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DolZOral124_scaffold_1531

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1531_1
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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44..604
-----------------
DNA (561bp)
protein (187aa)
Protein GrpE n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6FJD4_9FIRM
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaeroba
grpE; nucleotide exchange factor GrpE
DolZOral124_scaffold_1531_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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615..2462
-----------------
DNA (1848bp)
protein (616aa)
Chaperone protein DnaK n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CPI9_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
dnaK; chaperone protein DnaK
DolZOral124_scaffold_1531_3
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2634..3785
-----------------
DNA (1152bp)
protein (384aa)
molecular chaperone DnaJ n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2C1E6
chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlandii (strain
DolZOral124_scaffold_1531_4
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3947..6448
-----------------
DNA (2502bp)
protein (834aa)
Putative ABC transporter permease protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B0S0_CLOA9
ABC transporter permease
Putative ABC transporter permease protein {ECO:0000313|EMBL:AFS79119.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain A
DolZOral124_scaffold_1531_5
Clostridium acetobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6457..7170
-----------------
DNA (714bp)
protein (238aa)
ABC transporter ATP-binding protein n=1 Tax=Dehalobacter sp. E1 RepID=UPI0002FE29D4
ABC transporter ATPase
ABC-type transporter, ATPase component {ECO:0000313|EMBL:AAK81484.1}; TaxID=272562 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium acetobut
DolZOral124_scaffold_1531_6
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7157..8155
-----------------
DNA (999bp)
protein (333aa)
Secretion protein, HlyD family n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0B1X5_CLOA9
HlyD family secretion protein
Secretion protein, HlyD family {ECO:0000313|EMBL:AFS79117.1}; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gottschalkia.;" source="Clostridium acidurici (strain ATCC 7906 /
DolZOral124_scaffold_1531_7
unknown

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comp(8117..8437)
-----------------
DNA (321bp)
protein (107aa)

This feature has no annotations

DolZOral124_scaffold_1531_8
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8669..10453)
-----------------
DNA (1785bp)
protein (595aa)
L-fucose isomerase {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SAAS00040911}; Short=FucIase {ECO:0000256|HAMAP-Rule:MF_01254};; EC=5.3.1.25 {ECO:0000256|HAMAP-Rule:MF_01254, ECO:0000256|SAAS:SA
L-fucose isomerase (EC:5.3.1.25)
L-fucose isomerase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDQ6_9CLOT
DolZOral124_scaffold_1531_9
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10450..11928)
-----------------
DNA (1479bp)
protein (493aa)
Sugar (pentulose and hexulose) kinases (EC:2.7.1.5 2.7.1.51)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:413 RepID=R6PK23_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC10102.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
DolZOral124_scaffold_1531_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12279..13769
-----------------
DNA (1491bp)
protein (497aa)
Putative ribose transport ATP-binding protein rbsa n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLA6_9CLOT
Putative ribose transport ATP-binding protein rbsa {ECO:0000313|EMBL:EKY28726.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
ABC transporter
DolZOral124_scaffold_1531_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13779..14768
-----------------
DNA (990bp)
protein (330aa)
Putative ribose transport system permease protein RbsC n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QLY6_9CLOT
Putative ribose transport system permease protein RbsC {ECO:0000313|EMBL:EKY28725.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
permease component of ribose/xylose/arabinose/galactoside ABC-type transporters
DolZOral124_scaffold_1531_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14819..16003
-----------------
DNA (1185bp)
protein (395aa)
Sugar-binding domain protein n=1 Tax=Clostridium celatum DSM 1785 RepID=L1QL54_9CLOT
Sugar-binding domain protein {ECO:0000313|EMBL:EKY28724.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;
periplasmic binding protein/LacI transcriptional regulator
DolZOral124_scaffold_1531_13
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16096..16848)
-----------------
DNA (753bp)
protein (251aa)
Transcriptional regulator, DeoR family n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E8C3_9CLOT
Transcriptional regulator, DeoR family {ECO:0000313|EMBL:EEG32288.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium]
DeoR family transcriptional regulator
DolZOral124_scaffold_1531_14
Clostridium leptum CAG:27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16929..17894
-----------------
DNA (966bp)
protein (322aa)
Sugar kinases, ribokinase family (EC:2.7.1.4)
Kinase PfkB family n=1 Tax=Clostridium leptum CAG:27 RepID=R6MYD7_9CLOT
Kinase PfkB family {ECO:0000313|EMBL:CDC04763.1}; TaxID=1263068 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium lept
DolZOral124_scaffold_1531_15
Anaerofustis stercorihominis, Anaerofustis, Clostridiales, Clostridia, Firmicutes, Bacteria

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18065..19330
-----------------
DNA (1266bp)
protein (422aa)
pdhC; dihydrolipoamide acetyltransferase (EC:2.3.1.12)
2-oxo acid dehydrogenase acyltransferase (Catalytic domain) n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1CB02_9FIRM
2-oxo acid dehydrogenase acyltransferase (Catalytic domain) {ECO:0000313|EMBL:EDS71449.1}; TaxID=445971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Anaerofustis.;" source
DolZOral124_scaffold_1531_16
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19335..20708
-----------------
DNA (1374bp)
protein (458aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubact
lpdA; dihydrolipoyl dehydrogenase LpdA (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7FZ65_9FIRM rbh
DolZOral124_scaffold_1531_17
BJP_IG2157_Clostridiales_52_13, Dethiosulfatibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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20710..23175
-----------------
DNA (2466bp)
protein (822aa)
Putative pyruvate dehydrogenase E1 component alpha subunit/beta subunit n=1 Tax=Oscillibacter valericigenes (strain DSM 18026 / NBRC 101213 / Sjm18-20) RepID=G4KR75_OSCVS
putative pyruvate dehydrogenase E1 component alpha subunit/beta subunit
Tax=BJP_IG2157_Clostridiales_52_13
DolZOral124_scaffold_1531_18
Eubacterium sp. CAG:841, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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23185..24450
-----------------
DNA (1266bp)
protein (422aa)
Theronine dehydrogenase-like Zn-dependent dehydrogenase n=1 Tax=Eubacterium sp. CAG:841 RepID=R7G1L3_9FIRM
Theronine dehydrogenase-like Zn-dependent dehydrogenase {ECO:0000313|EMBL:CDE19872.1}; TaxID=1262894 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmenta
alcohol dehydrogenase, zinc-binding domain-containing protein
DolZOral124_scaffold_1531_19
Firmicutes bacterium CAG:170, Firmicutes, Bacteria

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24452..25330
-----------------
DNA (879bp)
protein (293aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:170 RepID=R6LUZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB87464.1}; TaxID=1263006 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:170.;"
hypothetical protein
DolZOral124_scaffold_1531_20
Caldicellulosiruptor bescii, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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25340..26491
-----------------
DNA (1152bp)
protein (384aa)
Uncharacterized protein n=1 Tax=Caldicellulosiruptor bescii (strain ATCC BAA-1888 / DSM 6725 / Z-1320) RepID=B9MQ20_CALBD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM59812.1}; TaxID=521460 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicellulosi
DolZOral124_scaffold_1531_21
Ruminococcus callidus, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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26494..26919
-----------------
DNA (426bp)
protein (142aa)
Putative L-fucose mutarotase n=1 Tax=Ruminococcus callidus ATCC 27760 RepID=U2M3U0_9FIRM
Putative L-fucose mutarotase {ECO:0000313|EMBL:ERJ96419.1}; TaxID=411473 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus.;" source="Ruminococcus callidus ATCC 2
transporter
DolZOral124_scaffold_1531_22
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27113..28114
-----------------
DNA (1002bp)
protein (334aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asnA; asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=2 Tax=Clostridium botulinum RepID=C3KVD9_CLOB6
DolZOral124_scaffold_1531_23
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28338..30020
-----------------
DNA (1683bp)
protein (561aa)
Diguanylate cyclase (GGDEF) domain protein n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QJ34_9FIRM
Diguanylate cyclase (GGDEF) domain protein {ECO:0000313|EMBL:EFM39284.1}; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Eub
FOG: GGDEF domain
DolZOral124_scaffold_1531_24
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

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30010..31674
-----------------
DNA (1665bp)
protein (555aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9X9S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL20171.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
putative sensory box/ggdef family protein
DolZOral124_scaffold_1531_25
Firmicutes bacterium CAG:41, Firmicutes, Bacteria

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31916..32590
-----------------
DNA (675bp)
protein (225aa)
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain n=1 Tax=Firmicutes bacterium CAG:41 RepID=R6NCH7_9FIRM
Response regulator with CheY-like receiver domain and winged-helix DNA-binding domain {ECO:0000313|EMBL:CDB95567.1}; TaxID=1263021 species="Bacteria; Firmicutes; environmental samples.;" source="Firmi
winged helix family two component transcriptional regulator
DolZOral124_scaffold_1531_26
Lachnospiraceae bacterium 3_1_57FAA_CT1, Clostridiales, Clostridia, Firmicutes, Bacteria

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32599..34029
-----------------
DNA (1431bp)
protein (477aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=658086 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachno
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3_1_57FAA_CT1 RepID=F7KG66_9FIRM
periplasmic sensor signal transduction histidine kinase
DolZOral124_scaffold_1531_27
Clostridium scatologenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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34180..34641
-----------------
DNA (462bp)
protein (154aa)
Small heat shock protein, putative n=1 Tax=Clostridium novyi (strain NT) RepID=A0PX96_CLONN
heat shock protein Hsp20
Heat shock protein Hsp20 {ECO:0000313|EMBL:AKA71277.1}; TaxID=1548 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium scatologenes.;"
DolZOral124_scaffold_1531_28
GWD2_Clostridiales_32_19_curated, Clostridiales, Bacteria

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34652..35938
-----------------
DNA (1287bp)
protein (429aa)
2-alkenal reductase id=1907002 bin=GWD2_Clostridiales_32_19 species=Epulopiscium sp. 'N.t. morphotype B' genus=Epulopiscium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWD2_Clostridiales_32_19 organism_group=Firmicute organism_desc=a85
protease Tax=GWD2_Clostridiales_32_19_curated
hypothetical protein
DolZOral124_scaffold_1531_29
unknown

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36139..36294
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

Displaying 29 items

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