ggKbase home page

DolZOral124_scaffold_1117

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1117_1
Enterococcus faecium, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(327..812)
-----------------
DNA (486bp)
protein (162aa)
Uncharacterized protein n=1 Tax=Enterococcus faecium 10/96A RepID=U7TUY7_ENTFC
Uncharacterized protein {ECO:0000313|EMBL:ERT48163.1}; TaxID=1391465 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecium 10/96A.;"
GNAT family acetyltransferase
DolZOral124_scaffold_1117_2
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(824..2155)
-----------------
DNA (1332bp)
protein (444aa)
NADH oxidase {ECO:0000313|EMBL:EFI41432.1}; EC=1.6.99.3 {ECO:0000313|EMBL:EFI41432.1};; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source
NADH oxidase n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N7L3_9FIRM
NADH oxidase
DolZOral124_scaffold_1117_3
unknown

Not on your lists

2351..2815
-----------------
DNA (465bp)
protein (155aa)

This feature has no annotations

DolZOral124_scaffold_1117_4
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2835..3350)
-----------------
DNA (516bp)
protein (172aa)
No significant homology n=1 Tax=Caloramator australicus RC3 RepID=G0V4S4_9CLOT
No significant homology {ECO:0000313|EMBL:CCC58114.1}; TaxID=857293 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloramator.;" source="Caloramator australicus RC3.;"
hypothetical protein
DolZOral124_scaffold_1117_5
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3453..4178
-----------------
DNA (726bp)
protein (242aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNM2_ALKMQ
4Fe-4S ferredoxin {ECO:0000313|EMBL:KGG79877.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214
4Fe-4S ferredoxin
DolZOral124_scaffold_1117_6
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4166..4684
-----------------
DNA (519bp)
protein (173aa)
NUDIX domain protein n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4VEL9_CLOBI
NUDIX domain protein {ECO:0000313|EMBL:EQK39575.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermentan
NUDIX hydrolase
DolZOral124_scaffold_1117_7
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4678..5919)
-----------------
DNA (1242bp)
protein (414aa)
Cl- channel voltage-gated family protein id=4341549 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
Cl-channel voltage-gated family protein; K03281 chloride channel protein, CIC family Tax=GWE2_Bacteroidetes_32_14_curated
voltage gated chloride channel family protein
DolZOral124_scaffold_1117_8
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6158..7534
-----------------
DNA (1377bp)
protein (459aa)
Putative uncharacterized protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q0G9_CLONN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABK62087.1}; TaxID=386415 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi (strain NT).;"
DolZOral124_scaffold_1117_9
unknown

Not on your lists

7592..9076
-----------------
DNA (1485bp)
protein (495aa)

This feature has no annotations

DolZOral124_scaffold_1117_10
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9076..10701
-----------------
DNA (1626bp)
protein (542aa)
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Eubacterium sp. CAG:603 RepID=R5NMB9_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1117_11
unknown

Not on your lists

10786..12594
-----------------
DNA (1809bp)
protein (603aa)

This feature has no annotations

DolZOral124_scaffold_1117_12
Halobacteroides halobius, Halobacteroides, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12594..14486
-----------------
DNA (1893bp)
protein (631aa)
DNA helicase, putative n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K7I9_HALHC
DNA helicase, putative
DNA helicase, putative {ECO:0000313|EMBL:AGB40299.1}; TaxID=748449 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Halobacteroides.;" source="Halobacteroides halobius (
DolZOral124_scaffold_1117_13
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14470..15063
-----------------
DNA (594bp)
protein (198aa)
trpGD3; Anthranilate synthase component II (EC:4.1.3.27)
Anthranilate synthase component II {ECO:0000313|EMBL:CDM68460.1}; EC=4.1.3.27 {ECO:0000313|EMBL:CDM68460.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
anthranilate synthase subunit II n=1 Tax=Clostridium sp. JC122 RepID=UPI000288F737
DolZOral124_scaffold_1117_14
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15035..16393
-----------------
DNA (1359bp)
protein (453aa)
Aminodeoxychorismate synthase, component I {ECO:0000313|EMBL:KIE48076.1}; EC=2.6.1.85 {ECO:0000313|EMBL:KIE48076.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
Aminodeoxychorismate synthase, component I n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CQ86_CLOPF rbh
pabB; para-aminobenzoate synthase, component I
DolZOral124_scaffold_1117_15
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16386..17099
-----------------
DNA (714bp)
protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium colicanis 209318 RepID=N9Y591_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ03364.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
aminotransferase class IV family protein
DolZOral124_scaffold_1117_16
Clostridium sp. NCR, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17185..18756)
-----------------
DNA (1572bp)
protein (524aa)
Peptide chain release factor 3 n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VFK3_CLOBI
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=1538552 species="Bacteria; Firmicutes; Clostridia;
prfC; peptide chain release factor 3
DolZOral124_scaffold_1117_17
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19137..19571
-----------------
DNA (435bp)
protein (145aa)
MarR family protein n=2 Tax=Clostridium sordellii RepID=T0CWA3_CLOSO
MarR family transcriptional regulator {ECO:0000313|EMBL:CEP98202.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium
transcriptional regulator, MarR family
DolZOral124_scaffold_1117_18
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19575..20120)
-----------------
DNA (546bp)
protein (182aa)
Regulatory protein RecX n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N0Q0_FINMA
recX; regulatory protein RecX
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium ac
DolZOral124_scaffold_1117_19
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

20179..20964
-----------------
DNA (786bp)
protein (262aa)
Uncharacterized protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2E7P1_9BACT
UPF0246 protein HLPCO_002787 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Haloplasma contractile SSD-17B.;"
hypothetical protein
DolZOral124_scaffold_1117_20
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21124..21660
-----------------
DNA (537bp)
protein (179aa)
NADH dehydrogenase (Ubiquinone), 24 kDa subunit n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J9N9_DESRM
NADH dehydrogenase (ubiquinone), 24 kDa subunit
NADH dehydrogenase (Ubiquinone), 24 kDa subunit {ECO:0000313|EMBL:ABO51792.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulf
DolZOral124_scaffold_1117_21
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21662..22039
-----------------
DNA (378bp)
protein (126aa)
NADP oxidoreductase n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI000368C2DE
NADP-reducing hydrogenase, subunit B
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1117_22
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22041..23831
-----------------
DNA (1791bp)
protein (597aa)
nuoF2; NADH-quinone oxidoreductase subunit F 2 (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit F 2 {ECO:0000313|EMBL:AHM56142.1}; EC=1.6.99.5 {ECO:0000313|EMBL:AHM56142.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriacea
4Fe-4S binding domain protein n=1 Tax=Clostridium sporogenes ATCC 15579 RepID=J7T5K0_CLOSG
DolZOral124_scaffold_1117_23
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23840..25582
-----------------
DNA (1743bp)
protein (581aa)
iron hydrogenase 1 (EC:1.12.7.2)
Iron hydrogenase 1 {ECO:0000313|EMBL:AHM56143.1}; EC=1.12.7.2 {ECO:0000313|EMBL:AHM56143.1};; TaxID=1286171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" sou
Putative ferredoxin hydrogenase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2D6Q6_9FIRM rbh
DolZOral124_scaffold_1117_24
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25645..26670
-----------------
DNA (1026bp)
protein (342aa)
Branched-chain-amino-acid aminotransferase {ECO:0000256|RuleBase:RU004517}; EC=2.6.1.42 {ECO:0000256|RuleBase:RU004517};; TaxID=1403537 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr
ilvE; Branched-chain-amino-acid aminotransferase (BCAT) (EC:2.6.1.42)
Branched-chain-amino-acid aminotransferase n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU40_CLOSD
DolZOral124_scaffold_1117_25
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26802..27047
-----------------
DNA (246bp)
protein (82aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CAG:132 RepID=R6KQN5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEO12464.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum (st
DolZOral124_scaffold_1117_26
unknown

Not on your lists

27136..27669
-----------------
DNA (534bp)
protein (178aa)

This feature has no annotations

DolZOral124_scaffold_1117_27
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27696..28184)
-----------------
DNA (489bp)
protein (163aa)
NUDIX hydrolase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SPM1_CLOC7
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ADL50070.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain ATCC 3529
DolZOral124_scaffold_1117_28
unknown

Not on your lists

28251..29249
-----------------
DNA (999bp)
protein (333aa)

This feature has no annotations

DolZOral124_scaffold_1117_29
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29331..29789
-----------------
DNA (459bp)
protein (153aa)
Ribosome maturation factor RimP n=1 Tax=Bacillus nealsonii AAU1 RepID=R9CBK4_9BACI
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
hypothetical protein
DolZOral124_scaffold_1117_30
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29800..30954
-----------------
DNA (1155bp)
protein (385aa)
Transcription termination protein NusA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CEA1_9CLOT
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" s
transcription termination factor NusA
Displaying items 1-30 of 43 in total

View Taxonomy