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DolZOral124_scaffold_1217

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1217_1
unknown

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2..322
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

DolZOral124_scaffold_1217_2
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(261..605)
-----------------
DNA (345bp)
protein (115aa)
Probable hydrogenase nickel incorporation protein HypA n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=HYPA_GEOUR
hydrogenase nickel incorporation protein HypA
Probable hydrogenase nickel incorporation protein HypA {ECO:0000255|HAMAP-Rule:MF_00213}; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoba
DolZOral124_scaffold_1217_3
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(621..1634)
-----------------
DNA (1014bp)
protein (338aa)
Hydrogenase expression/formation protein id=4263721 bin=GWF2_Bacteroidetes_33_38 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
hypE; HypE protein
Tax=BJP_08E140C01_Bacteriodales_41_10
DolZOral124_scaffold_1217_4
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1653..2729)
-----------------
DNA (1077bp)
protein (359aa)
Hydrogenase expression/formation protein HypD id=4463382 bin=GWF2_Bacteroidetes_38_335 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=GWF2_Bacteroidetes_38_335_curated
hypD; hydrogenase expression/formation protein HypD
DolZOral124_scaffold_1217_5
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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comp(2726..2974)
-----------------
DNA (249bp)
protein (83aa)
HypC hydrogenase expression/formation protein id=4342505 bin=GWF2_Bacteroidetes_43_63 species=Thermococcus onnurineus genus=Thermococcus taxon_order=Thermococcales taxon_class=Thermococci phylum=Euryarchaeota tax=GWF2_Bacteroidetes_43_63 organism_group=Bacteroidetes organism_desc=a77
hydrogenase expression/formation protein HypC; K04653 hydrogenase expression/formation protein HypC Tax=GWF2_Bacteroidetes_43_63_curated
hydrogenase assembly chaperone HypC/HupF
DolZOral124_scaffold_1217_6
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3016..5361)
-----------------
DNA (2346bp)
protein (782aa)
Carbamoyltransferase HypF id=3366917 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=Parabacteroides taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11 rbh
hydrogenase maturation factor
Tax=BJP_08E140C01_Bacteriodales_41_10
DolZOral124_scaffold_1217_7
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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5455..6075
-----------------
DNA (621bp)
protein (207aa)
Redox-sensing transcriptional repressor rex id=4278338 bin=GWF2_Planctomycete_41_51 species=Brachyspira murdochii genus=Brachyspira taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWF2_Planctomycete_41_51 organism_group=Planctomycetes organism_desc=a211
CoA-binding protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1217_8
GWF2_RBX1_35_9_curated, RBX1, Bacteria

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6096..7892
-----------------
DNA (1797bp)
protein (599aa)
hoxF; NAD-reducing hydrogenase diaphorase moiety large subunit; K00436 hydrogen dehydrogenase [EC:1.12.1.2] Tax=GWF2_RBX1_35_9_curated
NAD-reducing hydrogenase HoxS subunit alpha id=3937534 bin=GWF2_OP9_related_35_9 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria) rbh
nuoF; NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
DolZOral124_scaffold_1217_9
RIFOXYB2_FULL_Elusimicrobia_49_7_curated, Elusimicrobia, Bacteria

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7904..8611
-----------------
DNA (708bp)
protein (236aa)
ferredoxin; K00436 hydrogen dehydrogenase [EC:1.12.1.2] Tax=RIFOXYB2_FULL_Elusimicrobia_49_7_curated
NAD-reducing hydrogenase, gamma subunit id=3937532 bin=GWF2_OP9_related_35_9 species=Mariprofundus ferrooxydans genus=Mariprofundus taxon_order=Mariprofundales taxon_class=Zetaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria) rbh
ferredoxin
DolZOral124_scaffold_1217_10
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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8623..9171
-----------------
DNA (549bp)
protein (183aa)
NAD-reducing hydrogenase hoxS subunit delta id=2012329 bin=GWE2_Bacteroidetes_42_42 species=unknown genus=unknown taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good + rbh
hoxY; NAD-reducing hydrogenase hoxS subunit delta Tax=GWF2_Bacteroidetes_43_63_curated
hoxY; NAD-reducing hydrogenase hoxS subunit delta
DolZOral124_scaffold_1217_11
RBG_13_Spirochaetes_51_14_curated, Spirochaetes, Bacteria

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9183..10634
-----------------
DNA (1452bp)
protein (484aa)
coenzyme F420-reducing hydrogenase subunit alpha Tax=RBG_13_Spirochaetes_51_14_curated
Coenzyme F420-reducing hydrogenase, alpha subunit id=3937528 bin=GWF2_OP9_related_35_9 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria) rbh
coenzyme F420-reducing hydrogenase subunit alpha
DolZOral124_scaffold_1217_12
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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10718..11194
-----------------
DNA (477bp)
protein (159aa)
HoxW id=2664842 bin=GWF2_Bacteroidetes_38_335 species=Rhodococcus opacus genus=Rhodococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hoxW; (NiFe) hydrogenase Tax=GWF2_Bacteroidetes_38_335_curated
hydrogenase maturation protease
DolZOral124_scaffold_1217_13
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11207..11722)
-----------------
DNA (516bp)
protein (172aa)
Cob(I)alamin adenosyltransferase n=1 Tax=Kosmotoga olearia (strain TBF 19.5.1) RepID=C5CEY8_KOSOT
cobinamide adenolsyltransferase
Cobinamide adenolsyltransferase {ECO:0000313|EMBL:AHW60484.1}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacter
DolZOral124_scaffold_1217_14
Prevotella histicola, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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11799..12335
-----------------
DNA (537bp)
protein (179aa)
phosphoglycerate mutase (EC:5.4.2.1)
Putative uncharacterized protein n=1 Tax=Prevotella histicola F0411 RepID=G6ADF2_9BACT
Phosphoglycerate mutase {ECO:0000313|EMBL:KGF26786.1}; TaxID=1236504 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella histicola JCM 15637
DolZOral124_scaffold_1217_15
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12364..12882
-----------------
DNA (519bp)
protein (173aa)
Adenosylcobinamide-phosphate guanylyltransferase (EC:2.7.7.62)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00037685A4
Adenosylcobinamide-phosphate guanylyltransferase {ECO:0000313|EMBL:GAO28077.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofi
DolZOral124_scaffold_1217_16
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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12888..13886
-----------------
DNA (999bp)
protein (333aa)
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00230, ECO:0000256|SAAS:SAAS00013344}; Short=NN:DBI PRT {ECO:0000256|HAMAP-Rule:MF_00230};; EC=2.4.2.2
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003707EA2
nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
DolZOral124_scaffold_1217_17
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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13886..14650
-----------------
DNA (765bp)
protein (255aa)
Adenosylcobinamide-GDP ribazoletransferase {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154501}; EC=2.7.8.26 {ECO:0000256|HAMAP-Rule:MF_00719, ECO:0000256|SAAS:SAAS00154502};; Cobalamin sy
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI00036A4C3C
cobalamin synthase
DolZOral124_scaffold_1217_18
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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14647..15201
-----------------
DNA (555bp)
protein (185aa)
alpha-ribazole-5-phosphate phosphatase n=1 Tax=Methylotenera mobilis RepID=UPI00035F211B
Alpha-ribazole phosphatase {ECO:0000313|EMBL:KKB45311.1}; TaxID=927665 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides gold
alpha-ribazole phosphatase
DolZOral124_scaffold_1217_19
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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15219..16664
-----------------
DNA (1446bp)
protein (482aa)
cobyric acid synthase n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EB792
Cobyric acid synthase {ECO:0000256|HAMAP-Rule:MF_00028, ECO:0000256|SAAS:SAAS00231811}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium
cobyric acid synthase
DolZOral124_scaffold_1217_20
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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16657..17685
-----------------
DNA (1029bp)
protein (343aa)
L-threonine-O-3-phosphate decarboxylase; K04720 threonine-phosphate decarboxylase [EC:4.1.1.81] Tax=GWB2_Bacteroidetes_41_8_curated
Aminotransferase class I and II n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QZ44_CHLT3
class I and II aminotransferase
DolZOral124_scaffold_1217_21
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17664..18620
-----------------
DNA (957bp)
protein (319aa)
hypothetical protein n=1 Tax=Proteiniphilum acetatigenes RepID=UPI0003797C19
Cobalamin biosynthesis protein CobD {ECO:0000256|HAMAP-Rule:MF_00024}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubic
cobalamin biosynthesis protein CobD
DolZOral124_scaffold_1217_22
Melioribacter roseus, Melioribacter, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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18717..21608
-----------------
DNA (2892bp)
protein (964aa)
Carbohydrate-binding CenC domain protein n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6ZPN8_MELRP
Carbohydrate-binding CenC domain protein
Carbohydrate-binding CenC domain protein {ECO:0000313|EMBL:AFN73994.1}; TaxID=1191523 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Melioribacteraceae; Melioribacter.;" source
DolZOral124_scaffold_1217_23
unknown

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21733..21864
-----------------
DNA (132bp)
protein (44aa)

This feature has no annotations

DolZOral124_scaffold_1217_24
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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21803..24106
-----------------
DNA (2304bp)
protein (768aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI000382D8CB
beta-Ig-H3/fasciclin Tax=GWB2_Bacteroidetes_41_8_curated
secreted/surface protein with fasciclin-like repeats
DolZOral124_scaffold_1217_25
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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24110..27343
-----------------
DNA (3234bp)
protein (1078aa)
SusC/RagA family TonB-linked outer membrane protein Tax=GWB2_Bacteroidetes_41_8_curated
TonB-dependent receptor plug id=2717606 bin=GWF2_Bacteroidetes_40_13 species=Echinicola vietnamensis genus=Echinicola taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_40_13 organism_group=Bacteroidetes rbh
SusC/RagA family TonB-linked outer membrane protein
DolZOral124_scaffold_1217_26
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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27363..28835
-----------------
DNA (1473bp)
protein (491aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI0003619C24 rbh
RagB/SusD family protein Tax=GWB2_Bacteroidetes_41_8_curated
membrane protein
DolZOral124_scaffold_1217_27
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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28842..30419
-----------------
DNA (1578bp)
protein (526aa)
Secreted/surface protein with fasciclin-like repeats n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0FX83_ECHVK
secreted/surface protein with fasciclin-like repeats Tax=GWB2_Bacteroidetes_41_8_curated
secreted/surface protein with fasciclin-like repeats
DolZOral124_scaffold_1217_28
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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30423..31961
-----------------
DNA (1539bp)
protein (513aa)
beta-Ig-H3/fasciclin Tax=GWB2_Bacteroidetes_41_8_curated
DolZOral124_scaffold_1217_29
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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31951..35112
-----------------
DNA (3162bp)
protein (1054aa)
TonB-dependent receptor n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S5R1_PEDSD
TonB-dependent receptor Tax=GWB2_Bacteroidetes_41_8_curated
TonB-dependent receptor
DolZOral124_scaffold_1217_30
GWB2_Bacteroidetes_41_8_curated, Bacteroidia, Bacteroidetes, Bacteria

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35117..36991
-----------------
DNA (1875bp)
protein (625aa)
Conserved domain protein n=1 Tax=Paraprevotella xylaniphila YIT 11841 RepID=F3QQI8_9BACT
RagB/SusD family protein Tax=GWB2_Bacteroidetes_41_8_curated
RagB/SusD family protein
Displaying items 1-30 of 32 in total

View Taxonomy