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DolZOral124_scaffold_1156

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1156_1
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..1860)
-----------------
DNA (1860bp)
protein (620aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
Isoleucine--tRNA ligase n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4TA60_9GAMM
isoleucyl-tRNA synthetase
DolZOral124_scaffold_1156_2
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2156..2551)
-----------------
DNA (396bp)
protein (132aa)
Sel1 repeat protein n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZYR4_ORNRL
hypothetical protein
Sel1 repeat protein {ECO:0000313|EMBL:AFL96848.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source="Ornithobacterium rhin
DolZOral124_scaffold_1156_3
Kingella oralis, Kingella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2585..3046)
-----------------
DNA (462bp)
protein (154aa)
Sel1 repeat protein n=1 Tax=Kingella oralis ATCC 51147 RepID=C4GK61_9NEIS
Sel1 repeat protein {ECO:0000313|EMBL:EEP68183.1}; TaxID=629741 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Kingella.;" source="Kingella oralis ATCC 51147.;"
Sel1 repeat protein
DolZOral124_scaffold_1156_4
Acinetobacter sp. NIPH 2036, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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3415..4563
-----------------
DNA (1149bp)
protein (383aa)
tRNA/tmRNA (uracil-C(5))-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01011, ECO:0000256|SAAS:SAAS00211003}; EC=2.1.1.35 {ECO:0000256|HAMAP-Rule:MF_01011};; tRNA (uracil(54)-C(5))-methyltransferase {E
trmA; tRNA (uracil-5-)-methyltransferase (EC:2.1.1.35)
tRNA/tmRNA (uracil-C(5))-methyltransferase n=1 Tax=Acinetobacter sp. NIPH 758 RepID=N8UYH8_9GAMM
DolZOral124_scaffold_1156_5
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4584..5177
-----------------
DNA (594bp)
protein (198aa)
MarC family membrane protein n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SN55_9GAMM
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter s
multiple antibiotic resistance (MarC)-like protein
DolZOral124_scaffold_1156_6
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5152..6171
-----------------
DNA (1020bp)
protein (340aa)
rocF; Arginase (EC:3.5.3.1)
Arginase {ECO:0000256|RuleBase:RU361159}; EC=3.5.3.1 {ECO:0000256|RuleBase:RU361159};; TaxID=480 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" so
Arginase n=3 Tax=Moraxella catarrhalis RepID=F1W6C4_MORCA
DolZOral124_scaffold_1156_7
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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6214..7446
-----------------
DNA (1233bp)
protein (411aa)
rocD2; Ornithine aminotransferase 2 (EC:2.6.1.13)
Ornithine aminotransferase 2 {ECO:0000313|EMBL:AIT42483.1}; EC=2.6.1.13 {ECO:0000313|EMBL:AIT42483.1};; Ornithine--oxo-acid transaminase {ECO:0000313|EMBL:AIK01445.1}; EC=2.6.1.13 {ECO:0000313|EMBL:AI
Ornithine-oxo-acid transaminase n=1 Tax=Moraxella catarrhalis 46P47B1 RepID=F1WKB0_MORCA
DolZOral124_scaffold_1156_8
Psychrobacter sp. JCM 18901, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7588..8079)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI00035CBAC1
Thioredoxin {ECO:0000313|EMBL:GAF56350.1}; TaxID=1298609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. JCM 18901.;"
thioredoxin
DolZOral124_scaffold_1156_9
Thiomicrospira crunogena, Thiomicrospira, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8124..8408)
-----------------
DNA (285bp)
protein (95aa)
Putative uncharacterized protein n=1 Tax=Thiomicrospira crunogena (strain XCL-2) RepID=Q31G91_THICR
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABB41832.1}; TaxID=317025 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Thiomicrospira.;" source="Thiomicrospira
DolZOral124_scaffold_1156_10
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8625..10586)
-----------------
DNA (1962bp)
protein (654aa)
heat shock protein 90 n=1 Tax=Psychrobacter lutiphocae RepID=UPI000371AF0D rbh
Chaperone protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; Heat shock protein HtpG {ECO:0000256|HAMAP-Rule:MF_00505}; High temperature protein G {ECO:0000256|HAMAP-Rule:MF_00505}; TaxID=349106 species=
heat shock protein 90
DolZOral124_scaffold_1156_11
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10798..11754)
-----------------
DNA (957bp)
protein (319aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000255|HAMAP-Rule:MF_00191}; EC=1.17.1.2 {ECO:0000255|HAMAP-Rule:MF_00191};; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteri
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=ISPH_PSYWF rbh
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
DolZOral124_scaffold_1156_12
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11934..12671)
-----------------
DNA (738bp)
protein (246aa)
fabG; 3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FUC4_PSYA2
3-oxoacyl-[acyl-carrier protein] reductase {ECO:0000313|EMBL:GAF62120.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source=
DolZOral124_scaffold_1156_13
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12668..13639)
-----------------
DNA (972bp)
protein (324aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudo
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QDF5_PSYCK rbh
malonyl CoA-acyl carrier protein transacylase
DolZOral124_scaffold_1156_14
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(13900..14082)
-----------------
DNA (183bp)
protein (61aa)
50S ribosomal protein L32 n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SP73_9GAMM
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
DolZOral124_scaffold_1156_15
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14290..14826)
-----------------
DNA (537bp)
protein (179aa)
Uncharacterized protein n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T508_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:ERL56457.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter aqua
hypothetical protein
DolZOral124_scaffold_1156_16
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15009..15680
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WCL7_PSYWF
hypothetical protein
Putative transporting ATPase {ECO:0000313|EMBL:ERL56456.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolZOral124_scaffold_1156_17
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15704..16324
-----------------
DNA (621bp)
protein (207aa)
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003632FDF
YciO family {ECO:0000313|EMBL:ERL56455.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter aquaticus CMS 56
translation factor SUA5
DolZOral124_scaffold_1156_18
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(16440..16799)
-----------------
DNA (360bp)
protein (120aa)
50S ribosomal protein L17 n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289096F
rplQ; ribosomal protein L17
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=857577 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxel
DolZOral124_scaffold_1156_19
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16817..17824)
-----------------
DNA (1008bp)
protein (336aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=3 Tax=Psychrobacter RepID=RPOA_PSYA2 rbh
DolZOral124_scaffold_1156_20
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(17852..18493)
-----------------
DNA (642bp)
protein (214aa)
30S ribosomal protein S4 n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=RS4_PSYWF
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella bovoculi
rpsD; 30S ribosomal protein S4
DolZOral124_scaffold_1156_21
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18514..18906)
-----------------
DNA (393bp)
protein (131aa)
30S ribosomal protein S11 n=11 Tax=Moraxella catarrhalis RepID=D5V8D1_MORCR
rpsK; 30S ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=480 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrhali
DolZOral124_scaffold_1156_22
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(18932..19309)
-----------------
DNA (378bp)
protein (126aa)
30S ribosomal protein S13 n=11 Tax=Moraxella catarrhalis RepID=D5V8D2_MORCR
rpsM; 30S ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=480 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella catarrhali
DolZOral124_scaffold_1156_23
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(19654..21036)
-----------------
DNA (1383bp)
protein (461aa)
preprotein translocase subunit SecY n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288846D
secY; preprotein translocase subunit SecY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychr
DolZOral124_scaffold_1156_24
Moraxella catarrhalis, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(20990..21445)
-----------------
DNA (456bp)
protein (152aa)
50S ribosomal protein L15 n=2 Tax=Moraxella catarrhalis RepID=F1W625_MORCA
rplO; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=480 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.
DolZOral124_scaffold_1156_25
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(21445..21615)
-----------------
DNA (171bp)
protein (57aa)
50S ribosomal protein L30 n=1 Tax=Psychrobacter lutiphocae RepID=UPI000378D953
rpmD; 50S ribosomal protein L30
50S ribosomal protein L30 {ECO:0000255|HAMAP-Rule:MF_01371}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolZOral124_scaffold_1156_26
Enhydrobacter aerosaccus, Enhydrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(21644..22141)
-----------------
DNA (498bp)
protein (166aa)
30S ribosomal protein S5 n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PW38_9GAMM
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=553217 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Enhydrob
rpsE; ribosomal protein S5
DolZOral124_scaffold_1156_27
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22144..22494)
-----------------
DNA (351bp)
protein (117aa)
50S ribosomal protein L18 n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000288D634
rplR; 50S ribosomal protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
DolZOral124_scaffold_1156_28
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(22510..23043)
-----------------
DNA (534bp)
protein (178aa)
50S ribosomal protein L6 n=2 Tax=Psychrobacter RepID=RL6_PSYCK rbh
50S ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrob
DolZOral124_scaffold_1156_29
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23238..23636)
-----------------
DNA (399bp)
protein (133aa)
30S ribosomal protein S8 n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=RS8_PSYWF
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000255|HAMAP-Rule:MF_01302}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolZOral124_scaffold_1156_30
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(23649..23954)
-----------------
DNA (306bp)
protein (102aa)
30S ribosomal protein S14 n=1 Tax=Psychrobacter lutiphocae RepID=UPI000362AFF7
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=743974 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Moraxella.;" source="Moraxella bovocul
rpsN; 30S ribosomal protein S14
Displaying items 1-30 of 57 in total

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