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DolZOral124_scaffold_1252

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1252_1
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..858
-----------------
DNA (858bp)
protein (286aa)
Homoserine dehydrogenase n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FRW3_PELBH
Homoserine dehydrogenase {ECO:0000313|EMBL:KHQ50430.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Ponticoccus sp.
Homoserine dehydrogenase
DolZOral124_scaffold_1252_2
Ponticoccus sp. UMTAT08, Ponticoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1246..2040
-----------------
DNA (795bp)
protein (265aa)
Phytanoyl-CoA dioxygenase family protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X3G3_9RHOB rbh
Putative phytanoyl-CoA dioxygenase {ECO:0000313|EMBL:KHQ55346.1}; TaxID=1515334 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ponticoccus.;" source="Pontic
putative phytanoyl-CoA dioxygenase
DolZOral124_scaffold_1252_3
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2593..3381)
-----------------
DNA (789bp)
protein (263aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DVE0_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EDM33364.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. TM
hypothetical protein
DolZOral124_scaffold_1252_4
Phaeobacter sp. S26, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3628..4530)
-----------------
DNA (903bp)
protein (301aa)
5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Ruegeria mobilis F1926 RepID=R0FDM3_9RHOB rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1569354 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter
DolZOral124_scaffold_1252_5
Thalassobium sp. R2A62, Thalassobium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4658..6334)
-----------------
DNA (1677bp)
protein (559aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=633131 spe
fhs; formate--tetrahydrofolate ligase Fhs (EC:6.3.4.3)
Formate--tetrahydrofolate ligase n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DBG0_9RHOB
DolZOral124_scaffold_1252_6
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6614..7249)
-----------------
DNA (636bp)
protein (212aa)
MOSC domain protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FTY2_9RHOB
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_1252_7
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7429..9729)
-----------------
DNA (2301bp)
protein (767aa)
OmpA domain protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNN2_RUEPO rbh
OmpA domain protein
OmpA domain protein {ECO:0000313|EMBL:AAV96406.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (strain
DolZOral124_scaffold_1252_8
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9733..10941)
-----------------
DNA (1209bp)
protein (403aa)
Cyclohexadienyl dehydrogenase {ECO:0000313|EMBL:EDM72635.1}; EC=1.3.1.12 {ECO:0000313|EMBL:EDM72635.1};; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobact
Cyclohexadienyl dehydrogenase n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNE9_9RHOB rbh
hypothetical protein
DolZOral124_scaffold_1252_9
Roseobacter sp. AzwK-3b, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11194..11721)
-----------------
DNA (528bp)
protein (176aa)
Cation transport protein n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FNE8_9RHOB
Cation transport protein {ECO:0000313|EMBL:EDM72634.1}; TaxID=351016 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. A
chaC; cation transport protein
DolZOral124_scaffold_1252_10
Roseovarius nubinhibens, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11801..12805
-----------------
DNA (1005bp)
protein (335aa)
Uncharacterized protein n=1 Tax=Roseovarius nubinhibens ISM RepID=A3SID7_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAP77118.1}; TaxID=89187 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius nubinhi
hypothetical protein
DolZOral124_scaffold_1252_11
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12959..14002)
-----------------
DNA (1044bp)
protein (348aa)
Oxidoreductase, aldo/keto reductase family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LTI1_RUEPO rbh
oxidoreductase, aldo/keto reductase family
Oxidoreductase, aldo/keto reductase family {ECO:0000313|EMBL:AAV94720.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ru
DolZOral124_scaffold_1252_12
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14228..14629
-----------------
DNA (402bp)
protein (134aa)
Dimethylglycine dehydrogenase, putative n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16AK6_ROSDO
Glycine cleavage system protein T {ECO:0000313|EMBL:KIC49526.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyam
dimethylglycine dehydrogenase
DolZOral124_scaffold_1252_13
unknown

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14711..14821
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

DolZOral124_scaffold_1252_14
Sulfitobacter pseudonitzschiae, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14910..16490)
-----------------
DNA (1581bp)
protein (527aa)
alkJ1; alcohol dehydrogenase AlkJ (EC:1.1.99.-)
Putative alcohol dehydrogenase protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EUF9_9RHOB rbh
Choline dehydrogenase {ECO:0000313|EMBL:KEJ95000.1}; TaxID=1402135 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter pse
DolZOral124_scaffold_1252_15
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16568..17557)
-----------------
DNA (990bp)
protein (330aa)
Uncharacterized protein n=1 Tax=Roseovarius sp. 217 RepID=A3W415_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ24521.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp. 21
type I secretion target repeat-containing protein
DolZOral124_scaffold_1252_16
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17705..18163)
-----------------
DNA (459bp)
protein (153aa)
HTH-type transcriptional regulator n=1 Tax=Roseobacter litoralis (strain ATCC 49566 / DSM 6996 / JCM 21268 / NBRC 15278 / OCh 149) RepID=F7ZFT0_ROSLO
HTH-type transcriptional regulator
AsnC family transcriptional regulator {ECO:0000313|EMBL:KIC21555.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leis
DolZOral124_scaffold_1252_17
Ruegeria sp. ANG-S4, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18315..19430
-----------------
DNA (1116bp)
protein (372aa)
Alanine dehydrogenase {ECO:0000256|PIRNR:PIRNR000183}; EC=1.4.1.1 {ECO:0000256|PIRNR:PIRNR000183};; TaxID=1577904 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterac
alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CQG7_9RHOB rbh
DolZOral124_scaffold_1252_18
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20401..20877)
-----------------
DNA (477bp)
protein (159aa)
Proline dehydrogenase transcriptional activator, putative n=1 Tax=Roseobacter sp. AzwK-3b RepID=A6FQ95_9RHOB
putR; proline dehydrogenase
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_1252_19
Roseovarius sp. TM1035, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20999..24433
-----------------
DNA (3435bp)
protein (1145aa)
Bifunctional PutA protein n=1 Tax=Roseovarius sp. TM1035 RepID=A6DXA3_9RHOB rbh
Bifunctional PutA protein {ECO:0000313|EMBL:EDM32735.1}; TaxID=391613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius sp.
putA; bifunctional PutA protein
DolZOral124_scaffold_1252_20
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24631..25368
-----------------
DNA (738bp)
protein (246aa)
Rhomboid family protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LP41_RUEPO rbh
Peptidase C54 {ECO:0000313|EMBL:KAJ02546.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneus
rhomboid family protein
DolZOral124_scaffold_1252_21
Pelagibaca bermudensis, Pelagibaca, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25365..25727
-----------------
DNA (363bp)
protein (121aa)
Uncharacterized protein n=1 Tax=Pelagibaca bermudensis (strain JCM 13377 / KCTC 12554 / HTCC2601) RepID=Q0FQV9_PELBH
Uncharacterized protein {ECO:0000313|EMBL:EAU46573.1}; TaxID=314265 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Pelagibaca.;" source="Pelagibaca bermuden
putative gluthatione-dependent formaldehyde-activating [GFA] family protein
DolZOral124_scaffold_1252_22
Ruegeria lacuscaerulensis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25958..26752)
-----------------
DNA (795bp)
protein (265aa)
Inositol-1-monophosphatase {ECO:0000313|EMBL:EEX10006.1}; EC=3.1.3.25 {ECO:0000313|EMBL:EEX10006.1};; TaxID=644107 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobactera
Archaeal fructose-1,6-bisphosphatase (EC:3.1.3.25)
Inositol-1-monophosphatase n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CVY3_9RHOB rbh
DolZOral124_scaffold_1252_23
Roseovarius sp. 217, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26771..27205)
-----------------
DNA (435bp)
protein (145aa)
Transcriptional regulator MetR n=1 Tax=Roseovarius sp. 217 RepID=A3W5X5_9RHOB
Transcriptional regulator MetR {ECO:0000313|EMBL:EAQ23970.1}; TaxID=314264 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="Roseovarius
metR; HTH-type transcriptional regulator MetR
DolZOral124_scaffold_1252_24
unknown

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comp(27302..27400)
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

DolZOral124_scaffold_1252_25
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27738..28226
-----------------
DNA (489bp)
protein (163aa)
Thioesterase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VHG7_9RHOB
Thioesterase family protein {ECO:0000313|EMBL:EAQ12158.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibac
phenylacetic acid degradation-like protein
DolZOral124_scaffold_1252_26
Sulfitobacter mediterraneus, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28303..29502)
-----------------
DNA (1200bp)
protein (400aa)
Beta-lactamase n=1 Tax=Rhodobacteraceae bacterium KLH11 RepID=B9NS33_9RHOB rbh
Beta-lactamase {ECO:0000313|EMBL:KAJ01776.1}; TaxID=83219 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sulfitobacter.;" source="Sulfitobacter mediterraneu
beta-lactamase
DolZOral124_scaffold_1252_27
Sulfitobacter guttiformis, Sulfitobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29499..30200)
-----------------
DNA (702bp)
protein (234aa)
Branched-chain amino acid ABC transporter, ATP-binding protein LivF n=1 Tax=Sulfitobacter guttiformis RepID=J7FXV5_9RHOB rbh
Branched-chain amino acid ABC transporter, ATP-binding protein LivF {ECO:0000313|EMBL:AFP55450.1}; TaxID=74349 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae
ABC transporter
DolZOral124_scaffold_1252_28
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30200..30955)
-----------------
DNA (756bp)
protein (252aa)
ABC transporter, permease/ATP-binding protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6ATY6_9RHOB rbh
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC48819.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacterace
ABC transporter
DolZOral124_scaffold_1252_29
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30952..32244)
-----------------
DNA (1293bp)
protein (431aa)
ABC-type transporter, permease component n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQW1_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:KIC48818.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp.
h16_A1522; ABC-type transporter, permease component
DolZOral124_scaffold_1252_30
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32241..33197)
-----------------
DNA (957bp)
protein (319aa)
Branched-chain amino acid ABC transporter, permease protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RQW0_9RHOB rbh
ABC transporter permease {ECO:0000313|EMBL:KIC48817.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp.
inner-membrane translocator
Displaying items 1-30 of 38 in total

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