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DolZOral124_scaffold_1360

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1360_1
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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2..991
-----------------
DNA (990bp)
protein (330aa)
ABC transporter related protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R795_SPISS
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:GAF04666.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="
ABC transporter
DolZOral124_scaffold_1360_2
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1104..1550
-----------------
DNA (447bp)
protein (149aa)
ABC transporter ATP-binding protein n=1 Tax=Porphyromonas macacae RepID=UPI00035DD734
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGN78622.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" so
ABC transporter ATP-binding protein
DolZOral124_scaffold_1360_3
Tannerella sp. CAG:118, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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1699..2562
-----------------
DNA (864bp)
protein (288aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00037C8CE5
Uncharacterized protein {ECO:0000313|EMBL:CCY38456.1}; TaxID=1262978 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella; environmental samples.;" source="Tann
hypothetical protein
DolZOral124_scaffold_1360_4
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(2617..3744)
-----------------
DNA (1128bp)
protein (376aa)
response regulator receiver sensor signal transduction histidine kinase Tax=GWA2_Bacteroidetes_31_9b_curated
PAS/PAC sensor signal transduction histidine kinase id=4524499 bin=GWF2_Bacteroidetes_38_335 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
histidine kinase
DolZOral124_scaffold_1360_5
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4055..5158)
-----------------
DNA (1104bp)
protein (368aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
hypothetical protein MsalJ2_01007 id=3532842 bin=GWF2_Bacteroidetes_38_335 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
penicillin-binding protein
DolZOral124_scaffold_1360_6
RBG_13_Bacteroidetes_43_22_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(5208..6197)
-----------------
DNA (990bp)
protein (330aa)
GTPase obg; K03979 GTP-binding protein Tax=RBG_13_Bacteroidetes_43_22_curated
GTPase CgtA id=3543868 bin=GWC2_Bacteroidetes_40_13 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
GTPase CgtA
DolZOral124_scaffold_1360_7
GWA2_Bacteroidetes_31_9_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(6240..8069)
-----------------
DNA (1830bp)
protein (610aa)
DNA topoisomerase type IIA subunit B region 2 domain-containing protein; K02622 topoisomerase IV subunit B [EC:5.99.1.-] Tax=GWA2_Bacteroidetes_31_9_curated
DNA topoisomerase type IIA subunit B region 2 domain protein id=2924019 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
DNA topoisomerase type IIA subunit B region 2 domain-containing protein
DolZOral124_scaffold_1360_8
unknown

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comp(8053..8214)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

DolZOral124_scaffold_1360_9
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(8218..9051)
-----------------
DNA (834bp)
protein (278aa)
Uncharacterized protein id=3990917 bin=GWF2_Bacteroidetes_38_335 species=Ornithobacterium rhinotracheale genus=Ornithobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
DolZOral124_scaffold_1360_10
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(9413..9934)
-----------------
DNA (522bp)
protein (174aa)
Flavodoxin id=2145259 bin=GWD2_Bacteroidetes_33_33 species=unknown genus=Synechococcus taxon_order=Chroococcales taxon_class=unknown phylum=Cyanobacteria tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
flavodoxin FldA; K03839 flavodoxin I Tax=GWD2_Bacteroidetes_33_33_curated
flavodoxin FldA
DolZOral124_scaffold_1360_11
GWA2_Bacteroidetes_30_7_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(10032..10748)
-----------------
DNA (717bp)
protein (239aa)
hypothetical protein Tax=GWA2_Bacteroidetes_30_7_curated
Putative uncharacterized protein id=3747251 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein
DolZOral124_scaffold_1360_12
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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11491..13314
-----------------
DNA (1824bp)
protein (608aa)
Uncharacterized protein n=1 Tax=Flexibacter litoralis (strain ATCC 23117 / DSM 6794 / NBRC 15988 / NCIMB 1366 / Sio-4) RepID=I4AIG4_FLELS
Uncharacterized protein {ECO:0000313|EMBL:EZH75701.1}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimarina.;" source="Aquimarina atlantica.;
hypothetical protein
DolZOral124_scaffold_1360_13
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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13315..13992
-----------------
DNA (678bp)
protein (226aa)
Leucyl/phenylalanyl-tRNA--protein transferase id=4626841 bin=GWC2_Bacteroidetes_40_13 species=Desulfovibrio hydrothermalis genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Bacteroidetes_40_13 organism_group=Bacteroidetes
leucyl/phenylalanyl-tRNA--protein transferase
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_1360_14
GWE2_Bacteroidetes_40_63_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(13989..14390)
-----------------
DNA (402bp)
protein (134aa)
hypothetical protein AnHS1_01678 id=2007722 bin=GWD2_Bacteroidetes_40_43 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_40_43 organism_group=Bacteroidetes organism_desc=a63
hypothetical protein Tax=GWE2_Bacteroidetes_40_63_curated
hypothetical protein
DolZOral124_scaffold_1360_15
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14640..15119)
-----------------
DNA (480bp)
protein (160aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000371CA42
response regulator containing a CheY-like receiver domain and an HD-GYP domain
Response regulator containing a CheY-like receiver domain and an HD-GYP domain {ECO:0000313|EMBL:AJQ92391.1}; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; u
DolZOral124_scaffold_1360_16
Gynuella sunshinyii, Gynuella, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(15132..16469)
-----------------
DNA (1338bp)
protein (446aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1445510 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oc
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000367B487
signal transduction histidine kinase regulating C4-dicarboxylate transport system
DolZOral124_scaffold_1360_17
Photobacterium phosphoreum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16472..17902)
-----------------
DNA (1431bp)
protein (477aa)
hypothetical protein n=1 Tax=Flexithrix dorotheae RepID=UPI000375DFC2
Transporter, divalent anion:Na+ symporter family protein {ECO:0000313|EMBL:CEO38726.1}; TaxID=1454202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.
transporter
DolZOral124_scaffold_1360_18
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(18193..21522)
-----------------
DNA (3330bp)
protein (1110aa)
Two component regulator three Y motif family id=3881930 bin=GWF2_Bacteroidetes_33_16 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
protein serine/threonine phosphatase Tax=GWE2_Bacteroidetes_32_14_curated
Ser/Thr phosphatase
DolZOral124_scaffold_1360_19
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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22075..22533
-----------------
DNA (459bp)
protein (153aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_13_Bacteroidetes_42_15_curated
RNA polymerase, sigma-24 subunit, ECF subfamily id=2059024 bin=GWD2_Bacteroidetes_33_33 species=Mucilaginibacter paludis genus=Mucilaginibacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
ECF subfamily RNA polymerase sigma-24 subunit
DolZOral124_scaffold_1360_20
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

22536..23072
-----------------
DNA (537bp)
protein (179aa)
Putative uncharacterized protein id=2170330 bin=GWB2_Bacteroidetes_32_14 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
hypothetical protein Tax=GWD2_Bacteroidetes_33_33_curated
hypothetical protein
DolZOral124_scaffold_1360_21
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

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23189..24244
-----------------
DNA (1056bp)
protein (352aa)
hypothetical protein Tax=GWA2_Bacteroidetes_31_9b_curated
Putative uncharacterized protein id=2059029 bin=GWD2_Bacteroidetes_33_33 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
hypothetical protein
DolZOral124_scaffold_1360_22
GWE2_Bacteroidetes_32_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24257..25099)
-----------------
DNA (843bp)
protein (281aa)
Prolipoprotein diacylglyceryl transferase id=3978867 bin=GWF2_Bacteroidetes_33_16 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
prolipoprotein diacylglyceryl transferase Tax=GWE2_Bacteroidetes_32_14_curated
prolipoprotein diacylglyceryl transferase
DolZOral124_scaffold_1360_23
unknown

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25351..25539
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

DolZOral124_scaffold_1360_24
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25794..26339)
-----------------
DNA (546bp)
protein (182aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BE96_CLOBO
Cob(I)alamin adenosyltransferase {ECO:0000313|EMBL:GAO31163.1}; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Geofilum.;" source="Geofilum rubicundum J
cobinamide adenolsyltransferase
DolZOral124_scaffold_1360_25
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26559..26987
-----------------
DNA (429bp)
protein (143aa)
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAO42339.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;"
RNA polymerase ECF-type sigma factor
RNA polymerase, sigma-24 subunit, ECF subfamily id=4001139 bin=GWF2_Bacteroidetes_38_335 species=Niastella koreensis genus=Niastella taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
DolZOral124_scaffold_1360_26
CG_Bacteroid_01, Bacteroidetes, Bacteria

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27200..27367
-----------------
DNA (168bp)
protein (56aa)
4Fe-4S binding domain. Tax=CG_Bacteroid_01
ferredoxin id=1856122 bin=GWD2_Bacteroidetes_33_33 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
ferredoxin
DolZOral124_scaffold_1360_27
Sulfurimonas gotlandica, Sulfurimonas, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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27715..28590
-----------------
DNA (876bp)
protein (292aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=929558 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylob
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Sulfurimonas gotlandica GD1 RepID=B6BKG0_9HELI
DolZOral124_scaffold_1360_28
CG_CP01_01, CG_CP01, Bacteria

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28606..29157
-----------------
DNA (552bp)
protein (184aa)
dTDP-4-dehydrorhamnose 3,5-epimerase; K01790 dTDP-4-dehydrorhamnose 3,5-epimerase [EC:5.1.3.13] Tax=CG_CP01_01
rfbC_1; dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248EC16
DolZOral124_scaffold_1360_29
Francisella philomiragia, Francisella, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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29166..30038
-----------------
DNA (873bp)
protein (291aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KFJ42682.1}; EC=1.1.1.133 {ECO:0000313|EMBL:KFJ42682.1};; TaxID=28110 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Francise
rfbD; dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
dTDP-4-dehydrorhamnose reductase n=1 Tax=Nitratifractor salsuginis (strain DSM 16511 / JCM 12458 / E9I37-1) RepID=E6WZL7_NITSE
DolZOral124_scaffold_1360_30
Nitratifractor salsuginis, Nitratifractor, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

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30077..31102
-----------------
DNA (1026bp)
protein (342aa)
dtdp-glucose 4,6-dehydratase (EC:4.2.1.46)
dTDP-glucose 4,6-dehydratase {ECO:0000256|RuleBase:RU004473}; EC=4.2.1.46 {ECO:0000256|RuleBase:RU004473};; TaxID=749222 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Ni
dTDP-glucose 4,6-dehydratase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A6483
Displaying items 1-30 of 38 in total

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