ggKbase home page

DolZOral124_scaffold_1283

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1283_1
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21..1208)
-----------------
DNA (1188bp)
protein (396aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbacea
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Desulfobulbus propionicus (strain ATCC 33891 / DSM 2032 / 1pr3) RepID=E8RF61_DESPD
PAS/PAC sensor signal transduction histidine kinase
DolZOral124_scaffold_1283_2
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1208..2356)
-----------------
DNA (1149bp)
protein (383aa)
Iron-containing alcohol dehydrogenase id=2268302 bin=GWB2_Desulfobacterales_56_26 species=Desulfobulbus propionicus genus=Desulfobulbus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
iron-containing alcohol dehydrogenase Tax=GWB2_Desulfobacterales_56_26_curated
iron-containing alcohol dehydrogenase
DolZOral124_scaffold_1283_3
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2662..3237
-----------------
DNA (576bp)
protein (192aa)
Uncharacterized protein n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4KT68_9DELT
Uncharacterized protein {ECO:0000313|EMBL:ESQ08533.1}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfofustis; environmental samples.;
hypothetical protein
DolZOral124_scaffold_1283_4
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3240..3833
-----------------
DNA (594bp)
protein (198aa)
Hypothetical membrane protein n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ALX4_DESPS
hypothetical protein
Hypothetical membrane protein {ECO:0000313|EMBL:CAG36651.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" source="Desulfota
DolZOral124_scaffold_1283_5
Gimesia maris, Gimesia, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3963..5546)
-----------------
DNA (1584bp)
protein (528aa)
UPF0061 protein PM8797T_16308 n=1 Tax=Planctomyces maris DSM 8797 RepID=A6C5Z3_9PLAN
UPF0061 protein PM8797T_16308 {ECO:0000256|HAMAP-Rule:MF_00692}; TaxID=344747 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Gimesia.;" source="Gimesia maris D
hypothetical protein
DolZOral124_scaffold_1283_6
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5651..7354)
-----------------
DNA (1704bp)
protein (568aa)
FAD-dependent pyridine nucleotide oxidoreductase (EC:1.3.99.1)
FAD-dependent pyridine nucleotide oxidoreductase (FPNCR family protein) n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0Q9N5_DESAH rbh
Tax=BJP_IG2157_Desulfuromonadales_56_134
DolZOral124_scaffold_1283_7
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(7347..8021)
-----------------
DNA (675bp)
protein (225aa)
Ferric reductase domain protein transmembrane component domain n=1 Tax=Thiocapsa marina 5811 RepID=F9U5F1_9GAMM
hypothetical protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
DolZOral124_scaffold_1283_8
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(8024..8236)
-----------------
DNA (213bp)
protein (71aa)
iron-sulfur binding protein n=1 Tax=Thermophagus xiamenensis RepID=UPI000255D822
iron-sulfur cluster binding protein
Iron-sulfur cluster binding protein, putative {ECO:0000313|EMBL:AAB89787.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Arc
DolZOral124_scaffold_1283_9
unknown

Not on your lists

comp(8279..8554)
-----------------
DNA (276bp)
protein (92aa)

This feature has no annotations

DolZOral124_scaffold_1283_10
unknown

Not on your lists

8560..8805
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

DolZOral124_scaffold_1283_11
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8785..11910)
-----------------
DNA (3126bp)
protein (1042aa)
gdhA5; protein GdhA5 (EC:1.4.1.2)
NADP-specific glutamate dehydrogenase GdhA {ECO:0000313|EMBL:KJS02833.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobu
GdhA3 id=1726963 bin=GWB2_Desulfobacterales_56_26 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_1283_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12120..12665)
-----------------
DNA (546bp)
protein (182aa)
porA1'; protein PorA1' (EC:1.2.7.3)
porA1'; protein PorA1' (EC:1.2.7.3); K00177 2-oxoglutarate ferredoxin oxidoreductase subunit gamma [EC:1.2.7.3] Tax=GWB2_Desulfobacterales_56_26_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y8V7_9BACT
DolZOral124_scaffold_1283_13
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12671..13471)
-----------------
DNA (801bp)
protein (267aa)
porB1; protein PorB1 (EC:1.2.7.3)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1YMV7_9BACT
2-oxoacid:ferredoxin oxidoreductase subunit beta {ECO:0000313|EMBL:KJS02804.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Des
DolZOral124_scaffold_1283_14
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13475..14623)
-----------------
DNA (1149bp)
protein (383aa)
porC1; protein PorC1 (EC:1.2.7.3); K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=GWB2_Desulfobacterales_56_26_curated
porC1; protein PorC1 (EC:1.2.7.3)
PorC1 id=1703634 bin=GWB2_Desulfobacterales_56_26 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_1283_15
Desulfobulbus sp. Tol-SR, Desulfobulbus, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14620..14841)
-----------------
DNA (222bp)
protein (74aa)
4Fe-4S cluster domain protein associated with 2-oxoglutarate synthase n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FKN4_DESAA
4Fe-4S ferredoxin {ECO:0000313|EMBL:KGO34022.1}; TaxID=1536652 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfobulbus.;" source="Desulfobulbus sp. T
4Fe-4S ferredoxin
DolZOral124_scaffold_1283_16
unknown

Not on your lists

15110..15307
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

DolZOral124_scaffold_1283_17
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15459..16649
-----------------
DNA (1191bp)
protein (397aa)
iadA; isoaspartyl dipeptidase (EC:3.4.19.5)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfoba
Isoaspartyl dipeptidase n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDI7_DESAH
DolZOral124_scaffold_1283_18
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16646..18484
-----------------
DNA (1839bp)
protein (613aa)
DppD1 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDI8_DESAH
dppD1; protein DppD1
DppD1 {ECO:0000313|EMBL:ACN15252.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophi
DolZOral124_scaffold_1283_19
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18580..20118
-----------------
DNA (1539bp)
protein (513aa)
DppA2 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDI9_DESAH
dppA2; protein DppA2
DppA2 {ECO:0000313|EMBL:ACN15253.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophi
DolZOral124_scaffold_1283_20
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20184..21107
-----------------
DNA (924bp)
protein (308aa)
DppB1 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDJ0_DESAH
dppB1; protein DppB1
DppB1 {ECO:0000313|EMBL:ACN15254.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophi
DolZOral124_scaffold_1283_21
Desulfobacterium autotrophicum, Desulfobacterium, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21109..21996
-----------------
DNA (888bp)
protein (296aa)
DppC1 n=1 Tax=Desulfobacterium autotrophicum (strain ATCC 43914 / DSM 3382 / HRM2) RepID=C0QDJ1_DESAH
dppC1; protein DppC1
DppC1 {ECO:0000313|EMBL:ACN15255.1}; TaxID=177437 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobacteraceae; Desulfobacterium.;" source="Desulfobacterium autotrophi
DolZOral124_scaffold_1283_22
Endozoicomonas elysicola, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22014..22817)
-----------------
DNA (804bp)
protein (268aa)
hypothetical protein n=1 Tax=Endozoicomonas elysicola RepID=UPI00036304DA
cof family hydrolase
Sugar phosphatase {ECO:0000313|EMBL:KEI69602.1}; TaxID=305900 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas elysicola
DolZOral124_scaffold_1283_23
Thiocystis violascens, Thiocystis, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22922..25000)
-----------------
DNA (2079bp)
protein (693aa)
PTS system D-glucose-specific IIC component, Glc family n=1 Tax=Thiocystis violascens (strain ATCC 17096 / DSM 198 / 6111) RepID=I3Y5R4_THIV6 rbh
PTS system D-glucose-specific IIC component, Glc family rbh
PTS system D-glucose-specific IIC component, Glc family {ECO:0000313|EMBL:AFL72332.1}; Flags: Precursor;; TaxID=765911 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiace
DolZOral124_scaffold_1283_24
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25178..27721)
-----------------
DNA (2544bp)
protein (848aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:CDI02908.1}; EC=2.7.3.9 {ECO:0000313|EMBL:CDI02908.1};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competiba
phosphoenolpyruvate-protein phosphotransferase n=1 Tax=Lamprocystis purpurea RepID=UPI0003785016
phosphotransferase system HPr (HPr) family protein
DolZOral124_scaffold_1283_25
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28385..30247
-----------------
DNA (1863bp)
protein (621aa)
L-lactate transport n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J6L7_DESRM
L-lactate transport
L-lactate transport {ECO:0000313|EMBL:ABO50720.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain
DolZOral124_scaffold_1283_26
Photobacterium sp. AK15, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30583..32361
-----------------
DNA (1779bp)
protein (593aa)
Sensor histidine kinase n=1 Tax=Photobacterium sp. AK15 RepID=L8JHC4_9GAMM rbh
Sensor histidine kinase {ECO:0000313|EMBL:ELR67658.1}; TaxID=1056511 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium sp. AK1
diguanylate cyclase
DolZOral124_scaffold_1283_27
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(32428..33405)
-----------------
DNA (978bp)
protein (326aa)
Aldehyde reductase {ECO:0000313|EMBL:CBH24377.1}; EC=1.1.1.21 {ECO:0000313|EMBL:CBH24377.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sa
Aldehyde reductase n=2 Tax=Salinibacter ruber RepID=D5H8M2_SALRM
aldehyde reductase
DolZOral124_scaffold_1283_28

Not on your lists

comp(33410..33898)
-----------------
DNA (489bp)
protein (163aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z9G6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD34529.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
adenylate cyclase
DolZOral124_scaffold_1283_29
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33983..34780)
-----------------
DNA (798bp)
protein (266aa)
Uncharacterized protein involved in cysteine biosynthesis n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PD57_DESSD
Cysteine biosynthesis protein {ECO:0000313|EMBL:KJS00140.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacte
uncharacterized protein involved in cysteine biosynthesis
DolZOral124_scaffold_1283_30
Desulfomonile tiedjei, Desulfomonile, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

35360..38146
-----------------
DNA (2787bp)
protein (929aa)
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C4L6_DESTA
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein
Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL-like protein {ECO:0000313|EMBL:AFM24507.1}; TaxID=706587 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales
Displaying items 1-30 of 31 in total

View Taxonomy