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DolZOral124_scaffold_1254

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1254_1
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(120..1337)
-----------------
DNA (1218bp)
protein (406aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PT97_CLOSD
conserved membrane protein of unknown function
Uncharacterized protein {ECO:0000313|EMBL:CBH22101.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
DolZOral124_scaffold_1254_2
Clostridium sp. CAG:590, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1521..2303
-----------------
DNA (783bp)
protein (261aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:590 RepID=R5EMG4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCX89246.1}; TaxID=1262825 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
DolZOral124_scaffold_1254_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2321..3175
-----------------
DNA (855bp)
protein (285aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UUE6_CLOBO
DolZOral124_scaffold_1254_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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3190..4041
-----------------
DNA (852bp)
protein (284aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
Pantothenate synthetase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUW8_9CLOT
pantoate--beta-alanine ligase
DolZOral124_scaffold_1254_5
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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4042..4389
-----------------
DNA (348bp)
protein (116aa)
aspartate 1-decarboxylase (EC:4.1.1.11)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
aspartate decarboxylase n=1 Tax=Paenibacillus massiliensis RepID=UPI0003764F7E
DolZOral124_scaffold_1254_6
Caloramator australicus, Caloramator, Clostridiales, Clostridia, Firmicutes, Bacteria

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4398..5312
-----------------
DNA (915bp)
protein (305aa)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-ace
UDP-N-acetylmuramate dehydrogenase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Caloramator australicus RC3 RepID=I7KUG1_9CLOT
DolZOral124_scaffold_1254_7
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5488..6615
-----------------
DNA (1128bp)
protein (376aa)
RNA binding S1 domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRF8_ALKMQ
RNA-binding S1 domain-containing protein
RNA binding S1 domain protein {ECO:0000313|EMBL:ABR48776.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens
DolZOral124_scaffold_1254_8
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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6960..8150
-----------------
DNA (1191bp)
protein (397aa)
Putative cell division protein FtsA n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EHW1_9FIRM
Putative cell division protein FtsA {ECO:0000313|EMBL:ERI94167.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0540.;
type IV pilus assembly protein PilM
DolZOral124_scaffold_1254_9
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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8152..8718
-----------------
DNA (567bp)
protein (189aa)
Fimbrial assembly family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTT3_ALKMQ
fimbrial assembly family protein
Fimbrial assembly family protein {ECO:0000313|EMBL:ABR49601.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredig
DolZOral124_scaffold_1254_10
Paramecium tetraurelia, Paramecium, Peniculida, Oligohymenophorea, Eukaryota

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8702..10615
-----------------
DNA (1914bp)
protein (638aa)
Chromosome undetermined scaffold_96, whole genome shotgun sequence n=1 Tax=Paramecium tetraurelia RepID=A0EH68_PARTE
Chromosome undetermined scaffold_96, whole genome shotgun sequence {ECO:0000313|EMBL:CAK94659.1}; TaxID=5888 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; Peniculid
hypothetical protein
DolZOral124_scaffold_1254_11
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10646..12256
-----------------
DNA (1611bp)
protein (537aa)
S-layer domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TTT1_ALKMQ
S-layer protein
S-layer domain protein {ECO:0000313|EMBL:ABR49599.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus met
DolZOral124_scaffold_1254_12
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12303..12932
-----------------
DNA (630bp)
protein (210aa)
putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD (EC:3.4.23.43)
Putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD {ECO:0000313|EMBL:CBH20350.1}; EC=3.4.23.43 {ECO:0000313|EMBL:CBH20350.1};; TaxID=499177 species="Bacteria; Firmicut
Putative Type IV fimbrial biogenesis protein, prepilin cysteine protease (C20) PilD n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PU89_CLOSD
DolZOral124_scaffold_1254_13
Eubacterium saphenum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12946..13503
-----------------
DNA (558bp)
protein (186aa)
Elongation factor P n=1 Tax=Eubacterium saphenum ATCC 49989 RepID=C7GYM2_9FIRM
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=592031 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium
elongation factor P
DolZOral124_scaffold_1254_14
Catenovulum agarivorans, Catenovulum, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13514..15109
-----------------
DNA (1596bp)
protein (532aa)
hypothetical protein, partial n=1 Tax=Streptococcus thoraltensis RepID=UPI000371A923
Uncharacterized protein {ECO:0000313|EMBL:EWH10004.1}; Flags: Fragment;; TaxID=1328313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Catenovulum.;" source=
hypothetical protein
DolZOral124_scaffold_1254_15
Syntrophomonas wolfei, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

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15135..15527
-----------------
DNA (393bp)
protein (131aa)
Putative uncharacterized protein n=1 Tax=Syntrophomonas wolfei subsp. wolfei (strain DSM 2245B / Goettingen) RepID=Q0AZG0_SYNWW
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABI67894.1}; TaxID=335541 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas wolfei subsp
DolZOral124_scaffold_1254_16
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15520..15885
-----------------
DNA (366bp)
protein (122aa)
N utilization substance protein B homolog n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QHR0_9FIRM
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=864565 species="Bacteria; Firmi
nusB; transcription antitermination protein NusB
DolZOral124_scaffold_1254_17
R_Deltaproteobacteria_38_15, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15894..16748
-----------------
DNA (855bp)
protein (285aa)
5, 10-methylenetetrahydrofolate dehydrogenase (NADP+), methenyltetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5
bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/5,10-methylene-tetrahydrofolate cyclohydrolase; K01491 methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase [EC:1.5.1.5 3.5.4.9] id=24609601 bin=RAAC11 species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=RAAC11 organism_group=Unknown_CP
5,10-methylene-tetrahydrofolate dehydrogenase
DolZOral124_scaffold_1254_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16738..17931
-----------------
DNA (1194bp)
protein (398aa)
xseA; exodeoxyribonuclease VII, large subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclea
Exodeoxyribonuclease 7 large subunit n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PRG3_CLOSD
DolZOral124_scaffold_1254_19
unknown

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17924..18124
-----------------
DNA (201bp)
protein (67aa)

This feature has no annotations

DolZOral124_scaffold_1254_20
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18127..19008
-----------------
DNA (882bp)
protein (294aa)
5'-nucleotidase (EC:3.1.3.5)
5'-nucleotidase {ECO:0000313|EMBL:ADL51382.1}; EC=3.1.3.5 {ECO:0000313|EMBL:ADL51382.1};; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
5'-nucleotidase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SX21_CLOC7
DolZOral124_scaffold_1254_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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19018..19875
-----------------
DNA (858bp)
protein (286aa)
Geranylgeranyl pyrophosphate synthase n=1 Tax=Thermoanaerobacterium thermosaccharolyticum M0795 RepID=L0IHC9_THETR
geranylgeranyl pyrophosphate synthase
Uncharacterized protein {ECO:0000313|EMBL:ETD16663.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
DolZOral124_scaffold_1254_22
Filifactor alocis, Filifactor, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19940..20623)
-----------------
DNA (684bp)
protein (228aa)
Sortase family protein n=1 Tax=Filifactor alocis (strain ATCC 35896 / D40 B5) RepID=D6GTC6_FILAD
sortase family protein
Sortase family protein {ECO:0000313|EMBL:EFE27733.2}; TaxID=546269 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Filifactor.;" source="Filifactor alocis (strain ATCC
DolZOral124_scaffold_1254_23
unknown

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20906..21097
-----------------
DNA (192bp)
protein (64aa)

This feature has no annotations

DolZOral124_scaffold_1254_24
GWC2_TM7_48_9, Candidatus Saccharibacteria, Bacteria

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21155..22336
-----------------
DNA (1182bp)
protein (394aa)
Conserved repeat protein id=3782362 bin=GWC2_TM7_48_9 species=Lachnospiraceae bacterium oral taxon 082 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_TM7_48_9 organism_group=TM7 organism_desc=Good
Conserved repeat protein Tax=GWC2_TM7_48_9
exported protein of unknown function
DolZOral124_scaffold_1254_25
Enterococcus mundtii, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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22730..28030
-----------------
DNA (5301bp)
protein (1767aa)
Uncharacterized protein n=1 Tax=Enterococcus mundtii QU 25 RepID=V5XM14_ENTMU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAO06088.1}; TaxID=1300150 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus mundtii QU 25.;"
DolZOral124_scaffold_1254_26
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28216..29520
-----------------
DNA (1305bp)
protein (435aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1121324 speci
rho; transcription termination factor Rho (EC:3.6.1.-)
Transcription termination factor Rho n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AXX9_CLOA9
DolZOral124_scaffold_1254_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29550..30359
-----------------
DNA (810bp)
protein (270aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000
Shikimate dehydrogenase n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C7Y8_9FIRM
aroE; shikimate 5-dehydrogenase
DolZOral124_scaffold_1254_28
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30353..30865
-----------------
DNA (513bp)
protein (171aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6EXU1_9CLOT
DolZOral124_scaffold_1254_29
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30856..31944
-----------------
DNA (1089bp)
protein (363aa)
Ribosome-binding ATPase YchF n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CG84_9CLOT
Ribosome-binding ATPase YchF {ECO:0000256|HAMAP-Rule:MF_00944}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter k
GTP-binding protein YchF
DolZOral124_scaffold_1254_30
Fervidicella metallireducens, Fervidicella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31944..32582
-----------------
DNA (639bp)
protein (213aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Caloramator australicus RC3 RepID=I7KU03_9CLOT
cytidylate kinase
Displaying items 1-30 of 37 in total

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