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DolZOral124_scaffold_1494

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1494_1
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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comp(3..692)
-----------------
DNA (690bp)
protein (230aa)
sulfide dehydrogenase (flavoprotein) subunit SudB (EC:1.8.1.-)
Ferredoxin--NADP+ reductase subunit alpha n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GP05_9FIRM
Ferredoxin--NADP+ reductase subunit alpha {ECO:0000313|EMBL:CDE28825.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; enviro
DolZOral124_scaffold_1494_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(913..2094)
-----------------
DNA (1182bp)
protein (394aa)
GTP-binding protein n=1 Tax=Clostridium novyi (strain NT) RepID=A0PYW5_CLONN
ATP-binding protein {ECO:0000313|EMBL:KEH93952.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1.;"
GTP-binding protein
DolZOral124_scaffold_1494_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2091..3479)
-----------------
DNA (1389bp)
protein (463aa)
Iron-only hydrogenase maturation rSAM protein HydG n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2CZA1_9FIRM
thiH; thiamine biosynthesis protein ThiH rbh
Iron-only hydrogenase maturation rSAM protein HydG {ECO:0000313|EMBL:ERI89885.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 8
DolZOral124_scaffold_1494_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3472..4473)
-----------------
DNA (1002bp)
protein (334aa)
bioB; biotin synthase (EC:2.8.1.6)
[FeFe] hydrogenase H-cluster radical SAM maturase HydE n=7 Tax=Clostridium difficile RepID=T3P3V3_CLODI
[FeFe] hydrogenase H-cluster radical SAM maturase HydE {ECO:0000313|EMBL:KIE46453.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
DolZOral124_scaffold_1494_5
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4496..6259)
-----------------
DNA (1764bp)
protein (588aa)
hydrogenase, Fe-only (EC:1.12.7.2)
hydrogenase, Fe-only id=1780227 bin=GWE2_Bacteroidetes_42_24 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_24 organism_group=Bacteroidetes
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1494_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6270..8198)
-----------------
DNA (1929bp)
protein (643aa)
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein (EC:1.6.99.5)
NAD(P)-dependent iron-only hydrogenase diaphorase component flavoprotein n=1 Tax=Ilyobacter polytropus (strain DSM 2926 / CuHBu1) RepID=E3H6P5_ILYPC
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1494_7
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8208..8684)
-----------------
DNA (477bp)
protein (159aa)
NADH dehydrogenase (ubiquinone) 24 kDa subunit
NADH dehydrogenase (ubiquinone) 24 kDa subunit id=4533601 bin=GWF2_Bacteroidetes_43_11 species=unknown genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_43_11 organism_group=Bacteroidetes
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1494_8
unknown

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comp(8939..9067)
-----------------
DNA (129bp)
protein (43aa)

This feature has no annotations

DolZOral124_scaffold_1494_9
Dehalobacter sp. CF, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9064..10185)
-----------------
DNA (1122bp)
protein (374aa)
diguanylate cyclase n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002EAA10D
diguanylate cyclase with PAS/PAC sensor
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:AFV05465.1}; TaxID=1131462 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp.
DolZOral124_scaffold_1494_10
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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10372..11412
-----------------
DNA (1041bp)
protein (347aa)
hypothetical protein id=1905237 bin=GWB2_Clostridiales_37_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
DolZOral124_scaffold_1494_11
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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11396..12178
-----------------
DNA (783bp)
protein (261aa)
hypothetical protein id=1905242 bin=GWB2_Clostridiales_37_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
DolZOral124_scaffold_1494_12
Peptostreptococcaceae bacterium ACC19a, Clostridiales, Clostridia, Firmicutes, Bacteria

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12278..14392
-----------------
DNA (2115bp)
protein (705aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium ACC19a RepID=G9WZM2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL15909.1}; TaxID=796937 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium ACC19a.;"
mcpA1; methyl-accepting chemotaxis protein McpA
DolZOral124_scaffold_1494_13
Roseburia sp. CAG:45, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14726..16189)
-----------------
DNA (1464bp)
protein (488aa)
Glutamate--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00022}; EC=6.1.1.17 {ECO:0000256|HAMAP-Rule:MF_00022};; Glutamyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00022}; TaxID=1262947 species="Bacteria; F
glutamyl-tRNA synthetase, bacterial family (EC:6.1.1.17)
Glutamate--tRNA ligase n=1 Tax=Roseburia sp. CAG:45 RepID=R6PW90_9FIRM
DolZOral124_scaffold_1494_14
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16221..17573)
-----------------
DNA (1353bp)
protein (451aa)
GTPase Der n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HRK3_9FIRM
GTPase Der {ECO:0000256|HAMAP-Rule:MF_00195, ECO:0000256|RuleBase:RU004481}; GTP-binding protein EngA {ECO:0000256|HAMAP-Rule:MF_00195}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostr
engA; GTP-binding protein EngA
DolZOral124_scaffold_1494_15
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(17659..19788)
-----------------
DNA (2130bp)
protein (710aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=U6Q1X8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ44341.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
S-layer domain-containing protein
DolZOral124_scaffold_1494_16
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(19903..21432)
-----------------
DNA (1530bp)
protein (510aa)
S-layer domain-containing protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VSU1_CLOSH
xylan-binding protein
S-layer domain-containing protein {ECO:0000313|EMBL:AGC69451.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium sterc
DolZOral124_scaffold_1494_17
Eubacterium sp. CAG:603, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21510..21779)
-----------------
DNA (270bp)
protein (90aa)
Flagellar biosynthesis protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P5Q7_9FIRM
Flagellar biosynthesis protein {ECO:0000313|EMBL:CCZ04397.1}; TaxID=1262891 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Euba
flagellar protein FhlB-like protein
DolZOral124_scaffold_1494_18
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(21931..23547)
-----------------
DNA (1617bp)
protein (539aa)
Uncharacterized protein n=1 Tax=Eubacterium sp. CAG:603 RepID=R5P3X2_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1494_19
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23589..24368)
-----------------
DNA (780bp)
protein (260aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SA
rnhB; ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9II26_9FIRM
DolZOral124_scaffold_1494_20
[Clostridium] scindens, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24418..25263)
-----------------
DNA (846bp)
protein (282aa)
Ribosome biogenesis GTPase A n=2 Tax=Clostridiales RepID=B0ND00_CLOSV
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=411468 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] scindens ATCC 35704.;"
ribosome biogenesis GTP-binding protein YlqF
DolZOral124_scaffold_1494_21
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25263..25883)
-----------------
DNA (621bp)
protein (207aa)
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=5 Tax=Clostridiales RepID=A5KJ10_9FIRM
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1494_22
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26013..27041)
-----------------
DNA (1029bp)
protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A7 RepID=N9YNG7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ13503.1}; TaxID=999407 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A7.;"
oxidoreductase domain-containing protein
DolZOral124_scaffold_1494_23
Clostridium sp. CAG:62, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(27041..28321)
-----------------
DNA (1281bp)
protein (427aa)
Amidohydrolase n=1 Tax=Clostridium sp. CAG:62 RepID=R7C9F5_9CLOT
Amidohydrolase {ECO:0000313|EMBL:CDD74764.1}; TaxID=1262828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:
amidohydrolase
DolZOral124_scaffold_1494_24
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(28364..29512)
-----------------
DNA (1149bp)
protein (383aa)
UPI0003D62865 related cluster n=1 Tax=unknown RepID=UPI0003D62865
Basic membrane lipoprotein {ECO:0000313|EMBL:ETI69865.1}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
basic membrane lipoprotein
DolZOral124_scaffold_1494_25
Oribacterium parvum, Oribacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(29515..30021)
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein n=1 Tax=Oribacterium sp. ACB1 RepID=G9WQ47_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL09507.1}; TaxID=796943 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Oribacterium.;" source="Oribacterium parvum ACB1.;"
hypothetical protein
DolZOral124_scaffold_1494_26
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(30105..32294)
-----------------
DNA (2190bp)
protein (730aa)
1,4-alpha-glucan branching enzyme GlgB id=1743560 bin=GWE2_Clostridiales_32_10 species=Clostridium sp. ASF356 genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWE2_Clostridiales_32_10 organism_group=Clostridiales
1,4-alpha-glucan branching protein
Tax=BJP_IG2102_Clostridiales_34_350
DolZOral124_scaffold_1494_27
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(32449..35079)
-----------------
DNA (2631bp)
protein (877aa)
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YPN5_9FIRM rbh
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_1494_28
Lachnospiraceae bacterium A4, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(35177..36490)
-----------------
DNA (1314bp)
protein (438aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium A4 RepID=R9JQX4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS33572.1}; TaxID=397291 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium A4.;"
Cystathionine beta-lyase family protein involved in aluminum resistance
Displaying 28 items

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