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DolZOral124_scaffold_2435

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2435_1
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..492
-----------------
DNA (492bp)
protein (164aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K2V7_CLOPA
Protein of unknown function (DUF1703)/Predicted AAA-ATPase
Uncharacterized protein {ECO:0000313|EMBL:AGK96928.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
DolZOral124_scaffold_2435_2
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(603..2363)
-----------------
DNA (1761bp)
protein (587aa)
exonuclease recj (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:GAF01895.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Sac
Single-stranded-DNA-specific exonuclease RecJ id=3458475 bin=GWA2_Bacteroidetes_33_15 species=unknown genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_33_15 organism_group=Bacteroidetes
DolZOral124_scaffold_2435_3
unknown

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comp(2675..3148)
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

DolZOral124_scaffold_2435_4
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

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3435..6467
-----------------
DNA (3033bp)
protein (1011aa)
Glycoside hydrolase, family 3 id=2693121 bin=GWF2_Bacteroidetes_33_38 species=uncultured Cytophagia bacterium genus=unknown taxon_order=unknown taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
beta-glucosidase-like glycosyl hydrolase Tax=GWF2_Bacteroidetes_33_38_curated
glycoside hydrolase
DolZOral124_scaffold_2435_trna_1
unknown

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comp(6676..6750)
-----------------
DNA (75bp)
transferRNA
DolZOral124_scaffold_2435_5
CG_Bacteroid_02, Bacteroidetes, Bacteria

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comp(6949..9315)
-----------------
DNA (2367bp)
protein (789aa)
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=CG_Bacteroid_02
TonB-dependent receptor id=3715705 bin=GWF2_Bacteroidetes_49_14 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab) rbh
TonB-dependent receptor
DolZOral124_scaffold_2435_6
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9760..10779)
-----------------
DNA (1020bp)
protein (340aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|SAAS:SAAS00128522};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
Ferrochelatase id=4088264 bin=GWF2_Bacteroidetes_41_9 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hemH; ferrochelatase
DolZOral124_scaffold_2435_7
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10910..12286)
-----------------
DNA (1377bp)
protein (459aa)
protoporphyrinogen oxidase (EC:1.3.3.4); K00231 oxygen-dependent protoporphyrinogen oxidase [EC:1.3.3.4] Tax=GWA2_Bacteroidetes_40_15_curated
protoporphyrinogen oxidase (EC:1.3.3.4)
protoporphyrinogen oxidase id=4186838 bin=GWC2_Bacteroidetes_40_22 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
DolZOral124_scaffold_2435_8
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(12379..12855)
-----------------
DNA (477bp)
protein (159aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
Putative uncharacterized protein id=4480093 bin=GWF2_Bacteroidetes_43_63 species=Prevotella oulorum genus=Prevotella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hypothetical protein
DolZOral124_scaffold_2435_9
unknown

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13075..13311
-----------------
DNA (237bp)
protein (79aa)

This feature has no annotations

DolZOral124_scaffold_2435_10
Desulfovibrio salexigens, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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13425..15614
-----------------
DNA (2190bp)
protein (730aa)
Ferrous iron transport protein B n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BS89_DESAD
ferrous iron transport protein B
Ferrous iron transport protein B {ECO:0000313|EMBL:ACS79565.1}; TaxID=526222 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="D
DolZOral124_scaffold_2435_11
Flexistipes sinusarabici, Flexistipes, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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comp(15788..17101)
-----------------
DNA (1314bp)
protein (438aa)
citrate (Si)-synthase (EC:2.3.3.1)
Citrate (Si)-synthase {ECO:0000313|EMBL:AEI15199.1}; EC=2.3.3.1 {ECO:0000313|EMBL:AEI15199.1};; TaxID=717231 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Flexistipes.;" s
Citrate (Si)-synthase n=1 Tax=Flexistipes sinusarabici (strain DSM 4947 / MAS 10) RepID=F8E8S6_FLESM rbh
DolZOral124_scaffold_2435_12
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(17315..17692)
-----------------
DNA (378bp)
protein (126aa)
endoribonuclease L-PSP n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A1403
Endoribonuclease L-PSP {ECO:0000313|EMBL:KJF43931.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. J
endoribonuclease L-PSP
DolZOral124_scaffold_2435_13
Prevotella sp. CAG:255, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17771..18760
-----------------
DNA (990bp)
protein (330aa)
shikimate 5-dehydrogenase n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237BAB7
Shikimate dehydrogenase {ECO:0000313|EMBL:CCX69756.1}; TaxID=1262923 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotel
shikimate dehydrogenase
DolZOral124_scaffold_2435_14
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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18880..20295
-----------------
DNA (1416bp)
protein (472aa)
signal peptidase I; K03100 signal peptidase I [EC:3.4.21.89] Tax=GWE2_Bacteroidetes_32_14_curated
Signal peptidase I id=1787051 bin=GWE2_Bacteroidetes_32_14 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good + rbh
signal peptidase I
DolZOral124_scaffold_2435_15
Porphyromonadaceae bacterium ING2-E5B, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20321..20995
-----------------
DNA (675bp)
protein (225aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1562970 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; uncla
signal peptidase I
DolZOral124_scaffold_2435_16
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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21121..23430
-----------------
DNA (2310bp)
protein (770aa)
PAS id=1804783 bin=GWE2_Bacteroidetes_32_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
histidine kinase hamp region domain protein Tax=GWE2_Bacteroidetes_32_14_curated
PAS domain-containing protein
DolZOral124_scaffold_2435_17
Amphimedon queenslandica, Amphimedon, Haplosclerida, Demospongiae, Porifera, Metazoa

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23509..24243
-----------------
DNA (735bp)
protein (245aa)
PREDICTED: trichohyalin-like, partial n=1 Tax=Xiphophorus maculatus RepID=UPI0003B4CE90
Uncharacterized protein {ECO:0000313|EnsemblMetazoa:PAC:15704392}; TaxID=400682 species="Eukaryota; Metazoa; Porifera; Demospongiae; Haplosclerida; Niphatidae; Amphimedon.;" source="Amphimedon queensl
DolZOral124_scaffold_2435_18
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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24423..24776
-----------------
DNA (354bp)
protein (118aa)
Uncharacterized protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JX09_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ELR73310.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
hypothetical protein
DolZOral124_scaffold_2435_19
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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24969..26948
-----------------
DNA (1980bp)
protein (660aa)
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KM35_SOLCM
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
Phosphoglycerol transferase family protein, alkaline phosphatase superfamily {ECO:0000313|EMBL:AFD08957.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingo
DolZOral124_scaffold_2435_20
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(27095..28060)
-----------------
DNA (966bp)
protein (322aa)
Predicted Fe-S oxidoreductase {ECO:0000313|EMBL:GAO28669.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum JCM
TIGR01212 family radical SAM protein id=2059130 bin=GWD2_Bacteroidetes_33_33 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
DolZOral124_scaffold_2435_21
GWF2_Bacteroidetes_35_48_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(28047..29585)
-----------------
DNA (1539bp)
protein (513aa)
alkyl hydroperoxide reductase n=1 Tax=Anaerophaga thermohalophila RepID=UPI0002D964CB
thiol-disulfide isomerase Tax=GWF2_Bacteroidetes_35_48_curated
thiol-disulfide isomerase
DolZOral124_scaffold_2435_22
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(29970..31508)
-----------------
DNA (1539bp)
protein (513aa)
membrane protein involved in aromatic hydrocarbon degradation id=4455877 bin=GWF2_Bacteroidetes_49_14 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
Outer membrane protein transport protein (OMPP1/FadL/TodX) Tax=GWF2_Bacteroidetes_49_14_curated
aromatic hydrocarbon degradation membrane protein
DolZOral124_scaffold_2435_23
unknown

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comp(31639..31992)
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

DolZOral124_scaffold_2435_24
unknown

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32067..32603
-----------------
DNA (537bp)
protein (179aa)

This feature has no annotations

DolZOral124_scaffold_2435_25
unknown

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comp(32476..32766)
-----------------
DNA (291bp)
protein (97aa)

This feature has no annotations

DolZOral124_scaffold_2435_26
unknown

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33489..33611
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

DolZOral124_scaffold_2435_27
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(33632..34030)
-----------------
DNA (399bp)
protein (133aa)
DNA-binding protein n=1 Tax=Anaerophaga thermohalophila RepID=UPI00031F38C6
PUR-alpha/beta/gamma DNA/RNA-binding protein Tax=GWB2_Bacteroidetes_41_8_curated
PUR-alpha/beta/gamma DNA/RNA-binding protein
DolZOral124_scaffold_2435_28
unknown

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34163..34372
-----------------
DNA (210bp)
protein (70aa)

This feature has no annotations

Displaying 29 items

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