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DolZOral124_scaffold_1448

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1448_1
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..477)
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium thermocellum JW20 RepID=D1NMR1_CLOTM
prepilin-type cleavage/methylation
Uncharacterized protein {ECO:0000313|EMBL:ABN52336.1}; Flags: Precursor;; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi
DolZOral124_scaffold_1448_2
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(585..2141)
-----------------
DNA (1557bp)
protein (519aa)
yfmM; putative efflux ABC transporter ATP-binding protein (EC:3.6.3.-)
Putative efflux ABC transporter ATP-binding protein n=1 Tax=Bacillus azotoformans LMG 9581 RepID=K6E1Q8_BACAZ rbh
Putative efflux ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKN67106.1}; TaxID=1131731 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoform
DolZOral124_scaffold_1448_3
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2152..3501)
-----------------
DNA (1350bp)
protein (450aa)
Glucose-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|RuleBase:RU000612}; Short=GPI {ECO:0000256|HAMAP-Rule:MF_00473};; EC=5.3.1.9 {ECO:0000256|HAMAP-Rule:MF_00473, ECO:0000256|R
glucose-6-phosphate isomerase (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CNM5_9CLOT
DolZOral124_scaffold_1448_4
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3516..4472)
-----------------
DNA (957bp)
protein (319aa)
Glucokinase {ECO:0000313|EMBL:CDF57215.1}; EC=2.7.1.2 {ECO:0000313|EMBL:CDF57215.1};; TaxID=941824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Thermobrachium.;" source="T
Glucokinase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RPQ7_9CLOT rbh
ROK family glucokinase
DolZOral124_scaffold_1448_5
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4699..7767)
-----------------
DNA (3069bp)
protein (1023aa)
Putative RND efflux transporter n=1 Tax=Clostridium botulinum C str. Eklund RepID=B1BAU9_CLOBO rbh
Nodulation protein NolG {ECO:0000313|EMBL:KDR95784.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] litorale
RND efflux transporter
DolZOral124_scaffold_1448_6
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7779..8873)
-----------------
DNA (1095bp)
protein (365aa)
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:KDR95785.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Cl
Efflux transporter, RND family, MFP subunit id=2063561 bin=GWB2_Clostridiales_37_7 species=Clostridium carboxidivorans genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
RND family efflux transporter MFP subunit
DolZOral124_scaffold_1448_7
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8892..9473)
-----------------
DNA (582bp)
protein (194aa)
Transcriptional regulator, TetR family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK73_ALKMQ
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABR46591.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metall
DolZOral124_scaffold_1448_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9910..10518
-----------------
DNA (609bp)
protein (203aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCW9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOD00140.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
DolZOral124_scaffold_1448_9
Clostridium tetani, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10534..10950
-----------------
DNA (417bp)
protein (139aa)
Flavodoxin n=1 Tax=Clostridium tetani (strain Massachusetts / E88) RepID=Q898L5_CLOTE
flavodoxin
Flavodoxin {ECO:0000313|EMBL:AAO35064.1}; TaxID=212717 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetani (strain Massachusetts / E88).
DolZOral124_scaffold_1448_10
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10995..14045)
-----------------
DNA (3051bp)
protein (1017aa)
Uncharacterized protein n=1 Tax=Acetobacterium woodii (strain ATCC 29683 / DSM 1030 / JCM 2381 / KCTC 1655) RepID=H6LF92_ACEWD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFA48192.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Acetobacterium woodii (strain AT
DolZOral124_scaffold_1448_11
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14062..14892)
-----------------
DNA (831bp)
protein (277aa)
RNA-binding protein n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D8B3 rbh
RNA-binding protein {ECO:0000313|EMBL:KJF26678.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
RNA-binding S1 domain-containing protein
DolZOral124_scaffold_1448_12
Bacillus badius, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(14908..15855)
-----------------
DNA (948bp)
protein (316aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=1455 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae
succinyl-CoA ligase subunit alpha (EC:6.2.1.5)
succinyl-CoA synthetase subsunit alpha n=1 Tax=Staphylococcus delphini RepID=UPI0002E3E0B7 rbh
DolZOral124_scaffold_1448_13
Bacillus sp. B-jedd, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15868..17028)
-----------------
DNA (1161bp)
protein (387aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=3 Tax=Bacillus megaterium RepID=G2RJF9_BACME rbh
sucC; succinyl-CoA synthetase subunit beta
DolZOral124_scaffold_1448_14
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17132..18214)
-----------------
DNA (1083bp)
protein (361aa)
Uncharacterized protein n=2 Tax=Gardnerella vaginalis RepID=I4LK85_GARVA
Uncharacterized protein {ECO:0000313|EMBL:KGF12184.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptostreptococcus s
DNA-binding protein
DolZOral124_scaffold_1448_15
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(18399..20555)
-----------------
DNA (2157bp)
protein (719aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=GWB2_Clostridiales_37_7_curated
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI00035F6725 rbh
copper-translocating P-type ATPase
DolZOral124_scaffold_1448_16
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20669..21052)
-----------------
DNA (384bp)
protein (128aa)
GtrA family protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TK20_ALKMQ
Uncharacterized protein {ECO:0000313|EMBL:KJF25743.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
GtrA family protein
DolZOral124_scaffold_1448_17
Lysinibacillus massiliensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(21084..22634)
-----------------
DNA (1551bp)
protein (517aa)
Uncharacterized protein n=1 Tax=Clostridium sp. KLE 1755 RepID=U2AY61_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGR90284.1}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus.;" source="Lysinibacillus massiliensis 4400831 = CI
DolZOral124_scaffold_1448_18
Methanobacterium sp. Maddingley MBC34, Methanobacterium, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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comp(22650..23591)
-----------------
DNA (942bp)
protein (314aa)
Glycosyl transferase n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TWL9_9EURY
Glycosyl transferase {ECO:0000313|EMBL:EKQ51397.1}; TaxID=1220534 species="Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales; Methanobacteriaceae; Methanobacterium.;" source="Methanobacteriu
Glycosyltransferases involved in cell wall biogenesis
DolZOral124_scaffold_1448_19
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23694..24431)
-----------------
DNA (738bp)
protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridylate synthase A (EC:5.4.99.12)
tRNA pseudouridine synthase A n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RU36_9CLOT
DolZOral124_scaffold_1448_20
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24474..25271)
-----------------
DNA (798bp)
protein (266aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AV36_9CLOT rbh
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=84022 species="Bacteri
cobalt transport protein
DolZOral124_scaffold_1448_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25265..26125)
-----------------
DNA (861bp)
protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Cobalt transporter ATP-binding subunit n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AWM8_9CLOT rbh
cobalt ABC transporter, ATP-binding protein
DolZOral124_scaffold_1448_22
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26110..26958)
-----------------
DNA (849bp)
protein (283aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
ATPase component of general energizing module of ECF transporters n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RTW9_9CLOT rbh
ybxA; YbxA
DolZOral124_scaffold_1448_23
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27086..29305)
-----------------
DNA (2220bp)
protein (740aa)
S-layer domain-containing protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VGU8_CLOSH rbh
SLH domain-containing protein
S-layer domain-containing protein {ECO:0000313|EMBL:AGC67185.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium sterc
DolZOral124_scaffold_1448_24
GWC2_Clostridiales_40_7_curated, Clostridiales, Bacteria

Not on your lists

comp(29413..29880)
-----------------
DNA (468bp)
protein (156aa)
Small multi-drug export protein id=3789728 bin=GWC2_Clostridiales_40_7 species=unknown genus=Thermoanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
putative small multi-drug export Tax=GWC2_Clostridiales_40_7_curated
putative small multi-drug export
DolZOral124_scaffold_1448_25
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29906..31594)
-----------------
DNA (1689bp)
protein (563aa)
Phosphomannomutase {ECO:0000313|EMBL:EOC99299.1}; EC=5.4.2.8 {ECO:0000313|EMBL:EOC99299.1};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;
Phosphomannomutase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CAE7_9CLOT
phosphomannomutase
DolZOral124_scaffold_1448_26
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31723..32931)
-----------------
DNA (1209bp)
protein (403aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:M
pepT; peptidase T (EC:3.4.11.4)
peptidase T n=1 Tax=Fusobacterium russii RepID=UPI00039FE013 rbh
DolZOral124_scaffold_1448_27
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33012..34541)
-----------------
DNA (1530bp)
protein (510aa)
hypothetical protein n=1 Tax=Anaerococcus sp. PH9 RepID=UPI0002DAF76C
C4-dicarboxylate anaerobic carrier {ECO:0000313|EMBL:EGC84432.1}; TaxID=879306 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus hydrogen
C4-dicarboxylate anaerobic carrier
DolZOral124_scaffold_1448_28
Cryptobacterium curtum, Cryptobacterium, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(34672..35481)
-----------------
DNA (810bp)
protein (270aa)
DNA/RNA non-specific endonuclease n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MNM2_CRYCD
DNA/RNA non-specific endonuclease
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:ACU94512.1}; TaxID=469378 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Cryptobacterium.;" source="Cryptobacte
DolZOral124_scaffold_1448_29
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35497..35721)
-----------------
DNA (225bp)
protein (75aa)
PKD domain containing protein n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D711_9FIRM
PKD domain containing protein {ECO:0000313|EMBL:EGY76310.1}; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus indolicus A
Protein of unknown function (DUF1653).
Displaying 29 items

View Taxonomy