ggKbase home page

DolZOral124_scaffold_2758

Search features with annotation key words

Displaying items 1-30 of 50 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2758_1
unknown

Not on your lists

comp(2..64)
-----------------
DNA (63bp)
protein (21aa)

This feature has no annotations

DolZOral124_scaffold_2758_2
BJP_IG2069_Synergistales_47_25, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

comp(104..2419)
-----------------
DNA (2316bp)
protein (772aa)
type I restriction-modification system restriction subunit HsdR (EC:3.1.21.3)
Type I restriction-modification system, R subunit id=1973837 bin=GWD2_Clostridiales_32_59 species=Enterococcus faecium genus=Enterococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWD2_Clostridiales_32_59 organism_group=Firmicute organism_desc=a65
Tax=BJP_IG2069_Synergistales_47_25
DolZOral124_scaffold_2758_3
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2570..3241)
-----------------
DNA (672bp)
protein (224aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Actinobacillus minor 202 RepID=C8KX13_9PAST
DolZOral124_scaffold_2758_4
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3238..4335)
-----------------
DNA (1098bp)
protein (366aa)
Periplasmic serine peptidase DegS {ECO:0000313|EMBL:EQA10853.1}; EC=3.4.21.- {ECO:0000313|EMBL:EQA10853.1};; TaxID=1275971 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Paste
peptidase n=1 Tax=Pasteurella pneumotropica RepID=UPI00037D983F
peptidase
DolZOral124_scaffold_2758_5
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4336..4629)
-----------------
DNA (294bp)
protein (98aa)
Trp operon repressor homolog n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R5A8_PASTR
Trp operon repressor
Trp operon repressor homolog {ECO:0000256|HAMAP-Rule:MF_00475}; TaxID=1263832 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Bibersteinia.;" source="Biberstei
DolZOral124_scaffold_2758_6
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4651..5250)
-----------------
DNA (600bp)
protein (200aa)
Outer-membrane lipoprotein carrier protein n=1 Tax=Actinobacillus minor 202 RepID=C8KXJ0_9PAST
Outer-membrane lipoprotein carrier protein {ECO:0000256|HAMAP-Rule:MF_00240, ECO:0000256|SAAS:SAAS00028972}; Flags: Precursor;; TaxID=591023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pas
Outer-membrane lipoprotein carrier protein
DolZOral124_scaffold_2758_7
Actinobacillus ureae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5253..6275)
-----------------
DNA (1023bp)
protein (341aa)
ABC transporter, ATP-binding protein n=1 Tax=Actinobacillus ureae ATCC 25976 RepID=E8KH37_9PAST
Peptide transport system ATP-binding protein SapD
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFX91801.1}; TaxID=887324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Acti
DolZOral124_scaffold_2758_8
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6263..7159)
-----------------
DNA (897bp)
protein (299aa)
Peptide transport system permease protein sapC n=1 Tax=Haemophilus parasuis str. Nagasaki RepID=U4RLR2_HAEPR
Peptide transport system permease {ECO:0000313|EMBL:EYE72223.1}; TaxID=1117322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophil
peptide transport system permease
DolZOral124_scaffold_2758_9
Actinobacillus ureae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7152..8102)
-----------------
DNA (951bp)
protein (317aa)
Peptide transport system permease protein SapB n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R9H4_PASTR
Peptide transport system permease protein SapB
ABC transporter, permease protein {ECO:0000313|EMBL:EFX91799.1}; TaxID=887324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinob
DolZOral124_scaffold_2758_10
Actinobacillus succinogenes, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8102..9046)
-----------------
DNA (945bp)
protein (315aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) RepID=A6VMX9_ACTSZ rbh
sigma-54 factor interaction domain-containing protein
Sigma-54 factor interaction domain-containing protein {ECO:0000313|EMBL:ABR74326.1}; TaxID=339671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillu
DolZOral124_scaffold_2758_11
[Haemophilus] parasuis, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9055..9369)
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=3 Tax=Haemophilus parasuis RepID=U4SA86_HAEPR
hypothetical protein
UPF0265 protein HPS10_06240 {ECO:0000256|HAMAP-Rule:MF_00683}; TaxID=1450514 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Haemophilus
DolZOral124_scaffold_2758_12
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9412..10479)
-----------------
DNA (1068bp)
protein (356aa)
Permease PerM n=7 Tax=Actinobacillus pleuropneumoniae RepID=E0F3R9_ACTPL
perM; permease perM-like protein
Permease PerM {ECO:0000313|EMBL:EFM96739.1}; TaxID=754259 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus pleuropneumo
DolZOral124_scaffold_2758_13
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10605..10820)
-----------------
DNA (216bp)
protein (72aa)
L-lactate dehydrogenase n=1 Tax=Actinobacillus minor 202 RepID=C8L008_9PAST
Membrane protein {ECO:0000313|EMBL:EXI62092.1}; TaxID=1450449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia haemolytica sero
L-lactate dehydrogenase
DolZOral124_scaffold_2758_14
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10946..11293)
-----------------
DNA (348bp)
protein (116aa)
Purine nucleoside phosphoramidase n=4 Tax=Pasteurella haemolytica RepID=S5F631_PASHA
purine nucleoside phosphoramidase
Purine nucleoside phosphoramidase {ECO:0000313|EMBL:EPZ00612.1}; TaxID=1329905 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Mannheimia
DolZOral124_scaffold_2758_15
[Mannheimia] succiniciproducens, Basfia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11302..12027)
-----------------
DNA (726bp)
protein (242aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_01589};; TaxID=221988 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales;
tRNA (cmo5U34)-methyltransferase n=1 Tax=Actinobacillus succinogenes (strain ATCC 55618 / 130Z) RepID=CMOA_ACTSZ
putative methyltransferase
DolZOral124_scaffold_2758_16
Actinobacillus pleuropneumoniae, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12038..12583)
-----------------
DNA (546bp)
protein (182aa)
GPR1/FUN34/yaaH family protein n=1 Tax=Actinobacillus pleuropneumoniae serovar 10 str. D13039 RepID=E0F7G2_ACTPL
GPR1/FUN34/yaaH family protein {ECO:0000313|EMBL:EFM95411.1}; TaxID=754259 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobaci
hypothetical protein
DolZOral124_scaffold_2758_17
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12603..13739)
-----------------
DNA (1137bp)
protein (379aa)
Putrescine-binding periplasmic protein n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W3D6_HAEP3
polyamine transporter subunit
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=862965 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Hae
DolZOral124_scaffold_2758_18
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13809..16391)
-----------------
DNA (2583bp)
protein (861aa)
pepN; Aminopeptidase N (EC:3.4.11.2)
Aminopeptidase N n=1 Tax=Actinobacillus minor 202 RepID=C8KXN6_9PAST
Aminopeptidase N {ECO:0000313|EMBL:EEV24565.1}; TaxID=591023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus minor 202
DolZOral124_scaffold_2758_19
Streptococcus parasanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16540..18282)
-----------------
DNA (1743bp)
protein (581aa)
Uncharacterized protein n=1 Tax=Streptococcus parasanguinis CC87K RepID=V8B9I7_STRPA
Uncharacterized protein {ECO:0000313|EMBL:ETD11844.1}; TaxID=1073372 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus parasanguinis CC8
ABC transporter ATP-binding protein
DolZOral124_scaffold_2758_20
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18643..19512
-----------------
DNA (870bp)
protein (290aa)
Phosphatidylserine decarboxylase proenzyme {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00154492}; EC=4.1.1.65 {ECO:0000256|HAMAP-Rule:MF_00662, ECO:0000256|SAAS:SAAS00093350};; TaxID=145044
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R847_PASTR
Phosphatidylserine decarboxylase proenzyme
DolZOral124_scaffold_2758_21
Gallibacterium anatis, Gallibacterium, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19614..21683
-----------------
DNA (2070bp)
protein (690aa)
Glycine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039777}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00255, ECO:0000256|SAAS:SAAS00039811};; Glycyl-tRNA synthetas
glycyl-tRNA synthetase n=1 Tax=Gallibacterium anatis RepID=UPI000370BB18 rbh
glycyl-tRNA synthetase subunit beta
DolZOral124_scaffold_2758_22
Mannheimia haemolytica, Mannheimia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21699..22892
-----------------
DNA (1194bp)
protein (398aa)
hypothetical protein n=1 Tax=Avibacterium paragallinarum RepID=UPI00034AB998
2-octaprenyl-6-methoxyphenyl hydroxylase {ECO:0000313|EMBL:EXI61584.1}; TaxID=1450449 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Mannheimia.;" source="Man
UbiH protein
DolZOral124_scaffold_2758_23
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22893..23471
-----------------
DNA (579bp)
protein (193aa)
Electron transport complex protein rnfA n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R4B9_PASTR
Electron transport complex protein rnfA
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1171377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Bibersteinia.;" source="B
DolZOral124_scaffold_2758_24
Haemophilus parainfluenzae, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23471..24022
-----------------
DNA (552bp)
protein (184aa)
Electron transport complex protein RnfB n=1 Tax=Haemophilus parainfluenzae (strain T3T1) RepID=E1W5Q3_HAEP3
iron-sulfur protein
Electron transport complex subunit B {ECO:0000256|HAMAP-Rule:MF_00463}; TaxID=888828 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Hae
DolZOral124_scaffold_2758_25
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24025..25911
-----------------
DNA (1887bp)
protein (629aa)
Electron transport complex protein rnfC n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R853_PASTR
Electron transport complex protein rnfC
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1171377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Bibersteinia.;" source="B
DolZOral124_scaffold_2758_26
unknown

Not on your lists

25998..26153
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

DolZOral124_scaffold_2758_27
Aggregatibacter actinomycetemcomitans, Aggregatibacter, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26146..27213
-----------------
DNA (1068bp)
protein (356aa)
Electron transport complex protein RnfD n=1 Tax=Aggregatibacter actinomycetemcomitans RhAA1 RepID=H0KCJ7_AGGAC
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1089447 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Aggregatibacter.;" source
rnfD; electron transport complex protein RnfD
DolZOral124_scaffold_2758_28
Haemophilus sputorum, Haemophilus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27215..27847
-----------------
DNA (633bp)
protein (211aa)
Electron transport complex, RnfABCDGE type, G subunit n=1 Tax=Haemophilus sputorum HK 2154 RepID=J4KDD0_9PAST
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1078483 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus.;" source="Ha
electron transport complex protein RnfG
DolZOral124_scaffold_2758_29
Bibersteinia trehalosi, Bibersteinia, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27848..28522
-----------------
DNA (675bp)
protein (225aa)
Electron transport complex protein rnfE n=1 Tax=Bibersteinia trehalosi USDA-ARS-USMARC-192 RepID=M4R858_PASTR
Electron transport complex protein rnfE
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1263832 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Bibersteinia.;" source="B
DolZOral124_scaffold_2758_30
Actinobacillus minor, Actinobacillus, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28527..29387)
-----------------
DNA (861bp)
protein (287aa)
Phosphoserine phosphatase n=1 Tax=Actinobacillus minor 202 RepID=C8L064_9PAST
Phosphoserine phosphatase {ECO:0000313|EMBL:EEV25443.1}; TaxID=591023 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Actinobacillus.;" source="Actinobacillus
SerB protein
Displaying items 1-30 of 50 in total

View Taxonomy