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DolZOral124_scaffold_1209

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1209_1
unknown

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1..816
-----------------
DNA (816bp)
protein (272aa)

This feature has no annotations

DolZOral124_scaffold_1209_2
unknown

Not on your lists

1069..2289
-----------------
DNA (1221bp)
protein (407aa)

This feature has no annotations

DolZOral124_scaffold_1209_3
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2286..4244
-----------------
DNA (1959bp)
protein (653aa)
Internalin A-like protein/ S-layer protein n=1 Tax=Clostridium tetani 12124569 RepID=U6ET16_CLOTA
Internalin-A {ECO:0000313|EMBL:KDR95868.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale DSM 5388.;
internalin A-like protein/S-layer protein
DolZOral124_scaffold_1209_4
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4387..5247
-----------------
DNA (861bp)
protein (287aa)
Uncharacterized protein {ECO:0000313|EMBL:KJB94106.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
DolZOral124_scaffold_1209_5
Mycobacterium sp. N0065, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5493..5948)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterized protein n=1 Tax=Mycobacterium canettii CIPT 140070008 RepID=L0Q396_9MYCO
PE_PGRS41 {ECO:0000313|EMBL:AGI94080.1}; TaxID=1316299 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacteriu
wag; Conserved exported protein of unknown function, probable WAG22-like antigen
DolZOral124_scaffold_1209_6
Mycobacterium marinum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(5990..6445)
-----------------
DNA (456bp)
protein (152aa)
PE-PGRS family protein n=1 Tax=Mycobacterium marinum (strain ATCC BAA-535 / M) RepID=B2HT85_MYCMM
PE-PGRS family protein
PE-PGRS family protein {ECO:0000313|EMBL:ACC42806.1}; TaxID=216594 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium marinum (strain ATCC B
DolZOral124_scaffold_1209_7
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6626..7294)
-----------------
DNA (669bp)
protein (223aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
DolZOral124_scaffold_1209_8
Mycobacterium kansasii, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(7295..7726)
-----------------
DNA (432bp)
protein (144aa)
Uncharacterized protein n=1 Tax=Mycobacterium kansasii ATCC 12478 RepID=U5WW74_MYCKA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGZ53394.1}; TaxID=557599 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium kansasii ATCC 12478.;
DolZOral124_scaffold_1209_9
unknown

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comp(7744..8745)
-----------------
DNA (1002bp)
protein (334aa)

This feature has no annotations

DolZOral124_scaffold_1209_10
unknown

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comp(8774..10444)
-----------------
DNA (1671bp)
protein (557aa)

This feature has no annotations

DolZOral124_scaffold_1209_11
unknown

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comp(10434..12644)
-----------------
DNA (2211bp)
protein (737aa)

This feature has no annotations

DolZOral124_scaffold_1209_12
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12634..13866)
-----------------
DNA (1233bp)
protein (411aa)
Sigma-54 factor interaction domain-containing protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXQ0_NITHN
Uncharacterized protein {ECO:0000313|EMBL:KJB94116.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
sigma-54 factor interaction domain-containing protein
DolZOral124_scaffold_1209_13
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13870..17355)
-----------------
DNA (3486bp)
protein (1162aa)
peptidase C39 n=1 Tax=Massilia niastensis RepID=UPI0003671B32
Peptidase C39 {ECO:0000313|EMBL:KIF81411.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;
fusion of ABC transporter-type transmembrane and ATP binding protein
DolZOral124_scaffold_1209_14
Skermanella aerolata, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(17370..18722)
-----------------
DNA (1353bp)
protein (451aa)
Membrane-fusion protein n=1 Tax=Francisella cf. novicida (strain 3523) RepID=F4BFU3_FRACN
Uncharacterized protein {ECO:0000313|EMBL:KJB91710.1}; TaxID=1385368 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella aer
hypothetical protein
DolZOral124_scaffold_1209_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18703..19452)
-----------------
DNA (750bp)
protein (250aa)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichacea
PpiC-type peptidyl-prolyl cis-trans isomerase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BV46_9GAMM
putative peptidyl-prolyl isomerase
DolZOral124_scaffold_1209_16
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(19801..21069)
-----------------
DNA (1269bp)
protein (423aa)
parvulin-like peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidylprolyl isomerase {ECO:0000256|SAAS:SAAS00143148}; EC=5.2.1.8 {ECO:0000256|SAAS:SAAS00143148};; TaxID=1042878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderi
Parvulin-like peptidyl-prolyl isomerase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=G0ERU1_CUPNN
DolZOral124_scaffold_1209_trna_4
unknown

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comp(21781..21853)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1209_17
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(21944..22744)
-----------------
DNA (801bp)
protein (267aa)
Metallophosphoesterase id=3863236 bin=GWF2_WWE1_40_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_WWE1_40_14 organism_group=WWE1
metallophosphoesterase Tax=GWF2_WWE1X_40_14_curated
metallophosphoesterase
DolZOral124_scaffold_1209_18
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(22759..24327)
-----------------
DNA (1569bp)
protein (523aa)
Ribonuclease Y id=3863238 bin=GWF2_WWE1_40_14 species=unknown genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
2',3'-cyclic-nucleotide 2'-phosphodiesterase Tax=GWF2_WWE1X_40_14_curated
2',3'-cyclic-nucleotide 2'-phosphodiesterase
DolZOral124_scaffold_1209_19
RBG_16_Zixibacteria_40_9_curated, Zixibacteria, Bacteria

Not on your lists

comp(24734..25039)
-----------------
DNA (306bp)
protein (102aa)
Uncharacterized protein n=1 Tax=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) RepID=B8EI93_METSB
hypothetical protein; K09888 cell division protein ZapA Tax=RBG_16_Zixibacteria_40_9_curated
hypothetical protein
DolZOral124_scaffold_1209_20
unknown

Not on your lists

comp(25042..25365)
-----------------
DNA (324bp)
protein (108aa)

This feature has no annotations

DolZOral124_scaffold_1209_21
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists


comp(25407..27803)
-----------------
DNA (2397bp)
protein (799aa)
Phenylalanine--tRNA ligase beta subunit id=3863244 bin=GWF2_WWE1_40_14 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
Phenylalanyl-tRNA synthetase subunit beta Tax=GWF2_WWE1X_40_14_curated
pheT; phenylalanyl-tRNA synthetase subunit beta
DolZOral124_scaffold_1209_22
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists


comp(27821..28831)
-----------------
DNA (1011bp)
protein (337aa)
phenylalanyl-tRNA synthetase subunit alpha; K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20] Tax=GWF2_WWE1X_40_14_curated
Phenylalanine--tRNA ligase alpha subunit id=3863246 bin=GWF2_WWE1_40_14 species=Clostridium leptum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
phenylalanyl-tRNA synthetase subunit alpha
DolZOral124_scaffold_1209_trna_3
unknown

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comp(29145..29229)
-----------------
DNA (85bp)
transferRNA
DolZOral124_scaffold_1209_trna_2
unknown

Not on your lists

comp(29251..29322)
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_1209_trna_1
unknown

Not on your lists

comp(29334..29405)
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_1209_23

Not on your lists

comp(29662..29991)
-----------------
DNA (330bp)
protein (110aa)
Marine sediment metagenome DNA, contig: S03H2_S21380 {ECO:0000313|EMBL:GAH77956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Biotin/lipoyl attachment domain-containing protein id=4245366 bin=GWF2_Bacteroidetes_38_335 species=Odoribacter splanchnicus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
biotin/lipoyl attachment domain-containing protein
DolZOral124_scaffold_1209_24
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(30045..31583)
-----------------
DNA (1539bp)
protein (513aa)
propionyl-CoA carboxylase (EC:6.4.1.3) Tax=GWE2_Bacteroidetes_40_63_curated
Propionyl-CoA carboxylase id=4084109 bin=GWF2_Bacteroidetes_40_13 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes
methylmalonyl-CoA carboxyltransferase
DolZOral124_scaffold_1209_25
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(31673..32128)
-----------------
DNA (456bp)
protein (152aa)
id=2962966 bin=GWF2_WWE1_40_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_WWE1_40_14 organism_group=WWE1
id=2962966 Tax=GWF2_WWE1X_40_14_curated
DolZOral124_scaffold_1209_26
GWF2_WWE1X_40_14_curated, WWE1X, Bacteria

Not on your lists

comp(32133..33365)
-----------------
DNA (1233bp)
protein (411aa)
Type II secretion system protein id=2962963 bin=GWF2_WWE1_40_14 species=Hydrogenophaga sp. PBC genus=Hydrogenophaga taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_WWE1_40_14 organism_group=WWE1 rbh
pilC; type 4 fimbrial assembly protein pilC, gspF family; K02653 type IV pilus assembly protein PilC Tax=GWF2_WWE1X_40_14_curated
pilC; type IV pilus assembly protein PilC
Displaying items 1-30 of 38 in total

View Taxonomy