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DolZOral124_scaffold_1372

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1372_1
Bacteroidales bacterium CF, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(75..1259)
-----------------
DNA (1185bp)
protein (395aa)
Type I restriction-modification system, DNA-methyltransferase subunit M {ECO:0000313|EMBL:AGY53011.1}; EC=2.1.1.72 {ECO:0000313|EMBL:AGY53011.1};; TaxID=1400053 species="Bacteria; Bacteroidetes; Bacte
Type I restriction-modification system, DNA-methyltransferase subunit M n=1 Tax=Bacteroidales bacterium CF RepID=U5Q3E5_9BACT
type I restriction endonuclease subunit M
DolZOral124_scaffold_1372_2
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

1500..2255
-----------------
DNA (756bp)
protein (252aa)
Multiple sugar transport system permease protein id=3704951 bin=GWF2_Ignavibacteria_33_9 species=uncultured Chlorobi bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chlorobi tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
binding-protein-dependent transport systems inner membrane component; K02026 multiple sugar transport system permease protein Tax=GWF2_RIF_IGX_33_9_curated
binding-protein-dependent transport systems inner membrane component
DolZOral124_scaffold_1372_3
Sporocytophaga myxococcoides, Sporocytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2279..3778)
-----------------
DNA (1500bp)
protein (500aa)
Uncharacterized protein n=1 Tax=Helicobacter cetorum (strain ATCC BAA-429 / MIT 00-7128) RepID=I0EPV8_HELC0
Uncharacterized protein {ECO:0000313|EMBL:GAL87176.1}; TaxID=153721 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Sporocytophaga.;" source="Sporocytophaga myxococcoides.;"
hypothetical protein
DolZOral124_scaffold_1372_4
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

3928..4995
-----------------
DNA (1068bp)
protein (356aa)
id=4164175 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
id=4164175 Tax=GWF2_RIF_IGX_33_9_curated
DolZOral124_scaffold_1372_5
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

4999..5586
-----------------
DNA (588bp)
protein (196aa)
RNA polymerase sigma factor id=4759471 bin=GWA2_Ignavibacteria-rel_35_8 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
RNA polymerase, sigma-24 subunit, ECF subfamily
DolZOral124_scaffold_1372_6
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

5615..6904
-----------------
DNA (1290bp)
protein (430aa)
id=4164173 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
id=4164173 Tax=GWF2_RIF_IGX_33_9_curated
DolZOral124_scaffold_1372_7
unknown

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comp(7234..7686)
-----------------
DNA (453bp)
protein (151aa)

This feature has no annotations

DolZOral124_scaffold_1372_8
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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comp(7896..8219)
-----------------
DNA (324bp)
protein (108aa)
Thioredoxin n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MCX6_RHOM4
thioredoxin
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" source="Rhodothermus marinus (strai
DolZOral124_scaffold_1372_9
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

8308..9339
-----------------
DNA (1032bp)
protein (344aa)
TrkA-N domain protein id=2961552 bin=GWC2_Methylomirabilis_70_16 species=Oceanithermus profundus genus=Oceanithermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
trka-n domain protein Tax=GWC2_Rokubacteria_70_16_curated
trka-n domain protein
DolZOral124_scaffold_1372_10
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists

comp(9437..10381)
-----------------
DNA (945bp)
protein (315aa)
Electron transfer flavoprotein subunit alpha id=3257825 bin=GWF2_Ignavibacteria_33_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
electron transfer flavoprotein subunit alpha; K03522 electron transfer flavoprotein alpha subunit Tax=GWF2_RIF_IGX_33_9_curated
electron transfer flavoprotein subunit alpha
DolZOral124_scaffold_1372_11
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(10400..11131)
-----------------
DNA (732bp)
protein (244aa)
Electron transfer flavoprotein subunit beta id=4653711 bin=GWA2_Ignavibacteria-rel_35_8 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
electron transfer flavoprotein subunit beta Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
electron transfer flavoprotein subunit alpha/beta
DolZOral124_scaffold_1372_12
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists


comp(11244..11570)
-----------------
DNA (327bp)
protein (109aa)
30S ribosomal protein S18 id=2012366 bin=GWB2_Ignavibacteria_35_12 species=unknown genus=unknown taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
30S ribosomal protein S18
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_13
GWF2_RIF_IGX_33_9_curated, RIF-IGX, Bacteria

Not on your lists


comp(11570..11803)
-----------------
DNA (234bp)
protein (78aa)
50S ribosomal protein L31 id=4197860 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=Gluconacetobacter taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
rpmE2; 50S ribosomal protein L31; K02909 large subunit ribosomal protein L31 Tax=GWF2_RIF_IGX_33_9_curated
50S ribosomal protein L31
DolZOral124_scaffold_1372_14
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(11812..11982)
-----------------
DNA (171bp)
protein (57aa)
id=4197859 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_15
unknown

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12343..12810
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

DolZOral124_scaffold_1372_16
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

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comp(12903..14294)
-----------------
DNA (1392bp)
protein (464aa)
hypothetical protein id=3907410 bin=GWA2_Ignavibacteria-rel_35_8 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria rbh
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_17
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(14310..15302)
-----------------
DNA (993bp)
protein (331aa)
PfkB domain protein id=1903589 bin=GWB2_Ignavibacteria_35_12 species=Planctomyces limnophilus genus=Planctomyces taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
PfkB domain-containing protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
sugar kinase
DolZOral124_scaffold_1372_18
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(15313..16353)
-----------------
DNA (1041bp)
protein (347aa)
D-alanine--D-alanine ligase id=2580348 bin=GWF2_Ignavibacteria_33_9 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria rbh
D-alanine--D-alanine ligase
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_19
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(16385..17191)
-----------------
DNA (807bp)
protein (269aa)
Bacteriophage-type DNA polymerase id=1903591 bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
Bacteriophage-type DNA polymerase
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_20
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(17292..18752)
-----------------
DNA (1461bp)
protein (487aa)
Glycosyltransferase id=1747702 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good rbh
glycosyltransferase
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_21
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

comp(18827..19333)
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein id=1747648 bin=GWB2_Ignavibacteria_35_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
hypothetical protein Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
hypothetical protein
DolZOral124_scaffold_1372_22
Thermoanaerobacter kivui, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19330..19971)
-----------------
DNA (642bp)
protein (214aa)
Hydroxyacylglutathione hydrolase n=1 Tax=Thermincola potens (strain JR) RepID=D5XEK1_THEPJ
beta-lactamase domain-containing protein
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:AIS52320.1}; TaxID=2325 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" sou
DolZOral124_scaffold_1372_23
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(19979..20716)
-----------------
DNA (738bp)
protein (246aa)
Short-chain dehydrogenase/reductase SDR id=1959361 bin=GWA2_Ignavibacteria-rel_35_8 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
short chain dehydrogenase
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_24
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(20906..24037)
-----------------
DNA (3132bp)
protein (1044aa)
Cation/multidrug efflux pump n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG22_IGNAJ
cation/multidrug efflux pump
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_25
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(24068..25111)
-----------------
DNA (1044bp)
protein (348aa)
Membrane-fusion protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG23_IGNAJ
membrane-fusion protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_26
BJP_IG2102_Ignavibacteriales_35_8, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

comp(25162..26604)
-----------------
DNA (1443bp)
protein (481aa)
OMF family outer membrane protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AG24_IGNAJ rbh
OMF family outer membrane protein
Tax=BJP_IG2102_Ignavibacteriales_35_8
DolZOral124_scaffold_1372_27
Echinicola vietnamensis, Echinicola, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(26636..27268)
-----------------
DNA (633bp)
protein (211aa)
Transcriptional regulator n=1 Tax=Echinicola vietnamensis (strain DSM 17526 / LMG 23754 / KMM 6221) RepID=L0G582_ECHVK
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:AGA80166.1}; TaxID=926556 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Echinicola.;" source="Echinicola vietnamensis (stra
DolZOral124_scaffold_1372_28
RIFOXYC2_FULL_RIF_IGX_35_21_curated, RIF-IGX, Bacteria

Not on your lists

27493..28410
-----------------
DNA (918bp)
protein (306aa)
glk; glucokinase; K00845 glucokinase [EC:2.7.1.2] Tax=RIFOXYC2_FULL_RIF_IGX_35_21_curated
Glucokinase id=2080986 bin=GWB2_Ignavibacteria_35_12 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
glucokinase
DolZOral124_scaffold_1372_29
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(28482..32306)
-----------------
DNA (3825bp)
protein (1275aa)
Putative uncharacterized protein id=2731401 bin=GWC2_Ignavibacteria_56_12 species=Haliscomenobacter hydrossis genus=Haliscomenobacter taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
hypothetical protein
Tax=BJP_IG2069_Ignavibacteriae_38_11
DolZOral124_scaffold_1372_30
BJP_IG2069_Ignavibacteriae_38_11, Ignavibacteriae, Bacteria

Not on your lists

comp(32323..35430)
-----------------
DNA (3108bp)
protein (1036aa)
IPT/TIG domain protein n=1 Tax=Microscilla marina ATCC 23134 RepID=A1ZHJ5_9BACT
glycosyl hydrolase
Tax=BJP_IG2069_Ignavibacteriae_38_11
Displaying items 1-30 of 31 in total

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