 19
nitrogen regulatory protein P-II
DolZOral124_scaffold_2416_14
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16983..17684)
-----------------
DNA (702bp)
protein (234aa)
2-haloalkanoic acid dehalogenase {ECO:0000313|EMBL:KGE03687.1}; EC=3.8.1.2 {ECO:0000313|EMBL:KGE03687.1};; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade;
Haloacid dehalogenase-like hydrolase, putative n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2B9_9GAMM
HAD-superfamily hydrolase
DolZOral124_scaffold_2416_15
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17688..18383)
-----------------
DNA (696bp)
protein (232aa)
Putative uncharacterized protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2B7_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EEB77173.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC2
protein of unknown function DUF484
DolZOral124_scaffold_2416_16
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18418..19269)
-----------------
DNA (852bp)
protein (284aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
dapF2; diaminopimelate epimerase DapF (EC:5.1.1.7)
Diaminopimelate epimerase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2B6_9GAMM rbh
DolZOral124_scaffold_2416_17
Pseudomonas sp. 12M76_air, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19266..20525)
-----------------
DNA (1260bp)
protein (420aa)
Diaminopimelate decarboxylase n=2 Tax=Vibrio fluvialis RepID=S7I091_VIBFL
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
diaminopimelate decarboxylase
DolZOral124_scaffold_2416_18
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20709..22112)
-----------------
DNA (1404bp)
protein (468aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2B1_9GAMM rbh
DolZOral124_scaffold_2416_19
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

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22202..23257
-----------------
DNA (1056bp)
protein (352aa)
Histidine kinase family protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2B0_9GAMM rbh
Histidine kinase family protein {ECO:0000313|EMBL:EEB77188.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC21
sensor histidine kinase FimS
DolZOral124_scaffold_2416_20
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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23261..23998
-----------------
DNA (738bp)
protein (246aa)
Alginate biosynthesis regulator n=1 Tax=Marinobacter nanhaiticus D15-8W RepID=N6WT79_9ALTE
Autolysis response regulater LytR {ECO:0000313|EMBL:KGE04017.1}; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Pseudohaliea.;" source="Haliea rubra DSM 1
positive alginate biosynthesis regulatory protein
DolZOral124_scaffold_2416_21
Hyphomonas sp. T16B2, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24054..24380)
-----------------
DNA (327bp)
protein (109aa)
Transcriptional regulator, ArsR family n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0C1Q8_HYPNA
Uncharacterized protein {ECO:0000313|EMBL:KCZ52026.1}; TaxID=1280941 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. T16B
ArsR family transcriptional regulator
DolZOral124_scaffold_2416_22
Hyphomonas sp. BRH_c22, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(24373..27612)
-----------------
DNA (3240bp)
protein (1080aa)
multidrug transporter AcrB n=1 Tax=Ponticaulis koreensis RepID=UPI0003B3E6DE rbh
Multidrug transporter AcrB {ECO:0000313|EMBL:KJS39494.1}; TaxID=1629710 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. B
RND efflux transporter
DolZOral124_scaffold_2416_23
Hyphomonas sp. CY54-11-8, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(27609..28592)
-----------------
DNA (984bp)
protein (328aa)
transporter n=1 Tax=Ponticaulis koreensis RepID=UPI0003B4864B rbh
Uncharacterized protein {ECO:0000313|EMBL:KCZ46049.1}; TaxID=1280944 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas sp. CY54
RND family efflux transporter MFP subunit
DolZOral124_scaffold_2416_24
Hyphomonas jannaschiana, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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28741..30012
-----------------
DNA (1272bp)
protein (424aa)
Sulfide-quinone oxidoreductase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=Q0BZH1_HYPNA rbh
Sulfide-quinone oxidoreductase {ECO:0000313|EMBL:KCZ90504.1}; TaxID=1280952 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas j
sqr; sulfide-quinone oxidoreductase
DolZOral124_scaffold_2416_25
Hyphomonadaceae bacterium BRH_c29, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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30474..30677
-----------------
DNA (204bp)
protein (68aa)
sulfurtransferase n=1 Tax=Methyloferula stellata RepID=UPI0003800316
Sulfurtransferase {ECO:0000313|EMBL:KJS25446.1}; TaxID=1629720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae.;" source="Hyphomonadaceae bacterium BRH_c29.;"
hypothetical protein
DolZOral124_scaffold_2416_26
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30787..31719
-----------------
DNA (933bp)
protein (311aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2A8_9GAMM rbh
hemC; porphobilinogen deaminase
DolZOral124_scaffold_2416_27
Pseudohaliea rubra, Pseudohaliea, Gammaproteobacteria, Proteobacteria, Bacteria

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31706..32482
-----------------
DNA (777bp)
protein (259aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:KGE04019.1}; EC=4.2.1.75 {ECO:0000313|EMBL:KGE04019.1};; TaxID=1265313 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade; Ps
uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9F8_9GAMM
DolZOral124_scaffold_2416_28
Congregibacter litoralis, Congregibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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32479..33885
-----------------
DNA (1407bp)
protein (469aa)
Putative enzyme of heme biosynthesis {ECO:0000313|EMBL:EAQ97126.1}; EC=2.1.1.107 {ECO:0000313|EMBL:EAQ97126.1};; TaxID=314285 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 cl
Putative enzyme of heme biosynthesis n=1 Tax=Congregibacter litoralis KT71 RepID=A4A9F9_9GAMM
hemX; heme biosynthesis protein
DolZOral124_scaffold_2416_29
marine gamma proteobacterium HTCC2148, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33889..35139
-----------------
DNA (1251bp)
protein (417aa)
HemY N-terminal domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 RepID=B7S2A5_9GAMM rbh
HemY N-terminal domain protein {ECO:0000313|EMBL:EEB77150.1}; TaxID=247634 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; OM60 clade.;" source="marine gamma proteobacterium HTCC214
HemY domain-containing protein
Displaying items 1-30 of 40 in total

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