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DolZOral124_scaffold_2720

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2720_1
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(180..785)
-----------------
DNA (606bp)
protein (202aa)
Translation initiation factor IF-3 n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K8D2_9PORP
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyrom
infC; translation initiation factor IF-3
DolZOral124_scaffold_2720_2
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(844..2817)
-----------------
DNA (1974bp)
protein (658aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
threonyl-tRNA synthetase n=1 Tax=Porphyromonas gulae RepID=UPI00037754BB
thrS; threonyl-tRNA synthetase
DolZOral124_scaffold_2720_3
Treponema medium, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(3366..4001)
-----------------
DNA (636bp)
protein (212aa)
Uncharacterized protein n=1 Tax=Treponema medium ATCC 700293 RepID=S3KVR0_TREMD
Uncharacterized protein {ECO:0000313|EMBL:EPF28569.1}; TaxID=1125700 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema medium ATCC 700293.;"
hypothetical protein
DolZOral124_scaffold_2720_4
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4259..5257)
-----------------
DNA (999bp)
protein (333aa)
PF04041 domain protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5VV28_9PORP
Glycosidase {ECO:0000313|EMBL:KGN86189.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
hypothetical protein
DolZOral124_scaffold_2720_5
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5276..6577)
-----------------
DNA (1302bp)
protein (434aa)
Transporter, major facilitator family protein n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K3Z4_9PORP
Transporter, major facilitator family protein {ECO:0000313|EMBL:ERJ69558.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Po
signal transducer
DolZOral124_scaffold_2720_6
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6580..7464)
-----------------
DNA (885bp)
protein (295aa)
Bifunctional protein FolD n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J5TNA9_9PORP
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase
DolZOral124_scaffold_2720_7
Porphyromonas sp. KLE 1280, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7571..8923)
-----------------
DNA (1353bp)
protein (451aa)
Signal recognition particle protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GTY8_9PORP rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=997829 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
ffh; signal recognition particle protein
DolZOral124_scaffold_2720_8
Tannerella forsythia, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8970..9323)
-----------------
DNA (354bp)
protein (118aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
Aspartate 1-decarboxylase n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UK14_TANFA
panD; aspartate 1-decarboxylase
DolZOral124_scaffold_2720_9
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(9906..12710)
-----------------
DNA (2805bp)
protein (935aa)
DNA-directed DNA polymerase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NII4_9PORP
DNA polymerase I {ECO:0000313|EMBL:KGN86233.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860
DNA polymerase I
DolZOral124_scaffold_2720_10
unknown

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comp(13146..13358)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

DolZOral124_scaffold_2720_11
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13568..14254
-----------------
DNA (687bp)
protein (229aa)
Anaphase-promoting complex, cyclosome, subunit 3 n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6H2Z2_9PORP
Anaphase-promoting protein {ECO:0000313|EMBL:KGN86471.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT
hypothetical protein
DolZOral124_scaffold_2720_12
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14279..14791
-----------------
DNA (513bp)
protein (171aa)
ribH; putative 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VRV7_9PORP
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00
DolZOral124_scaffold_2720_trna_1
unknown

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14824..14906
-----------------
DNA (83bp)
transferRNA
DolZOral124_scaffold_2720_trna_2
unknown

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14919..14987
-----------------
DNA (69bp)
transferRNA
DolZOral124_scaffold_2720_13
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15040..16374
-----------------
DNA (1335bp)
protein (445aa)
Peptidase family M49 n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NG04_9PORP
Peptidase M49 {ECO:0000313|EMBL:KGN86247.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
dihydrofolate reductase
DolZOral124_scaffold_2720_14
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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16347..17633
-----------------
DNA (1287bp)
protein (429aa)
Peptidase family M49 domain protein n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J4VPK0_9PORP
Peptidase M49 {ECO:0000313|EMBL:KGN86247.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860.;"
M49 family peptidase
DolZOral124_scaffold_2720_15
unknown

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17923..18111
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

DolZOral124_scaffold_2720_16
unknown

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18131..20059
-----------------
DNA (1929bp)
protein (643aa)

This feature has no annotations

DolZOral124_scaffold_2720_17
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20266..20754
-----------------
DNA (489bp)
protein (163aa)
UPI0003D1B5AD related cluster n=1 Tax=unknown RepID=UPI0003D1B5AD
DNA-binding protein histone-like family
Histidinol phosphate phosphatase {ECO:0000313|EMBL:ETA26902.1}; TaxID=1211023 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas g
DolZOral124_scaffold_2720_18
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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20942..21817
-----------------
DNA (876bp)
protein (292aa)
Dihydropteroate synthase n=2 Tax=Porphyromonas gingivalis RepID=U2LC27_PORGN
Dihydropteroate synthase {ECO:0000313|EMBL:KGN84356.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-2
folP; dihydropteroate synthase
DolZOral124_scaffold_2720_19
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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21826..22590
-----------------
DNA (765bp)
protein (255aa)
TIGR00159 family protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NC17_9PORP
Membrane protein {ECO:0000313|EMBL:KGN84357.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290 OH860
hypothetical protein
DolZOral124_scaffold_2720_20
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22619..23602
-----------------
DNA (984bp)
protein (328aa)
Polyprenyl synthetase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K5Y5_9PORP
Polyprenyl synthetase {ECO:0000313|EMBL:KGN83618.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-290
polyprenyl synthetase
DolZOral124_scaffold_2720_21
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23615..23818
-----------------
DNA (204bp)
protein (68aa)
Uncharacterized protein {ECO:0000313|EMBL:KGN83619.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
DolZOral124_scaffold_2720_22
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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23821..25338
-----------------
DNA (1518bp)
protein (506aa)
LysM domain protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NDU9_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN85842.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_2720_23
Porphyromonas catoniae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25357..26049
-----------------
DNA (693bp)
protein (231aa)
Uncharacterized protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NDF8_9PORP
Outer membrane protein beta-barrel domain protein {ECO:0000313|EMBL:EWC92412.1}; TaxID=887901 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source=
hypothetical protein
DolZOral124_scaffold_2720_24
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26168..27148)
-----------------
DNA (981bp)
protein (327aa)
SPFH/Band 7/PHB domain protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NJ47_9PORP
SPFH/Band 7/PHB domain protein {ECO:0000313|EMBL:KGN83610.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
band 7/Mec-2 family protein
DolZOral124_scaffold_2720_25
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(27173..27619)
-----------------
DNA (447bp)
protein (149aa)
Nodulation efficiency protein NfeD n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GVR8_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN71317.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-23
hypothetical protein
DolZOral124_scaffold_2720_26
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27692..28552)
-----------------
DNA (861bp)
protein (287aa)
Acyltransferase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NCG2_9PORP
Glycerol acyltransferase {ECO:0000313|EMBL:KGN71510.1}; TaxID=1515613 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-2
hypothetical protein
DolZOral124_scaffold_2720_27
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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29675..30682
-----------------
DNA (1008bp)
protein (336aa)
K+-dependent Na+/Ca+ exchanger family protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NAV0_9PORP
Sodium:proton exchanger {ECO:0000313|EMBL:KGN81941.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
K+-dependent Na+/Ca+ exchanger related-protein
DolZOral124_scaffold_2720_28
Parabacteroides sp. CAG:409, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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30701..32950
-----------------
DNA (2250bp)
protein (750aa)
Guanosine-3' 5'-bis(Diphosphate) 3'-pyrophosphohydrolase n=1 Tax=Parabacteroides sp. CAG:409 RepID=R7JNX1_9PORP
Guanosine-3' 5'-bis(Diphosphate) 3'-pyrophosphohydrolase {ECO:0000313|EMBL:CDE65341.1}; TaxID=1262913 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides;
guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
Displaying items 1-30 of 40 in total

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