ggKbase home page

DolZOral124_scaffold_2524

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2524_1
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(163..6321)
-----------------
DNA (6159bp)
protein (2053aa)
Uncharacterized protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NIJ4_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN82658.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
Por secretion system C-terminal sorting domain protein
DolZOral124_scaffold_2524_2
Gramella forsetii, Gramella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

6668..7279
-----------------
DNA (612bp)
protein (204aa)
Membrane protein containing DUF1211 n=1 Tax=Gramella forsetii (strain KT0803) RepID=A0M0H2_GRAFK
hypothetical protein
Membrane protein containing DUF1211 {ECO:0000313|EMBL:CAL66117.1}; TaxID=411154 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Gramella.;" source="Gramella fors
DolZOral124_scaffold_2524_3
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7430..7840
-----------------
DNA (411bp)
protein (137aa)
ferredoxin n=1 Tax=Porphyromonas gulae RepID=UPI00035DBEB8
Ferredoxin {ECO:0000313|EMBL:KGN81971.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
hypothetical protein
DolZOral124_scaffold_2524_4
unknown

Not on your lists

8114..8281
-----------------
DNA (168bp)
protein (56aa)

This feature has no annotations

DolZOral124_scaffold_2524_5
unknown

Not on your lists

8297..9529
-----------------
DNA (1233bp)
protein (411aa)

This feature has no annotations

DolZOral124_scaffold_2524_6
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9598..10416)
-----------------
DNA (819bp)
protein (273aa)
Exonuclease n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IDM6_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84457.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
DolZOral124_scaffold_2524_7
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10416..11060)
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00037FEBDD
Uncharacterized protein {ECO:0000313|EMBL:KGN84419.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_2524_8
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(11236..13218)
-----------------
DNA (1983bp)
protein (661aa)
Arylsulfatase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GZT7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84865.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
DolZOral124_scaffold_2524_9
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13233..16115)
-----------------
DNA (2883bp)
protein (961aa)
DNA-directed RNA polymerase, omega subunit n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K603_9PORP
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:ERJ70308.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porph
DNA translocase FtsK
DolZOral124_scaffold_2524_10
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

16689..17528
-----------------
DNA (840bp)
protein (280aa)
Phosphoesterase n=1 Tax=Elizabethkingia meningoseptica 502 RepID=T0NFY2_ELIME
Phosphoesterase {ECO:0000313|EMBL:KFF21109.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;
undecaprenyl pyrophosphate phosphatase
DolZOral124_scaffold_2524_11
Capnocytophaga canimorsus, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17498..19042
-----------------
DNA (1545bp)
protein (515aa)
Polymyxin resistance protein pmrC {ECO:0000313|EMBL:CEN46117.1}; EC=2.7.-.- {ECO:0000313|EMBL:CEN46117.1};; TaxID=28188 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteri
polymyxin resistance protein pmrC (EC:2.7.-.-)
Polymyxin resistance protein pmrC n=1 Tax=Capnocytophaga canimorsus (strain 5) RepID=F9YS10_CAPCC
DolZOral124_scaffold_2524_12
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19198..21054
-----------------
DNA (1857bp)
protein (619aa)
Methylmalonyl-CoA mutase, small subunit n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K5Q2_9PORP
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KGN85166.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-2
methylmalonyl-CoA mutase small subunit
DolZOral124_scaffold_2524_13
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21064..23217
-----------------
DNA (2154bp)
protein (718aa)
mutB; methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2JZ64_9PORP
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ERJ70194.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral
DolZOral124_scaffold_2524_14
Algibacter lectus, Algibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

23323..24663
-----------------
DNA (1341bp)
protein (447aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4B041_KROS4
Uncharacterized protein {ECO:0000313|EMBL:GAL63604.1}; TaxID=221126 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Algibacter.;" source="Algibacter lectus.;"
hypothetical protein
DolZOral124_scaffold_2524_15
Porphyromonas macacae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25044..26375)
-----------------
DNA (1332bp)
protein (444aa)
IgA Peptidase M64 n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NBC4_9PORP
Peptidase M64 {ECO:0000313|EMBL:KGN74334.1}; TaxID=28115 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas macacae.;"
hypothetical protein
DolZOral124_scaffold_2524_16
Prevotella copri, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26380..27192)
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Prevotella copri DSM 18205 RepID=D1PB70_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFB36027.1}; TaxID=537011 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella copri DSM 18205.;"
hypothetical protein
DolZOral124_scaffold_2524_17
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27365..28360)
-----------------
DNA (996bp)
protein (332aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; P
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IP18_9PORP rbh
ribosome-associated GTPase
DolZOral124_scaffold_2524_18
Porphyromonas sp. oral taxon 279, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(28364..28927)
-----------------
DNA (564bp)
protein (188aa)
Ribosome-recycling factor n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GTJ8_9PORP
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=1125723 species="Bacteria;
frr; ribosome recycling factor
DolZOral124_scaffold_2524_19
unknown

Not on your lists

comp(29060..32491)
-----------------
DNA (3432bp)
protein (1144aa)

This feature has no annotations

DolZOral124_scaffold_2524_20
unknown

Not on your lists

comp(32513..32692)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

DolZOral124_scaffold_2524_21
unknown

Not on your lists

comp(32753..32890)
-----------------
DNA (138bp)
protein (46aa)

This feature has no annotations

DolZOral124_scaffold_2524_22
Odoribacter laneus CAG:561, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33075..33449
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein n=1 Tax=Odoribacter laneus CAG:561 RepID=R5UUV1_9PORP
Uncharacterized protein {ECO:0000313|EMBL:CCZ82073.1}; TaxID=1263089 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" source="Odo
thioesterase
DolZOral124_scaffold_2524_23
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33451..33654)
-----------------
DNA (204bp)
protein (68aa)
hypothetical protein n=1 Tax=Porphyromonas gulae RepID=UPI00035C9E27
Uncharacterized protein {ECO:0000313|EMBL:KGN83643.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_2524_24
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(33671..34126)
-----------------
DNA (456bp)
protein (152aa)
N-acetylmuramoyl-L-alanine amidase family protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IWF7_9PORP
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:KGN83644.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas
N-acetylmuramoyl-L-alanine amidase
DolZOral124_scaffold_2524_25
unknown

Not on your lists

comp(34228..34734)
-----------------
DNA (507bp)
protein (169aa)

This feature has no annotations

DolZOral124_scaffold_2524_26
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34750..35241)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00037F5862
histone-like family DNA-binding protein
Putative DNA-binding protein {ECO:0000313|EMBL:EOA09937.1}; TaxID=1195243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas gingi
DolZOral124_scaffold_2524_27
unknown

Not on your lists

35929..36312
-----------------
DNA (384bp)
protein (128aa)

This feature has no annotations

DolZOral124_scaffold_2524_28
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36327..36995
-----------------
DNA (669bp)
protein (223aa)
ABC transporter n=1 Tax=Porphyromonas macacae RepID=UPI000371C5ED
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGN81866.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromona
ABC transporter ATP-binding protein
DolZOral124_scaffold_2524_29
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37009..38292
-----------------
DNA (1284bp)
protein (428aa)
hypothetical protein n=1 Tax=Porphyromonas macacae RepID=UPI00036D30B1
Uncharacterized protein {ECO:0000313|EMBL:KGN81865.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
ABC transporter permease
Displaying 29 items

View Taxonomy