ggKbase home page

DolZOral124_scaffold_1156

Search features with annotation key words

Displaying items 31-57 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1156_31
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23966..24502)
-----------------
DNA (537bp)
protein (179aa)
50S ribosomal protein L5 n=6 Tax=Moraxella catarrhalis RepID=D5V8E1_MORCR rbh
rplE; 50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=749219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrha
DolZOral124_scaffold_1156_32
Moraxella macacae, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24521..24841)
-----------------
DNA (321bp)
protein (107aa)
50S ribosomal protein L24 n=1 Tax=Moraxella boevrei RepID=UPI000371ACA9
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1230338 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella macaca
rplX; 50S ribosomal protein L24
DolZOral124_scaffold_1156_33
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(24850..25218)
-----------------
DNA (369bp)
protein (123aa)
50S ribosomal protein L14 n=2 Tax=Psychrobacter RepID=RL14_PSYWF
rplN; 50S ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxel
DolZOral124_scaffold_1156_34
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25337..25603)
-----------------
DNA (267bp)
protein (89aa)
30S ribosomal protein S17 n=11 Tax=Moraxella catarrhalis RepID=D5V8E4_MORCR
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxel
rpsQ; 30S ribosomal protein S17
DolZOral124_scaffold_1156_35
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25600..25797)
-----------------
DNA (198bp)
protein (66aa)
LSU ribosomal protein L29p (L35e) n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T8H2_9GAMM
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
50S ribosomal protein L29
DolZOral124_scaffold_1156_36
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25797..26210)
-----------------
DNA (414bp)
protein (138aa)
50S ribosomal protein L16 n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=RL16_PSYWF
rplP; 50S ribosomal protein L16
50S ribosomal protein L16 {ECO:0000255|HAMAP-Rule:MF_01342}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolZOral124_scaffold_1156_37
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26216..26938)
-----------------
DNA (723bp)
protein (241aa)
30S ribosomal protein S3 n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SP98_9GAMM rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
rpsC; 30S ribosomal protein S3
DolZOral124_scaffold_1156_38
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(26941..27270)
-----------------
DNA (330bp)
protein (110aa)
50S ribosomal protein L22 n=11 Tax=Moraxella catarrhalis RepID=D5V8E8_MORCR
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychr
rplV; 50S ribosomal protein L22
DolZOral124_scaffold_1156_39
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27280..27552)
-----------------
DNA (273bp)
protein (91aa)
30S ribosomal protein S19 n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288737B
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
rpsS; 30S ribosomal protein S19
DolZOral124_scaffold_1156_40
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(27564..28391)
-----------------
DNA (828bp)
protein (276aa)
50S ribosomal protein L2 n=10 Tax=Moraxella catarrhalis RepID=D5V8F0_MORCR rbh
rplB; 50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=749219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrha
DolZOral124_scaffold_1156_41
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28403..28726)
-----------------
DNA (324bp)
protein (108aa)
50S ribosomal protein L23 n=1 Tax=Psychrobacter lutiphocae RepID=UPI00035F1AB2
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000255|HAMAP-Rule:MF_01369}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolZOral124_scaffold_1156_42
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28723..29325)
-----------------
DNA (603bp)
protein (201aa)
50S ribosomal protein L4 n=1 Tax=Psychrobacter lutiphocae RepID=UPI00037E4005 rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
rplD; 50S ribosomal protein L4
DolZOral124_scaffold_1156_43
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29340..29978)
-----------------
DNA (639bp)
protein (213aa)
50S ribosomal protein L3 n=11 Tax=Moraxella catarrhalis RepID=D5V8F3_MORCR
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxell
rplC; 50S ribosomal protein L3
DolZOral124_scaffold_1156_44
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30029..30340)
-----------------
DNA (312bp)
protein (104aa)
30S ribosomal protein S10 n=4 Tax=Psychrobacter RepID=RS10_PSYA2
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
DolZOral124_scaffold_1156_45
unknown

Not on your lists

comp(30700..30987)
-----------------
DNA (288bp)
protein (96aa)

This feature has no annotations

DolZOral124_scaffold_1156_46
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31406..33301)
-----------------
DNA (1896bp)
protein (632aa)
Ribonuclease G {ECO:0000313|EMBL:EGK14432.1}; EC=3.1.26.- {ECO:0000313|EMBL:EGK14432.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrob
Ribonuclease G n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SPA6_9GAMM rbh
ribonuclease
DolZOral124_scaffold_1156_47
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33473..34099)
-----------------
DNA (627bp)
protein (209aa)
Maf-like protein maf n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SPA7_9GAMM
Maf-like protein maf {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
maf protein
DolZOral124_scaffold_1156_48
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34121..34597)
-----------------
DNA (477bp)
protein (159aa)
rod shape-determining protein MreD n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288E538
Rod shape-determining protein MreD {ECO:0000313|EMBL:ERL56423.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychro
rod shape-determining protein MreD
DolZOral124_scaffold_1156_49
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34750..35604)
-----------------
DNA (855bp)
protein (285aa)
Cell shape-determining protein MreC n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QDJ1_PSYCK
rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseud
DolZOral124_scaffold_1156_50
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35662..36696)
-----------------
DNA (1035bp)
protein (345aa)
rod shape-determining protein Mbl n=1 Tax=Psychrobacter lutiphocae RepID=UPI00036DCE9B rbh
Rod shape-determining protein MreB {ECO:0000313|EMBL:EGK14436.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychro
rod shape-determining protein MreB
DolZOral124_scaffold_1156_51
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36929..37237
-----------------
DNA (309bp)
protein (103aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003734684
glutamyl-tRNA(Gln) amidotransferase subunit C
DolZOral124_scaffold_1156_52
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37323..38816
-----------------
DNA (1494bp)
protein (498aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=259536
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=GATA_PSYA2 rbh
DolZOral124_scaffold_1156_53
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

38875..39462
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037CC325
HupE-UreJ family metal transporter {ECO:0000313|EMBL:EGG93179.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
nickel uptake porter, HupE
DolZOral124_scaffold_1156_54
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39903..41378
-----------------
DNA (1476bp)
protein (492aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00222465}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WCI1_PSYWF rbh
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B
DolZOral124_scaffold_1156_55
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

41622..42602
-----------------
DNA (981bp)
protein (327aa)
Uncharacterized protein n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PZS4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:EEV22359.1}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrobacter.;" source="Enhydrobacter aeros
DolZOral124_scaffold_1156_56
unknown

Not on your lists

42655..42777
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

DolZOral124_scaffold_1156_trna_1
unknown

Not on your lists

42716..42778
-----------------
DNA (63bp)
transferRNA
Displaying items 31-57 of 57 in total

View Taxonomy