ggKbase home page

DolZOral124_scaffold_1316

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1316_1
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116..1072
-----------------
DNA (957bp)
protein (319aa)
Site-specific recombinase, phage integrase family protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAJ4_9RHOB rbh
Site-specific recombinase, phage integrase family protein {ECO:0000313|EMBL:EAQ14935.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritim
phage integrase family site specific recombinase
DolZOral124_scaffold_1316_2
unknown

Not on your lists

1032..1637
-----------------
DNA (606bp)
protein (202aa)

This feature has no annotations

DolZOral124_scaffold_1316_3
Oceanicola granulosus, Oceanicola, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1686..1934
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Oceanicola granulosus HTCC2516 RepID=Q2CB88_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAR49951.1}; TaxID=314256 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola granulos
DolZOral124_scaffold_1316_4
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2258..3217
-----------------
DNA (960bp)
protein (320aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAJ2_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ14933.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
DolZOral124_scaffold_1316_5
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3214..4197
-----------------
DNA (984bp)
protein (328aa)
Uncharacterized protein n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VAJ1_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:EAQ14932.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" source="Maritimibacter
bifunctional DNA primase/polymerase
DolZOral124_scaffold_1316_6
Salipiger mucosus, Salipiger, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4586..4843)
-----------------
DNA (258bp)
protein (86aa)
Uncharacterized protein n=1 Tax=Salipiger mucosus DSM 16094 RepID=S9QVA8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EPX85341.1}; TaxID=1123237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Salipiger.;" source="Salipiger mucosus D
DolZOral124_scaffold_1316_7
Citreicella sp. 357, Citreicella, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5056..5697)
-----------------
DNA (642bp)
protein (214aa)
Uncharacterized protein n=1 Tax=Citreicella sp. 357 RepID=I1ASZ1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EIE49612.1}; TaxID=766499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Citreicella.;" source="Citreicella sp. 35
DolZOral124_scaffold_1316_8
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5949..6146
-----------------
DNA (198bp)
protein (66aa)
Uncharacterized protein n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=Q5LLE3_RUEPO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV97222.1}; TaxID=246200 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria pomeroyi (st
DolZOral124_scaffold_1316_9
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6230..7402
-----------------
DNA (1173bp)
protein (391aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SCU9_9RHOB rbh
hypothetical protein
Ymg {ECO:0000313|EMBL:AAB91581.2}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens
DolZOral124_scaffold_1316_10
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7403..7903
-----------------
DNA (501bp)
protein (167aa)
Ymf n=1 Tax=Rhizobium radiobacter RepID=O52295_RHIRD
hypothetical protein
Ymf {ECO:0000313|EMBL:AAB91580.2}; TaxID=358 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens
DolZOral124_scaffold_1316_11
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7905..9866
-----------------
DNA (1962bp)
protein (654aa)
Uncharacterized protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SCU8_9RHOB rbh
Yme {ECO:0000313|EMBL:CCW16726.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium japonicum BiD32.;"
hypothetical protein rbh
DolZOral124_scaffold_1316_12
Ruegeria mobilis, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10147..11001
-----------------
DNA (855bp)
protein (285aa)
Uncharacterized protein n=1 Tax=Ruegeria mobilis F1926 RepID=R0DPY7_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:ENZ90436.1}; TaxID=1265309 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Ruegeria.;" source="Ruegeria mobilis F19
hypothetical protein
DolZOral124_scaffold_1316_13

Not on your lists

10998..11471
-----------------
DNA (474bp)
protein (158aa)
UPI0003D6BC03 related cluster n=1 Tax=unknown RepID=UPI0003D6BC03
Uncharacterized protein {ECO:0000313|EMBL:KKN57420.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Bacterial mobilization protein (MobC)
DolZOral124_scaffold_1316_14

Not on your lists

11465..12988
-----------------
DNA (1524bp)
protein (508aa)
MobA protein n=1 Tax=Thalassiobium sp. R2A62 RepID=C7DFU9_9RHOB rbh
Uncharacterized protein {ECO:0000313|EMBL:KKM04888.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
DolZOral124_scaffold_1316_15
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13326..13619
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M385_GEODF
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_1316_16
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13616..14851
-----------------
DNA (1236bp)
protein (412aa)
Putative transcription regulator with HTH domain n=1 Tax=Desulfatibacillum alkenivorans (strain AK-01) RepID=B8FMD4_DESAA rbh
transcription regulator with HTH domain
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_1316_17
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15027..15212
-----------------
DNA (186bp)
protein (62aa)
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_1316_18
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15205..15393
-----------------
DNA (189bp)
protein (63aa)
hypothetical protein n=1 Tax=Mastigocladopsis repens RepID=UPI0003091676
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_1316_19
Paracoccus sp. 5503, Paracoccus, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15456..17972)
-----------------
DNA (2517bp)
protein (839aa)
heat shock protein Hsp70 n=1 Tax=Rhizobium leguminosarum RepID=UPI000375239A rbh
Heat shock protein Hsp70 {ECO:0000313|EMBL:KGJ23522.1}; TaxID=1525717 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Paracoccus.;" source="Paracoccus sp. 55
heat shock protein
DolZOral124_scaffold_1316_20
Labrenzia aggregata, Labrenzia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17976..18350)
-----------------
DNA (375bp)
protein (125aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRW1_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAV44290.1}; TaxID=384765 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Labrenzia.;" source="Labrenzia aggregata
hypothetical protein
DolZOral124_scaffold_1316_21
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18388..19929)
-----------------
DNA (1542bp)
protein (514aa)
Uncharacterized protein n=1 Tax=Labrenzia aggregata IAM 12614 RepID=A0NRW2_9RHOB rbh
hypothetical protein
Tax=BJP_08E140C01_Roseovarius_63_250
DolZOral124_scaffold_1316_22
unknown

Not on your lists

comp(20006..20341)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

DolZOral124_scaffold_1316_23
Roseobacter sp. MED193, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20344..20766)
-----------------
DNA (423bp)
protein (141aa)
Uncharacterized protein n=1 Tax=Roseobacter sp. MED193 RepID=A3X6R4_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EAQ46487.1}; TaxID=314262 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobacter sp. ME
helix-turn-helix protein
DolZOral124_scaffold_1316_24
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20909..21115
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7F2U4_PHAIB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO92725.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter inhibe
DolZOral124_scaffold_1316_25
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21131..21367
-----------------
DNA (237bp)
protein (79aa)
Uncharacterized protein n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7DUG4_PHAIB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO92726.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter inhibe
DolZOral124_scaffold_1316_26
Phaeobacter inhibens, Phaeobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21367..22479
-----------------
DNA (1113bp)
protein (371aa)
Putative phage integrase n=1 Tax=Phaeobacter inhibens (strain ATCC 700781 / DSM 17395 / CIP 105210 / NBRC 16654 / BS107) RepID=I7F0I4_PHAIB rbh
phage integrase rbh
Putative phage integrase {ECO:0000313|EMBL:AFO92727.1}; TaxID=391619 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Phaeobacter.;" source="Phaeobacter inhib
DolZOral124_scaffold_1316_27
Litoreibacter arenae, Litoreibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22836..24026
-----------------
DNA (1191bp)
protein (397aa)
Integrase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9Q896_9RHOB
Integrase {ECO:0000313|EMBL:EPX77571.1}; TaxID=1123360 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Litoreibacter.;" source="Litoreibacter arenae DSM 1959
phage integrase, catalytic core
DolZOral124_scaffold_1316_28
unknown

Not on your lists

24186..24443
-----------------
DNA (258bp)
protein (86aa)

This feature has no annotations

DolZOral124_scaffold_1316_29
unknown

Not on your lists

24436..24873
-----------------
DNA (438bp)
protein (146aa)

This feature has no annotations

DolZOral124_scaffold_1316_30
unknown

Not on your lists

24857..25369
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

View Taxonomy