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DolZOral124_scaffold_1272

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1272_1
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..1167)
-----------------
DNA (1167bp)
protein (389aa)
2-methylcitrate dehydratase 2 {ECO:0000313|EMBL:EEW59066.1}; EC=4.2.1.79 {ECO:0000313|EMBL:EEW59066.1};; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobact
2-methylcitrate dehydratase (EC:4.2.1.79)
2-methylcitrate dehydratase 2 n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9CWP8_9RHOB rbh
DolZOral124_scaffold_1272_2
Rhodobacter capsulatus, Rhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1182..1568)
-----------------
DNA (387bp)
protein (129aa)
Acyl-CoA hydrolase n=3 Tax=Rhodobacter capsulatus RepID=V8GVU6_RHOCA
thioesterase superfamily protein
Acyl-CoA hydrolase {ECO:0000313|EMBL:ETE52259.1}; TaxID=1415161 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter.;" source="Rhodobacter capsulatus
DolZOral124_scaffold_1272_3
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1708..3096
-----------------
DNA (1389bp)
protein (463aa)
DNA-binding protein n=2 Tax=Ruegeria RepID=C9CWQ0_9RHOB
DNA-binding protein {ECO:0000313|EMBL:EEW59237.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Silicibacter sp. TrichCH4
hypothetical protein
DolZOral124_scaffold_1272_4
Paracoccus halophilus, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3156..4766)
-----------------
DNA (1611bp)
protein (537aa)
Isocitrate lyase {ECO:0000313|EMBL:KGJ03085.1}; EC=4.1.3.1 {ECO:0000313|EMBL:KGJ03085.1};; TaxID=376733 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Parac
isocitrate lyase n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558136 rbh
isocitrate lyase
DolZOral124_scaffold_1272_5
Rhodovulum sulfidophilum, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4890..6584)
-----------------
DNA (1695bp)
protein (565aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=35806 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rho
malate synthase n=1 Tax=Meganema perideroedes RepID=UPI00036B11D1 rbh
malate synthase
DolZOral124_scaffold_1272_6
Paenirhodobacter enshiensis, Paenirhodobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6663..8102
-----------------
DNA (1440bp)
protein (480aa)
DNA-binding protein n=1 Tax=Oceanicola sp. S124 RepID=UPI0002558605 rbh
DNA-binding protein {ECO:0000313|EMBL:KFI30112.1}; TaxID=1105367 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paenirhodobacter.;" source="Paenirhodobacter
DNA-binding protein
DolZOral124_scaffold_1272_7

Not on your lists

comp(8168..8443)
-----------------
DNA (276bp)
protein (92aa)
hypothetical protein n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI00037E0530
Marine sediment metagenome DNA, contig: S01H1_L00529 {ECO:0000313|EMBL:GAF84465.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
transposase-like protein
DolZOral124_scaffold_1272_8
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8443..9012)
-----------------
DNA (570bp)
protein (190aa)
Uncharacterized protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QDZ4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:AHY55739.1}; TaxID=476282 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium jap
hypothetical protein
DolZOral124_scaffold_1272_9
Sagittula stellata, Sagittula, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9489..10472)
-----------------
DNA (984bp)
protein (328aa)
Alcohol dehydrogenase, zinc-containing n=1 Tax=Sagittula stellata E-37 RepID=A3K9C3_9RHOB rbh
Alcohol dehydrogenase, zinc-containing {ECO:0000313|EMBL:EBA06295.1}; TaxID=388399 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Sagittula.;" source="Sagit
quinone oxidoreductase
DolZOral124_scaffold_1272_10
Silicibacter sp. TrichCH4B, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10483..11178)
-----------------
DNA (696bp)
protein (232aa)
RpsU-divergently transcribed protein n=1 Tax=Silicibacter sp. TrichCH4B RepID=C9D035_9RHOB rbh
RpsU-divergently transcribed protein {ECO:0000313|EMBL:EEW57841.1}; TaxID=644076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Siliciba
hypothetical protein
DolZOral124_scaffold_1272_11
Oceanibulbus indolifex, Oceanibulbus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11287..11493
-----------------
DNA (207bp)
protein (69aa)
30S ribosomal protein S21 n=3 Tax=Rhodobacteraceae RepID=F7ZFT2_ROSLO
rpsU; ribsomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=391624 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ocea
DolZOral124_scaffold_1272_12
Citreicella sp. SE45, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11739..13067
-----------------
DNA (1329bp)
protein (443aa)
Putative uncharacterized protein n=1 Tax=Citreicella sp. SE45 RepID=D0D3M9_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EEX14149.1}; TaxID=501479 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicel
hypothetical protein
DolZOral124_scaffold_1272_13
Roseivivax halodurans, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13145..14005
-----------------
DNA (861bp)
protein (287aa)
Glutathione S-transferase, N-domain n=1 Tax=Silicibacter lacuscaerulensis ITI-1157 RepID=D0CVX8_9RHOB rbh
Glutathione S-transferase {ECO:0000313|EMBL:ETX12807.1}; TaxID=1449350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax halod
yghU; GST-like protein YghU
DolZOral124_scaffold_1272_14
Leisingera sp. ANG-M1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14215..15615)
-----------------
DNA (1401bp)
protein (467aa)
Transcriptional regulator, GntR family n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LNL8_RUEPO rbh
Aspartate aminotransferase {ECO:0000313|EMBL:KIC12394.1}; TaxID=1577895 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera sp.
transcriptional regulator, GntR family rbh
DolZOral124_scaffold_1272_15
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15771..17708)
-----------------
DNA (1938bp)
protein (646aa)
ATPase AAA n=1 Tax=Ruegeria conchae RepID=UPI0002379C8C rbh
ATPase AAA {ECO:0000313|EMBL:KIC51766.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. ANG-S1.;"
hypothetical protein
DolZOral124_scaffold_1272_16
unknown

Not on your lists

comp(17705..18172)
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

DolZOral124_scaffold_1272_17
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18251..19396)
-----------------
DNA (1146bp)
protein (382aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B1X0_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ43801.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacte
hypothetical protein
DolZOral124_scaffold_1272_18
unknown

Not on your lists

comp(19393..19611)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

DolZOral124_scaffold_1272_19
Rhodobacteraceae bacterium HTCC2083, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19614..20690)
-----------------
DNA (1077bp)
protein (359aa)
Putative uncharacterized protein n=1 Tax=Rhodobacteraceae bacterium HTCC2083 RepID=B6B1X2_9RHOB rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EDZ44486.1}; TaxID=314270 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteraceae bacte
hypothetical protein
DolZOral124_scaffold_1272_20
Leisingera sp. ANG-Vp, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21134..22255
-----------------
DNA (1122bp)
protein (374aa)
gatM; glycine amidinotransferase (EC:2.1.4.1)
Glycine amidinotransferase n=1 Tax=Ruegeria sp. R11 RepID=B7QQK5_9RHOB rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:KIC18945.1}; TaxID=1577896 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Leisingera.;" source="Leisingera
DolZOral124_scaffold_1272_21
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22451..22933)
-----------------
DNA (483bp)
protein (161aa)
Cytochrome c family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4F0E8_9RHOB
Cytochrome c family protein {ECO:0000313|EMBL:EBA14599.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp
cytochrome c
DolZOral124_scaffold_1272_22
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23051..23713)
-----------------
DNA (663bp)
protein (221aa)
Octanoyltransferase {ECO:0000255|HAMAP-Rule:MF_00013}; EC=2.3.1.181 {ECO:0000255|HAMAP-Rule:MF_00013};; Lipoate-protein ligase B {ECO:0000255|HAMAP-Rule:MF_00013}; Lipoyl/octanoyl transferase {ECO:000
Octanoyltransferase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=LIPB_RUEPO rbh
lipB; lipoate-protein ligase B
DolZOral124_scaffold_1272_trna_1
unknown

Not on your lists

24033..24116
-----------------
DNA (84bp)
transferRNA
DolZOral124_scaffold_1272_23
Leisingera sp. ANG1, Leisingera, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24507..25811
-----------------
DNA (1305bp)
protein (435aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2) rbh
adenylosuccinate lyase n=1 Tax=Phaeobacter gallaeciensis RepID=UPI0002DD898D rbh
DolZOral124_scaffold_1272_24
Roseovarius mucosus, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26082..26873
-----------------
DNA (792bp)
protein (264aa)
Enoyl-CoA hydratase n=1 Tax=Roseovarius sp. TM1035 RepID=A6E2T5_9RHOB rbh
Enoyl-CoA hydratase/carnithine racemase {ECO:0000313|EMBL:KGM86839.1}; TaxID=1288298 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseovarius.;" source="R
enoyl-CoA hydratase/isomerase family protein
DolZOral124_scaffold_1272_25
Pseudooceanicola atlanticus, Pseudooceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27017..28123)
-----------------
DNA (1107bp)
protein (369aa)
histone deacetylase n=1 Tax=Oceanicola sp. S124 RepID=UPI000255A9DD rbh
Acetoin utilization protein {ECO:0000313|EMBL:KGM49177.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp.
histone deacetylase superfamily protein
DolZOral124_scaffold_1272_26
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28506..29591
-----------------
DNA (1086bp)
protein (362aa)
Twin-arginine translocation pathway signal n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JV48_9RHOB rbh
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:EBA02443.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobactera
Twin-arginine translocation pathway signal
DolZOral124_scaffold_1272_27
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29730..30770
-----------------
DNA (1041bp)
protein (347aa)
Conserved hypothetical permease protein n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JV49_9RHOB rbh
Conserved hypothetical permease protein {ECO:0000313|EMBL:EBA02444.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" source="Rhodobacteracea
permease
DolZOral124_scaffold_1272_28
Rhodobacteraceae bacterium HTCC2150, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30785..33445
-----------------
DNA (2661bp)
protein (887aa)
TRAP C4-dicarboxylate transport system permease DctM subunit n=1 Tax=Rhodobacteraceae bacterium HTCC2150 RepID=A3JV50_9RHOB rbh
TRAP C4-dicarboxylate transport system permease DctM subunit {ECO:0000313|EMBL:EBA02445.1}; TaxID=388401 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae.;" so
C4 dicarboxylatetransporter permease
DolZOral124_scaffold_1272_29
Roseobacter sp. SK209-2-6, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

33624..34712
-----------------
DNA (1089bp)
protein (363aa)
CAIB/BAIF family protein n=1 Tax=Roseobacter sp. SK209-2-6 RepID=A4EZH3_9RHOB rbh
CAIB/BAIF family protein {ECO:0000313|EMBL:EBA15141.1}; TaxID=388739 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. S
CAIB/BAIF family protein
Displaying items 1-30 of 36 in total

View Taxonomy