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DolZOral124_scaffold_1267

Search features with annotation key words

Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1267_1
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..285)
-----------------
DNA (285bp)
protein (95aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PME9_CHIPD
Crp/Fnr family transcriptional regulator
Putative transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:ACU64054.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;"
DolZOral124_scaffold_1267_2
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(506..2044)
-----------------
DNA (1539bp)
protein (513aa)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WDZ5_PSYWF rbh
amidophosphoribosyltransferase
DolZOral124_scaffold_1267_3
Psychrobacter sp. JCM 18903, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2200..2712)
-----------------
DNA (513bp)
protein (171aa)
colicin V production protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289D557
Colicin V production protein {ECO:0000313|EMBL:GAF60803.1}; TaxID=1298610 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
colicin V production protein
DolZOral124_scaffold_1267_4
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2754..3794)
-----------------
DNA (1041bp)
protein (347aa)
Dihydroorotate dehydrogenase (quinone) {ECO:0000255|HAMAP-Rule:MF_00225}; EC=1.3.5.2 {ECO:0000255|HAMAP-Rule:MF_00225};; DHOdehase {ECO:0000255|HAMAP-Rule:MF_00225}; Short=DHOD {ECO:0000255|HAMAP-Rule
Dihydroorotate dehydrogenase (quinone) n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=PYRD_PSYA2 rbh
pyrD; dihydroorotate dehydrogenase 2
DolZOral124_scaffold_1267_5
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3919..4359)
-----------------
DNA (441bp)
protein (147aa)
membrane protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287C7AC
putative transmembrane protein
Putative transmembrane protein {ECO:0000313|EMBL:ABE74881.1}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacte
DolZOral124_scaffold_1267_6
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4687..5553
-----------------
DNA (867bp)
protein (289aa)
Putative uncharacterized protein n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QAS4_PSYCK
16S ribosomal RNA methyltransferase RsmE
Uncharacterized protein {ECO:0000313|EMBL:ABE75229.1}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter cryoh
DolZOral124_scaffold_1267_7
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5804..7591
-----------------
DNA (1788bp)
protein (596aa)
acyl-CoA dehydrogenase n=1 Tax=Psychrobacter lutiphocae RepID=UPI0003716071
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:GAF59575.1}; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp. J
acyl-CoA dehydrogenase-like protein
DolZOral124_scaffold_1267_8
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7749..9551
-----------------
DNA (1803bp)
protein (601aa)
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EGK15088.1}; EC=1.3.8.- {ECO:0000313|EMBL:EGK15088.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; P
Acyl-CoA dehydrogenase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5SMY8_9GAMM rbh
acyl-CoA dehydrogenase
DolZOral124_scaffold_1267_9
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9584..12004
-----------------
DNA (2421bp)
protein (807aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1298607 species="Bacteria;
Replication restart DNA helicase PriA n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WCY7_PSYWF rbh
primosomal protein N'
DolZOral124_scaffold_1267_10
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12561..13283)
-----------------
DNA (723bp)
protein (241aa)
YggS family pyridoxal phosphate enzyme n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5ST01_9GAMM rbh
YggS family pyridoxal phosphate enzyme {ECO:0000313|EMBL:EGK09479.1}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psy
hypothetical protein
DolZOral124_scaffold_1267_11
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13321..14355
-----------------
DNA (1035bp)
protein (345aa)
Pilus retraction ATPase PilT n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QE26_PSYCK
twitching motility protein
Pilus retraction ATPase PilT {ECO:0000313|EMBL:ABE74077.1}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter
DolZOral124_scaffold_1267_12
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(14478..14909)
-----------------
DNA (432bp)
protein (144aa)
Ferric uptake regulation protein FUR n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4TAI1_9GAMM
Ferric uptake regulation protein FUR {ECO:0000313|EMBL:ERL55493.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psych
ferric uptake regulator family protein
DolZOral124_scaffold_1267_13
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15071..15451
-----------------
DNA (381bp)
protein (127aa)
Outer membrane protein assembly factor BamE n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WGN5_PSYWF
SmpA/OmlA domain-containing protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; P
DolZOral124_scaffold_1267_14
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15584..15964)
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein n=1 Tax=Psychrobacter lutiphocae RepID=UPI00037879DA
UPF0125 protein HMPREF9373_2190 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychr
hypothetical protein
DolZOral124_scaffold_1267_15
Psychrobacter arcticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15977..17077)
-----------------
DNA (1101bp)
protein (367aa)
Uncharacterized protein n=1 Tax=Psychrobacter arcticus (strain DSM 17307 / 273-4) RepID=Q4FV26_PSYA2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ18132.1}; TaxID=259536 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter arcti
DolZOral124_scaffold_1267_16
Psychrobacter sp. JCM 18901, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17335..17976
-----------------
DNA (642bp)
protein (214aa)
GTP-binding protein YsxC n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI0002887452 rbh
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=1298609 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psyc
engB; ribosome biogenesis GTP-binding protein YsxC
DolZOral124_scaffold_1267_17
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(18018..18824)
-----------------
DNA (807bp)
protein (269aa)
Putative Zn-dependent hydrolase protein n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4TBK5_9GAMM
Putative Zn-dependent hydrolase protein {ECO:0000313|EMBL:ERL56084.1}; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Ps
beta-lactamase domain-containing protein
DolZOral124_scaffold_1267_18
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19065..20081)
-----------------
DNA (1017bp)
protein (339aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellace
23S rRNA pseudouridine synthase n=1 Tax=Psychrobacter lutiphocae RepID=UPI00035C8186 rbh
RluA family pseudouridine synthase
DolZOral124_scaffold_1267_19
Moraxella bovoculi, Moraxella, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21071..24577
-----------------
DNA (3507bp)
protein (1169aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=743974 species="Bacteria; Proteobacteria; Gam
rne; Ribonuclease E (EC:3.1.26.12) rbh
Ribonuclease E n=1 Tax=Enhydrobacter aerosaccus SK60 RepID=C8PW15_9GAMM rbh
DolZOral124_scaffold_1267_20
unknown

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comp(24528..24635)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

DolZOral124_scaffold_1267_21
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(24723..25637)
-----------------
DNA (915bp)
protein (305aa)
membrane protein n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000287C6DB rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE76291.1}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter cryoh
DolZOral124_scaffold_1267_22
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25897..26691
-----------------
DNA (795bp)
protein (265aa)
Putative thiol:disulfide interchange protein n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QE39_PSYCK
Thiol:disulfide interchange protein DsbC {ECO:0000313|EMBL:GAF51941.1}; TaxID=1298608 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="P
putative thiol:disulfide interchange protein
DolZOral124_scaffold_1267_23
Psychrobacter aquaticus, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26713..28047
-----------------
DNA (1335bp)
protein (445aa)
Homoserine dehydrogenase {ECO:0000256|RuleBase:RU000579}; EC=1.1.1.3 {ECO:0000256|RuleBase:RU000579};; TaxID=1354303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellac
Homoserine dehydrogenase n=1 Tax=Psychrobacter aquaticus CMS 56 RepID=U4T5R3_9GAMM
homoserine dehydrogenase
DolZOral124_scaffold_1267_24
Psychrobacter sp. 1501(2011), Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28207..29388
-----------------
DNA (1182bp)
protein (394aa)
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EGK08466.1}; EC=2.3.1.9 {ECO:0000313|EMBL:EGK08466.1};; TaxID=1002339 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellac
Acetyl-CoA acetyltransferase n=1 Tax=Psychrobacter sp. 1501(2011) RepID=F5STF6_9GAMM rbh
acetyl-CoA acetyltransferase
DolZOral124_scaffold_1267_trna_1
unknown

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comp(29550..29622)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1267_25
Psychrobacter sp. JCM 18902, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(29773..30597)
-----------------
DNA (825bp)
protein (275aa)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical {ECO:0000256|SAAS:SAAS00088338}; EC=3.6.1.41 {ECO:0000256|SAAS:SAAS00088330};; TaxID=1298607 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pse
Bis(5'-nucleosyl)-tetraphosphatase (Symmetrical) n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1QAR9_PSYCK rbh
apaH; diadenosine tetraphosphatase
DolZOral124_scaffold_1267_26
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30645..31496)
-----------------
DNA (852bp)
protein (284aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=RSMA_PSYCK
ksgA; dimethyladenosine transferase
DolZOral124_scaffold_1267_27
Psychrobacter sp. JCM 18900, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(31754..32812)
-----------------
DNA (1059bp)
protein (353aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
pdxA; pyridoxal phosphate biosynthetic protein (EC:1.1.1.262)
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Psychrobacter sp. PAMC 21119 RepID=UPI000289D36E
DolZOral124_scaffold_1267_28
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33039..34448
-----------------
DNA (1410bp)
protein (470aa)
Primary replicative DNA helicase {ECO:0000313|EMBL:ABQ93855.1}; EC=3.6.1.- {ECO:0000313|EMBL:ABQ93855.1};; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxel
Primary replicative DNA helicase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WDW4_PSYWF
replicative DNA helicase
DolZOral124_scaffold_1267_29
Psychrobacter sp. G, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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34517..35638
-----------------
DNA (1122bp)
protein (374aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=571800 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae;
Alanine racemase n=1 Tax=Psychrobacter sp. G RepID=S4Z3N9_9GAMM rbh
alanine racemase
Displaying items 1-30 of 34 in total

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