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DolZOral124_scaffold_1211

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1211_1
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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160..1086
-----------------
DNA (927bp)
protein (309aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. CAG:131 RepID=R6LAK8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KDR94799.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
hypothetical protein
DolZOral124_scaffold_1211_2
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1074..1916
-----------------
DNA (843bp)
protein (281aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=12 Tax=Clostridium difficile RepID=T2V6W1_CLODI
hemK; protein methyltransferase
DolZOral124_scaffold_1211_3
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1920..2984
-----------------
DNA (1065bp)
protein (355aa)
Peptide chain release factor 1 n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0L1_9FIRM
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=500633 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococc
prfA; peptide chain release factor 1
DolZOral124_scaffold_1211_4
unknown

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comp(3012..3224)
-----------------
DNA (213bp)
protein (71aa)

This feature has no annotations

DolZOral124_scaffold_1211_5
Halanaerobium saccharolyticum, Halanaerobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3239..5581)
-----------------
DNA (2343bp)
protein (781aa)
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) n=1 Tax=Halanaerobium saccharolyticum subsp. saccharolyticum DSM 6643 RepID=M5EFX6_9FIRM
Diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(S) {ECO:0000313|EMBL:CCU80133.1}; TaxID=1293054 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobia
diguanylate cyclase/phosphodiesterase with extracellular sensor
DolZOral124_scaffold_1211_6
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5879..6748
-----------------
DNA (870bp)
protein (290aa)
Radical SAM domain protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A1J4_NATTJ
radical SAM protein
Radical SAM domain protein {ECO:0000313|EMBL:ACB84734.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermoph
DolZOral124_scaffold_1211_7
Actinomyces graevenitzii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6831..8144
-----------------
DNA (1314bp)
protein (438aa)
OmpA family protein n=1 Tax=Actinomyces graevenitzii F0530 RepID=U1R8D8_9ACTO
OmpA family protein {ECO:0000313|EMBL:ERH14782.1}; TaxID=1321817 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces graevenitzii F0530.;"
outer membrane protein/peptidoglycan-associated (lipo)protein
DolZOral124_scaffold_1211_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8267..10594
-----------------
DNA (2328bp)
protein (776aa)
ATP-dependent Clp protease ATP-binding subunit ClpA n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AX17_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpA {ECO:0000313|EMBL:EOD01207.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="
ATPase
DolZOral124_scaffold_1211_9
Treponema sp. OMZ 838, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(10698..12047)
-----------------
DNA (1350bp)
protein (450aa)
Xanthine permease n=2 Tax=Treponema vincentii RepID=S3MBB1_9SPIO
uracil permease rbh
Uracil permease {ECO:0000313|EMBL:AIW88868.1}; TaxID=1539298 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema sp. OMZ 838.;"
DolZOral124_scaffold_1211_10
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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12396..13799
-----------------
DNA (1404bp)
protein (468aa)
Amidohydrolase family protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0ACT3_9FIRM
Amidohydrolase family protein {ECO:0000313|EMBL:EDQ95742.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter ba
amidohydrolase 3
DolZOral124_scaffold_1211_11
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13808..14476
-----------------
DNA (669bp)
protein (223aa)
hypothetical protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000361D3BE
Hemolysin III family channel protein {ECO:0000313|EMBL:KHS57743.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrispor
hypothetical protein
DolZOral124_scaffold_1211_12
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14487..17150
-----------------
DNA (2664bp)
protein (888aa)
DNA polymerase I (EC:2.7.7.7)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" sour
DNA polymerase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MF83_ALKOO
DolZOral124_scaffold_1211_13
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17137..17754
-----------------
DNA (618bp)
protein (206aa)
dephospho-CoA kinase (EC:2.7.1.24)
Methylglyoxal synthase {ECO:0000256|SAAS:SAAS00089917}; EC=4.2.3.3 {ECO:0000256|SAAS:SAAS00089921};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halother
Dephospho-CoA kinase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D220_HALOH
DolZOral124_scaffold_1211_14
Bacteroides intestinalis CAG:315, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17763..19859
-----------------
DNA (2097bp)
protein (699aa)
Tetratricopeptide repeat protein n=1 Tax=Bacteroides intestinalis CAG:315 RepID=R7DS07_9BACE
Tetratricopeptide repeat protein {ECO:0000313|EMBL:CDD92788.1}; TaxID=1263048 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source
hypothetical protein
DolZOral124_scaffold_1211_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20036..22096
-----------------
DNA (2061bp)
protein (687aa)
Methyl-accepting chemotaxis protein n=2 Tax=Clostridium botulinum RepID=C3L1M2_CLOB6
methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis (MCP) signaling domain protein {ECO:0000313|EMBL:AJE12232.1}; TaxID=1408283 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
DolZOral124_scaffold_1211_16
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22299..23639
-----------------
DNA (1341bp)
protein (447aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9X3K4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL09969.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
aminotransferase class-III
DolZOral124_scaffold_1211_17
Firmicutes bacterium CAG:83, Firmicutes, Bacteria

Not on your lists

23675..24574
-----------------
DNA (900bp)
protein (300aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:83 RepID=R5D3X4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCX73484.1}; TaxID=1262992 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:83.;"
PhzF family phenazine biosynthesis protein
DolZOral124_scaffold_1211_18
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24824..25186
-----------------
DNA (363bp)
protein (121aa)
Bacterial regulatory s, gntR family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VNQ5_CLOBI
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:EQK43123.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[C
GntR family transcriptional regulator
DolZOral124_scaffold_1211_19
GWF2_Firmicutes_51_9_curated, Firmicutes, Bacteria

Not on your lists

25188..25880
-----------------
DNA (693bp)
protein (231aa)
Putative uncharacterized protein id=1975728 bin=GWE2_Firmicute_51_13 species=Holdemania filiformis genus=Holdemania taxon_order=Erysipelotrichales taxon_class=Erysipelotrichia phylum=Firmicutes tax=GWE2_Firmicute_51_13 organism_group=Firmicute organism_desc=Good +
ABC transporter ATP-binding protein Tax=GWF2_Firmicutes_51_9_curated
ABC transporter
DolZOral124_scaffold_1211_20
Dorea formicigenerans CAG:28, Dorea, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25882..26736
-----------------
DNA (855bp)
protein (285aa)
Uncharacterized protein n=2 Tax=Dorea RepID=R6TK96_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC59157.1}; TaxID=1263073 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Dorea; environmental samples.;" source="Dorea formicigen
DolZOral124_scaffold_1211_21
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27101..27817
-----------------
DNA (717bp)
protein (239aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TN69_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR47637.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus me
DolZOral124_scaffold_1211_22
unknown

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comp(27819..28169)
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

DolZOral124_scaffold_1211_23
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(28178..29626)
-----------------
DNA (1449bp)
protein (483aa)
Probable cytosol aminopeptidase n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CM58_9FIRM
Probable cytosol aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucine aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; Leucyl aminopeptidase {ECO:0000256|HAMAP-Rule:MF_00181}; TaxID=1321778 spec
hypothetical protein
DolZOral124_scaffold_1211_24
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29820..32207
-----------------
DNA (2388bp)
protein (796aa)
peptidase S16 with C-terminal Lon domain (EC:3.4.21.-)
Peptidase S16 with C-terminal Lon domain {ECO:0000313|EMBL:AFS79551.1}; EC=3.4.21.- {ECO:0000313|EMBL:AFS79551.1};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia
Peptidase S16 with C-terminal Lon domain n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B4Q3_CLOA9 rbh
DolZOral124_scaffold_1211_25
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

32239..34173
-----------------
DNA (1935bp)
protein (645aa)
ABC-type transporter, periplasmic subunit n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LWY6_TEPAE
ABC-type transporter, periplasmic subunit
ABC-type transporter, periplasmic subunit {ECO:0000313|EMBL:CCP25558.1}; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Tepidanaerobacter.;"
DolZOral124_scaffold_1211_26
Thermoanaerobacterium saccharolyticum, Thermoanaerobacterium, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34208..35596)
-----------------
DNA (1389bp)
protein (463aa)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VTI6_THESW
argininosuccinate lyase
DolZOral124_scaffold_1211_27
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35597..36844)
-----------------
DNA (1248bp)
protein (416aa)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=84022 species="Bacter
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D1C9_DESAJ
DolZOral124_scaffold_1211_28
unknown

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comp(36935..37114)
-----------------
DNA (180bp)
protein (60aa)

This feature has no annotations

DolZOral124_scaffold_1211_29
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

37302..38405
-----------------
DNA (1104bp)
protein (368aa)
Exonuclease SbcD n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AW62_9CLOT
Exonuclease SbcD {ECO:0000313|EMBL:EOD00872.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimatiensis.;
metallophosphoesterase
DolZOral124_scaffold_1211_30
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38395..40815
-----------------
DNA (2421bp)
protein (807aa)
Uncharacterized protein n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CAY7_9FIRM
hypothetical protein
Tax=BJP_IG2157_Clostridiales_35_16
Displaying items 1-30 of 32 in total

View Taxonomy