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DolZOral124_scaffold_1504

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1504_1
unknown

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comp(3..485)
-----------------
DNA (483bp)
protein (161aa)

This feature has no annotations

DolZOral124_scaffold_1504_2
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1220..7363)
-----------------
DNA (6144bp)
protein (2048aa)
Uncharacterized protein n=1 Tax=Prevotella marshii DSM 16973 RepID=E0NRC9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KGN82658.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
Por secretion system C-terminal sorting domain protein
DolZOral124_scaffold_1504_3
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(7513..8286)
-----------------
DNA (774bp)
protein (258aa)
Exonuclease family protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NEQ7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84457.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
exonuclease
DolZOral124_scaffold_1504_4
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8306..8956)
-----------------
DNA (651bp)
protein (217aa)
Uncharacterized protein n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NH16_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84419.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_1504_5
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8946..10952)
-----------------
DNA (2007bp)
protein (669aa)
Arylsulfatase n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NAF3_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN84865.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
phosphoglycerol transferase family protein, alkaline phosphatase superfamily
DolZOral124_scaffold_1504_6
Porphyromonas catoniae, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10968..13883)
-----------------
DNA (2916bp)
protein (972aa)
DNA-directed RNA polymerase, omega subunit n=1 Tax=Porphyromonas catoniae F0037 RepID=L1NH67_9PORP
DNA-directed RNA polymerase, omega subunit {ECO:0000313|EMBL:EKY02620.1}; TaxID=1127696 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porph
DNA translocase FtsK
DolZOral124_scaffold_1504_7
Capnocytophaga cynodegmi, Capnocytophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(14791..16317)
-----------------
DNA (1527bp)
protein (509aa)
Polymyxin resistance protein pmrC {ECO:0000313|EMBL:CEN35490.1}; EC=2.7.-.- {ECO:0000313|EMBL:CEN35490.1};; TaxID=28189 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteri
sulfatase n=1 Tax=Capnocytophaga cynodegmi RepID=UPI00037482E8
putative membrane-associated, metal-dependent hydrolase
DolZOral124_scaffold_1504_8
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(16290..17120)
-----------------
DNA (831bp)
protein (277aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1LMJ3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB58095.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum AT
hypothetical protein
DolZOral124_scaffold_1504_9
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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17342..19201
-----------------
DNA (1860bp)
protein (620aa)
Methylmalonyl-CoA mutase, small subunit n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2K5Q2_9PORP
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:KGN85166.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-2
mutA; methylmalonyl-CoA mutase small subunit
DolZOral124_scaffold_1504_10
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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19210..21363
-----------------
DNA (2154bp)
protein (718aa)
mutB; methylmalonyl-CoA mutase (EC:5.4.99.2)
Methylmalonyl-CoA mutase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2JZ64_9PORP
Methylmalonyl-CoA mutase {ECO:0000313|EMBL:ERJ70194.1}; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. oral
DolZOral124_scaffold_1504_11
Dokdonia sp. 4H-3-7-5, Dokdonia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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21469..22851
-----------------
DNA (1383bp)
protein (461aa)
Uncharacterized protein n=1 Tax=Krokinobacter sp. (strain 4H-3-7-5) RepID=F4B041_KROS4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEE20294.1}; TaxID=983548 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Dokdonia.;" source="Dokdonia sp. (strain 4H-3
DolZOral124_scaffold_1504_12
Ornithobacterium rhinotracheale, Ornithobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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23625..24509
-----------------
DNA (885bp)
protein (295aa)
Small-conductance mechanosensitive channel n=1 Tax=Ornithobacterium rhinotracheale (strain ATCC 51463 / DSM 15997 / CCUG 23171 / LMG 9086) RepID=I3ZXD2_ORNRL
hypothetical protein
Small-conductance mechanosensitive channel {ECO:0000313|EMBL:AFL96366.1}; TaxID=867902 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Ornithobacterium.;" source
DolZOral124_scaffold_1504_13
Porphyromonas sp. COT-239 OH1446, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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24594..25529
-----------------
DNA (936bp)
protein (312aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086366}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GUP9_9PORP
dapA; dihydrodipicolinate synthase
DolZOral124_scaffold_1504_14
Porphyromonas sp. oral taxon 278, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25533..25739
-----------------
DNA (207bp)
protein (69aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00198686};; TaxID=1227272 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyro
Putative exodeoxyribonuclease VII, small subunit n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2ICD8_9PORP
hypothetical protein
DolZOral124_scaffold_1504_15
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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25751..26437
-----------------
DNA (687bp)
protein (229aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IVK0_9PORP
ispD; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
DolZOral124_scaffold_1504_trna_1
unknown

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26542..26615
-----------------
DNA (74bp)
transferRNA
DolZOral124_scaffold_1504_16
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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26856..30500
-----------------
DNA (3645bp)
protein (1215aa)
Uncharacterized protein n=1 Tax=Porphyromonas endodontalis ATCC 35406 RepID=C3JBB2_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KGN82767.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
hypothetical protein
DolZOral124_scaffold_1504_17
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(30532..31671)
-----------------
DNA (1140bp)
protein (380aa)
Glycosyl transferase, group 1 family protein n=1 Tax=Porphyromonas gingivalis (strain TDC60) RepID=F5XA97_PORGT
Uncharacterized protein {ECO:0000313|EMBL:KGN85033.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. COT-29
glycoside hydrolase family protein
DolZOral124_scaffold_1504_18
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(31675..33108)
-----------------
DNA (1434bp)
protein (478aa)
RNA polymerase sigma-54 factor n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 RepID=U2IWZ6_9PORP
RNA polymerase sigma54 factor {ECO:0000313|EMBL:KGN84251.1}; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp.
rpoN; RNA polymerase sigma-54 factor
DolZOral124_scaffold_1504_19
Bacteroides sp. 2_2_4, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(33131..34051)
-----------------
DNA (921bp)
protein (307aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_2_4 RepID=C3QYU7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EEO57131.1}; TaxID=469590 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_2_4.;"
hypothetical protein
DolZOral124_scaffold_1504_20
Prevotella sp. S7 MS 2, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(34057..35085)
-----------------
DNA (1029bp)
protein (343aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:90 RepID=R7GQI8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI61071.1}; TaxID=1287488 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella.;" source="Prevotella sp. S7 MS 2.;"
DolZOral124_scaffold_1504_21
Porphyromonas sp. COT-290 OH860, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(35116..36429)
-----------------
DNA (1314bp)
protein (438aa)
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase {ECO:0000256|RuleBase:RU004136}; EC=6.3.2.10 {ECO:0000256|RuleBase:RU004136};; TaxID=1515615 species="Bacteria; Bacteroidetes; Bacteroidia; B
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase n=1 Tax=Porphyromonas sp. oral taxon 279 str. F0450 RepID=J6GY07_9PORP rbh
murF; UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate--D-alanyl-D-alanine ligase
Displaying 22 items

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