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DolZOral124_scaffold_1419

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1419_1

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comp(1..99)
-----------------
DNA (99bp)
protein (33aa)
Elongation factor Tu n=1 Tax=Spiribacter salinus M19-40 RepID=R4VHD1_9GAMM
Translation elongation factor Tu
Translation elongation factor Tu {ECO:0000313|EMBL:EQD31711.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.
DolZOral124_scaffold_1419_trna_3
unknown

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comp(188..259)
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_1419_trna_2
unknown

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comp(280..351)
-----------------
DNA (72bp)
transferRNA
DolZOral124_scaffold_1419_trna_1
unknown

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comp(431..511)
-----------------
DNA (81bp)
transferRNA
DolZOral124_scaffold_1419_2
GWF2_Gammaproteobacteria_41_13_curated, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(570..1397)
-----------------
DNA (828bp)
protein (276aa)
bis(5'nucleosyl)-tetraphosphatase ApaH (EC:3.6.1.41); K01525 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) [EC:3.6.1.41] Tax=GWF2_Gammaproteobacteria_41_13_curated
bis(5'nucleosyl)-tetraphosphatase ApaH (EC:3.6.1.41)
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RVQ8_ALLVD
DolZOral124_scaffold_1419_3
Endozoicomonas montiporae, Endozoicomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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1543..2352
-----------------
DNA (810bp)
protein (270aa)
aldo/keto reductase n=1 Tax=Pseudomonas pelagia RepID=UPI0003A74DF3 rbh
Aldo/keto reductase {ECO:0000313|EMBL:KEQ13246.1}; TaxID=1027273 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Hahellaceae; Endozoicomonas.;" source="Endozoicomonas montip
aldo/keto reductase
DolZOral124_scaffold_1419_4
R_Gammaproteobacteria_35_23, Gammaproteobacteria, Proteobacteria, Bacteria

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2349..3590
-----------------
DNA (1242bp)
protein (414aa)
kdt30A; KDO transferase kdt30A (EC:2.-.-.-); K02527 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.4.99.12 2.4.99.13 2.4.99.14 2.4.99.15] Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_35_23_curated
3-deoxy-D-manno-octulosonic acid transferase n=1 Tax=Pseudomonas stutzeri MF28 RepID=U3HPJ8_PSEST
3-deoxy-D-manno-octulosonic acid transferase
DolZOral124_scaffold_1419_5
Pasteurella dagmatis, Pasteurella, Pasteurellales, Gammaproteobacteria, Proteobacteria, Bacteria

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3592..4410
-----------------
DNA (819bp)
protein (273aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:EEX49475.1}; EC=2.4.-.- {ECO:0000313|EMBL:EEX49475.1};; TaxID=667128 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellale
Glycosyltransferase, group 2 family protein n=1 Tax=Pasteurella dagmatis ATCC 43325 RepID=C9PSP4_9PAST
glycosyltransferase
DolZOral124_scaffold_1419_6
RLO_Gammaproteobacteria_47_11, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4488..5459)
-----------------
DNA (972bp)
protein (324aa)
3-oxoacyl-ACP synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180] Tax=RifCSPlowO2_12_Gammaproteobacteria_47_11_curated
3-oxoacyl-ACP synthase n=1 Tax=Thiomicrospira arctica RepID=UPI0003740A52
fabH; 3-oxoacyl-ACP synthase
DolZOral124_scaffold_1419_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5469..6536)
-----------------
DNA (1068bp)
protein (356aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase
Phosphate acyltransferase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BZZ7_9GAMM
phosphate:acyl-ACP acyltransferase PlsX
DolZOral124_scaffold_1419_8
gamma proteobacterium HdN1, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6659..6856)
-----------------
DNA (198bp)
protein (66aa)
50S ribosomal protein L32 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VQ18_9GAMM
rpmF; 50S ribosomal protein L32
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=83406 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium HdN1.;"
DolZOral124_scaffold_1419_9
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6896..7387)
-----------------
DNA (492bp)
protein (164aa)
hypothetical protein n=1 Tax=Amphritea japonica RepID=UPI000360859C
Uncharacterized protein {ECO:0000313|EMBL:KGD61356.1}; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jad
metal-binding, possibly nucleic acid-binding protein
DolZOral124_scaffold_1419_10
BJP_IG2102_Gammaproteobacteria_62_140, Gammaproteobacteria, Proteobacteria, Bacteria

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7699..8766
-----------------
DNA (1068bp)
protein (356aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Thioalkalimicrobium aerophilum AL3 RepID=G4DAF6_9GAMM
Tax=BJP_IG2102_Gammaproteobacteria_62_140
DolZOral124_scaffold_1419_11
Snodgrassella alvi, Snodgrassella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8841..9728)
-----------------
DNA (888bp)
protein (296aa)
tRNA 2-thiocytidine biosynthesis protein TtcA n=1 Tax=Algicola sagamiensis RepID=UPI000364A7F0
tRNA(Cytosine32)-2-thiocytidine synthetase
tRNA 2-thiocytidine biosynthesis protein TtcA {ECO:0000256|HAMAP-Rule:MF_01850}; TaxID=1196094 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Snodgrassella.;" sour
DolZOral124_scaffold_1419_12
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9833..10324
-----------------
DNA (492bp)
protein (164aa)
Invasion associated locus B family protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DIU8_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF00042.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
DolZOral124_scaffold_1419_13
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

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10597..11280
-----------------
DNA (684bp)
protein (228aa)
hypothetical protein n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI0002D6AE30
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ03054.1}; Flags: Precursor;; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
DolZOral124_scaffold_1419_14
Kordia algicida, Kordia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11390..12466)
-----------------
DNA (1077bp)
protein (359aa)
FAD dependent oxidoreductase (EC:1.-.-.-)
Glycine/D-amino acid oxidase (Deaminating) n=1 Tax=Kordia algicida OT-1 RepID=A9DPP4_9FLAO
Glycine/D-amino acid oxidase (Deaminating) {ECO:0000313|EMBL:EDP97485.1}; TaxID=391587 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Kordia.;" source="Kordia a
DolZOral124_scaffold_1419_15
Basilea psittacipulmonis, Basilea, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12598..13695)
-----------------
DNA (1098bp)
protein (366aa)
Zn-dependent alcohol dehydrogenase n=1 Tax=Ralstonia sp. PBA RepID=I9KW04_9RALS rbh
alcohol dehydrogenase
Alcohol dehydrogenase {ECO:0000313|EMBL:AIL32513.1}; TaxID=1072685 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Basilea.;" source="Basilea psittacipulmonis D
DolZOral124_scaffold_1419_16
Saccharophagus degradans, Saccharophagus, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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13930..14955
-----------------
DNA (1026bp)
protein (342aa)
hex3C; beta-N-acetylhexosaminidase. Glycosyl Hydrolase family 3. (EC:3.2.1.52)
Beta-hexosaminidase {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00015774}; EC=3.2.1.52 {ECO:0000256|HAMAP-Rule:MF_00364, ECO:0000256|SAAS:SAAS00114579};; Beta-N-acetylhexosaminidase {ECO:00
Beta-hexosaminidase n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q7PC47_SACD2
DolZOral124_scaffold_1419_17
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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15008..15373
-----------------
DNA (366bp)
protein (122aa)
Ribosomal protein L33 family protein n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZI57_9GAMM
Ribosomal protein L33 family protein {ECO:0000313|EMBL:EHM52216.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" sourc
hypothetical protein
DolZOral124_scaffold_1419_18
Psychrobacter sp. PRwf-1, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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15466..16035
-----------------
DNA (570bp)
protein (190aa)
Phosphoribosyltransferase n=1 Tax=Psychrobacter sp. (strain PRwf-1) RepID=A5WER8_PSYWF
hypoxanthine-guanine phosphoribosyltransferase
Phosphoribosyltransferase {ECO:0000313|EMBL:ABQ94159.1}; TaxID=349106 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" source="Psychrobacter sp.
DolZOral124_scaffold_1419_19
Erwinia typographi, Erwinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16273..19566)
-----------------
DNA (3294bp)
protein (1098aa)
cell division protein FtsK n=1 Tax=Vibrio tasmaniensis RepID=UPI00031F6ACD rbh
Cell division protein FtsK {ECO:0000313|EMBL:KGT94166.1}; TaxID=371042 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Erwinia.;" source="Erwinia typogra
DNA translocase FtsK
DolZOral124_scaffold_1419_20
Dichelobacter nodosus, Dichelobacter, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20256..20969
-----------------
DNA (714bp)
protein (238aa)
tRNA (cmo5U34)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_01589}; EC=2.1.1.- {ECO:0000255|HAMAP-Rule:MF_01589};; TaxID=246195 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriale
tRNA (cmo5U34)-methyltransferase n=1 Tax=Dichelobacter nodosus (strain VCS1703A) RepID=CMOA_DICNV
methyltransferase family protein
DolZOral124_scaffold_1419_21
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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21001..22023
-----------------
DNA (1023bp)
protein (341aa)
tRNA (mo5U34)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194472}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_01590, ECO:0000256|SAAS:SAAS00194476};; TaxID=294 species="Bacte
tRNA (mo5U34)-methyltransferase n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=CMOB_PSEFS
hypothetical protein
DolZOral124_scaffold_1419_22
unknown

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22317..22880
-----------------
DNA (564bp)
protein (188aa)

This feature has no annotations

DolZOral124_scaffold_1419_23
Ectothiorhodospira sp. PHS-1, Ectothiorhodospira, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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22865..25048
-----------------
DNA (2184bp)
protein (728aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=519989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiracea
histidine kinase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI00036A7890
integral membrane sensor signal transduction histidine kinase
DolZOral124_scaffold_1419_24
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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25029..26378
-----------------
DNA (1350bp)
protein (450aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI0003695491
Two component, sigma54 specific,transcriptional regulator, Fis family {ECO:0000313|EMBL:CDI00932.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatu
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
DolZOral124_scaffold_1419_25
unknown

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26395..26598
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

DolZOral124_scaffold_1419_26
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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26820..27983
-----------------
DNA (1164bp)
protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5) rbh
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZJK5_9GAMM
DolZOral124_scaffold_1419_27
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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27999..28871
-----------------
DNA (873bp)
protein (291aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardi
sucD; succinyl-CoA synthetase, alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZJK6_9GAMM
Displaying items 1-30 of 40 in total

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