ggKbase home page

DolZOral124_scaffold_1500

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1500_1
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..300)
-----------------
DNA (300bp)
protein (100aa)
Flagellin n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AX19_CLOA9
flagellin
Flagellin {ECO:0000313|EMBL:CDX03139.1}; TaxID=49338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense (Desulfitobact
DolZOral124_scaffold_1500_2
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

571..1407
-----------------
DNA (837bp)
protein (279aa)
Staphylococcus haemolyticus JCSC1435 DNA, complete genome n=1 Tax=Staphylococcus haemolyticus (strain JCSC1435) RepID=Q4L7J3_STAHJ
hypothetical protein
Staphylococcus haemolyticus JCSC1435 DNA, complete genome {ECO:0000313|EMBL:BAE04382.1}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemo
DolZOral124_scaffold_1500_3
unknown

Not on your lists

comp(1670..1813)
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

DolZOral124_scaffold_1500_4
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1813..2349)
-----------------
DNA (537bp)
protein (179aa)
Anaerobic ribonucleoside-triphosphate reductase-activating protein {ECO:0000256|PIRNR:PIRNR000368}; EC=1.97.1.- {ECO:0000256|PIRNR:PIRNR000368};; TaxID=1284708 species="Bacteria; Firmicutes; Clostridi
Anaerobic ribonucleoside-triphosphate reductase-activating protein n=2 Tax=unclassified Eubacteriaceae RepID=G9X357_9FIRM
anaerobic ribonucleoside-triphosphate reductase activating protein
DolZOral124_scaffold_1500_5
Megasphaera sp. UPII 135-E, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(2361..4637)
-----------------
DNA (2277bp)
protein (759aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EGS35611.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EGS35611.1};; TaxID=1000569 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales;
Anaerobic ribonucleoside-triphosphate reductase n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MN68_9FIRM
anaerobic ribonucleoside-triphosphate reductase
DolZOral124_scaffold_1500_6
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4914..6965)
-----------------
DNA (2052bp)
protein (684aa)
Dockerin type 1 n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VP16_CLOSH
dockerin type 1
Tax=BJP_IG2158_Thermincola_46_17
DolZOral124_scaffold_1500_7
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7245..7913)
-----------------
DNA (669bp)
protein (223aa)
Transcriptional regulator, Crp/Fnr family n=3 Tax=Desulfitobacterium hafniense RepID=B8FSD1_DESHD
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE84526.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium
DolZOral124_scaffold_1500_8
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8071..8406
-----------------
DNA (336bp)
protein (112aa)
Cupin domain protein n=1 Tax=Desulfitobacterium hafniense DP7 RepID=G9XMP7_DESHA
cyclic nucleotide-binding protein
Cupin domain protein {ECO:0000313|EMBL:EHL07077.1}; TaxID=537010 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium hafniense DP
DolZOral124_scaffold_1500_9
Pelosinus sp. UFO1, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8408..8770
-----------------
DNA (363bp)
protein (121aa)
Cupin 2, conserved barrel domain protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQU3_9FIRM
Cupin 2 conserved barrel domain protein
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:AIF50584.1}; TaxID=484770 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelosinus.;" source="Pelosinus sp. U
DolZOral124_scaffold_1500_10
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8824..10341)
-----------------
DNA (1518bp)
protein (506aa)
RNA helicase, DEAD-box type, Q motif {ECO:0000313|EMBL:CFX88809.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas
DEAD/DEAH box helicase id=3086169 bin=GWF2_Clostridiales_36_10 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Clostridiales_36_10 organism_group=Firmicute
DEAD/DEAH box helicase
DolZOral124_scaffold_1500_11
Planococcus halocryophilus, Planococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10338..11432)
-----------------
DNA (1095bp)
protein (365aa)
Putative uncharacterized protein n=1 Tax=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC 100599) RepID=C0ZIT3_BREBN
hypothetical protein
Low-specificity L-threonine aldolase {ECO:0000313|EMBL:EMF47535.1}; TaxID=1005941 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planococcus.;" source="Planococcus halocryophilus
DolZOral124_scaffold_1500_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11447..11977)
-----------------
DNA (531bp)
protein (177aa)
Hypoxanthine phosphoribosyltransferase n=2 Tax=Clostridiales RepID=B0A7A5_9FIRM
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:CDA10551.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sour
hypoxanthine phosphoribosyltransferase
DolZOral124_scaffold_1500_13
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12261..12890)
-----------------
DNA (630bp)
protein (210aa)
Metallo-beta-lactamase family protein n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G1K0_9FIRM
Hydrolase {ECO:0000313|EMBL:KHS57460.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
hydrolase
DolZOral124_scaffold_1500_14
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12906..15098)
-----------------
DNA (2193bp)
protein (731aa)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
(P)ppGpp synthetase I, SpoT/RelA {ECO:0000313|EMBL:ABW19254.1}; EC=2.7.6.5 {ECO:0000313|EMBL:ABW19254.1};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkali
(P)ppGpp synthetase I, SpoT/RelA n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MGN1_ALKOO
DolZOral124_scaffold_1500_15
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15114..16370)
-----------------
DNA (1257bp)
protein (419aa)
DNA-binding protein n=1 Tax=Turicibacter sanguinis PC909 RepID=D4W850_9FIRM
DNA-binding protein {ECO:0000313|EMBL:EFF62870.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sanguinis
DolZOral124_scaffold_1500_16
[Clostridium] hiranonis, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16363..17793)
-----------------
DNA (1431bp)
protein (477aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase n=1 Tax=Clostridium hiranonis DSM 13275 RepID=B6G0R4_9FIRM
adenylosuccinate lyase
DolZOral124_scaffold_1500_17
Peptostreptococcus anaerobius, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18413..19963)
-----------------
DNA (1551bp)
protein (517aa)
Ribonuclease Y {ECO:0000256|HAMAP-Rule:MF_00335}; Short=RNase Y {ECO:0000256|HAMAP-Rule:MF_00335};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00335};; TaxID=1035196 species="Bacteria; Firmicutes; Clostrid
Ribonuclease Y n=1 Tax=Peptostreptococcus anaerobius VPI 4330 RepID=L1MU90_9FIRM
hypothetical protein
DolZOral124_scaffold_1500_18
Anaerococcus hydrogenalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20380..21612
-----------------
DNA (1233bp)
protein (411aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=879306 species="Bacteria; Firmicutes; Clostri
DNA-directed DNA polymerase (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Anaerococcus hydrogenalis ACS-025-V-Sch4 RepID=F0H0I9_9FIRM
DolZOral124_scaffold_1500_19
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21705..22976)
-----------------
DNA (1272bp)
protein (424aa)
Glutamate dehydrogenase n=1 Tax=Clostridium ultunense Esp RepID=M1ZJZ1_9CLOT
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunense Esp.;"
NAD-specific glutamate dehydrogenase
DolZOral124_scaffold_1500_20
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23404..24054)
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Peptostreptococcaceae bacterium oral taxon 113 str. W5053 RepID=U2JJ10_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ERJ79820.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral tax
membrane protein
DolZOral124_scaffold_1500_21
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24075..24794)
-----------------
DNA (720bp)
protein (240aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JM29_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN38171.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
membrane protein
DolZOral124_scaffold_1500_22
Bacillus selenatarsenatis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24797..26122)
-----------------
DNA (1326bp)
protein (442aa)
Uncharacterized protein n=2 Tax=Bacillus RepID=U5LDC9_9BACI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAM13190.1}; TaxID=1321606 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus selenatarsenatis SF-1.;"
DolZOral124_scaffold_1500_23
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

Not on your lists

comp(26158..26961)
-----------------
DNA (804bp)
protein (268aa)
Putative uncharacterized protein id=1741115 bin=GWD2_Clostridiales_32_19 species=butyrate-producing bacterium SS3/4 genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
conserved hypothetical protein TIGR00726 Tax=GWD2_Clostridiales_32_19_curated
hypothetical protein
DolZOral124_scaffold_1500_24
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26961..28562)
-----------------
DNA (1602bp)
protein (534aa)
CTP synthase {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037303}; EC=6.3.4.2 {ECO:0000256|HAMAP-Rule:MF_01227, ECO:0000256|SAAS:SAAS00037401};; CTP synthetase {ECO:0000256|HAMAP-Rule:MF_0
CTP synthase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AX44_9CLOT
CTP synthase
DolZOral124_scaffold_1500_25
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28712..30802)
-----------------
DNA (2091bp)
protein (697aa)
Uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=U6Q2N9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EJZ44302.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM2.;"
methyl-accepting chemotaxis sensory transducer
DolZOral124_scaffold_1500_26
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31055..31663
-----------------
DNA (609bp)
protein (203aa)
Putative uncharacterized protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PV82_CLOSD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH22535.1}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sticklandii
DolZOral124_scaffold_1500_27
Clostridium sp. L2-50, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31734..32975)
-----------------
DNA (1242bp)
protein (414aa)
Uncharacterized protein n=1 Tax=Clostridium sp. L2-50 RepID=A7VFY1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDO57407.1}; TaxID=411489 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. L2-50.;"
DolZOral124_scaffold_1500_28
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33006..33572)
-----------------
DNA (567bp)
protein (189aa)
Uncharacterized protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GEA9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEG78403.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT
hypothetical protein
DolZOral124_scaffold_1500_29
Paenibacillus sp. HGF7, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

33756..34775
-----------------
DNA (1020bp)
protein (340aa)
M42 glutamyl aminopeptidase n=2 Tax=Paenibacillus RepID=F5LF09_9BACL rbh
M42 glutamyl aminopeptidase {ECO:0000313|EMBL:EGL19035.1}; TaxID=944559 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. HGF7.;"
aminopeptidase
DolZOral124_scaffold_1500_30
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35396..36796)
-----------------
DNA (1401bp)
protein (467aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI00031012F5
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:ABR50310.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (s
Displaying 30 items

View Taxonomy