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DolZOral124_scaffold_1533

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1533_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..338)
-----------------
DNA (336bp)
protein (112aa)
Response regulator receiver domain protein n=8 Tax=Clostridium difficile RepID=G6B6P5_CLODI
two-component system response regulator
Two-component response regulator {ECO:0000313|EMBL:CCL29031.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
DolZOral124_scaffold_1533_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(544..1185)
-----------------
DNA (642bp)
protein (214aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
deoC; deoxyribose-phosphate aldolase DeoC (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CMD6_9CLOT
DolZOral124_scaffold_1533_3
Lysinibacillus massiliensis, Lysinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1211..2479)
-----------------
DNA (1269bp)
protein (423aa)
GTP-binding protein n=1 Tax=Ureibacillus thermosphaericus RepID=UPI0002E170E4 rbh
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1211035 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Lysinibacillus
GTP-binding protein hflX
DolZOral124_scaffold_1533_4
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2626..5982
-----------------
DNA (3357bp)
protein (1119aa)
Transglycosylase {ECO:0000313|EMBL:EEU12422.1}; EC=2.4.2.- {ECO:0000313|EMBL:EEU12422.1};; EC=3.4.-.- {ECO:0000313|EMBL:EEU12422.1};; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridia
Transglycosylase n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HUX3_9FIRM rbh
1A family penicillin-binding protein
DolZOral124_scaffold_1533_5
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6009..7784)
-----------------
DNA (1776bp)
protein (592aa)
Uncharacterized protein n=1 Tax=Caldisericum exile (strain DSM 21853 / NBRC 104410 / AZM16c01) RepID=I0GI20_CALEA
hypothetical protein
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_1533_6
Lachnoanaerobaculum saburreum, Lachnoanaerobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7905..9647)
-----------------
DNA (1743bp)
protein (581aa)
ABC transporter (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=1 Tax=Lachnoanaerobaculum saburreum DSM 3986 RepID=E6LLQ1_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFU77273.1}; TaxID=887325 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Lachnoanaerobaculum.;" source="Lachnoanaerob
DolZOral124_scaffold_1533_7
Stomatobaculum longum, Stomatobaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9649..11532)
-----------------
DNA (1884bp)
protein (628aa)
Uncharacterized protein n=1 Tax=Stomatobaculum longum RepID=H1HW88_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO15956.1}; TaxID=796942 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Stomatobaculum.;" source="Stomatobaculum longum.;"
ABC transporter ATP-binding protein/permease
DolZOral124_scaffold_1533_8
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11525..12175)
-----------------
DNA (651bp)
protein (217aa)
Transcriptional regulator, TetR family n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Y349_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ESL02492.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC
Transcriptional regulator
DolZOral124_scaffold_1533_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12291..12698)
-----------------
DNA (408bp)
protein (136aa)
CAAX amino terminal protease family protein n=8 Tax=Clostridium difficile RepID=G6B6P2_CLODI
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFH08290.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
membrane spanning protein
DolZOral124_scaffold_1533_10
unknown

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comp(12700..13257)
-----------------
DNA (558bp)
protein (186aa)

This feature has no annotations

DolZOral124_scaffold_1533_11
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13342..13632)
-----------------
DNA (291bp)
protein (97aa)
Stress responsive alpha-beta barrel domain-containing protein n=1 Tax=Methanococcus maripaludis X1 RepID=G0H014_METMI
hypothetical protein
Stress responsive A/B barrel domain protein {ECO:0000313|EMBL:EKY26877.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cel
DolZOral124_scaffold_1533_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13635..14345)
-----------------
DNA (711bp)
protein (237aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
peptidyl-prolyl cis-trans isomerase n=1 Tax=Clostridium sp. JC122 RepID=UPI000289EF1A
cyclophilin type peptidyl-prolyl cis-trans isomerase
DolZOral124_scaffold_1533_13
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14345..15277)
-----------------
DNA (933bp)
protein (311aa)
D-3-phosphoglycerate dehydrogenase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RV23_9CLOT rbh
D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain protein {ECO:0000313|EMBL:KIE45772.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding
DolZOral124_scaffold_1533_14
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15274..15861)
-----------------
DNA (588bp)
protein (196aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=1413510 species="Bacteria; F
Dephospho-CoA kinase n=1 Tax=Macrococcus caseolyticus (strain JCSC5402) RepID=B9E794_MACCJ
coaE; dephospho-CoA kinase
DolZOral124_scaffold_1533_15
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15848..18469)
-----------------
DNA (2622bp)
protein (874aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ARS6_9CLOT rbh
DolZOral124_scaffold_1533_16
Mycoplasma sp. CAG:472, Mycoplasma, Mycoplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

comp(18478..18669)
-----------------
DNA (192bp)
protein (64aa)
Uncharacterized protein n=1 Tax=Mycoplasma sp. CAG:472 RepID=R7HIW1_9MOLU
Uncharacterized protein {ECO:0000313|EMBL:CDE38182.1}; TaxID=1262904 species="Bacteria; Tenericutes; Mollicutes; Mycoplasmataceae; Mycoplasma; environmental samples.;" source="Mycoplasma sp. CAG:472.;
Putative stress-responsive transcriptional regulator
DolZOral124_scaffold_1533_17
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18713..19624)
-----------------
DNA (912bp)
protein (304aa)
Radical SAM domain protein n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A1J4_NATTJ
Methyltransferase {ECO:0000313|EMBL:KGK87591.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
radical SAM protein
DolZOral124_scaffold_1533_18
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19625..20341)
-----------------
DNA (717bp)
protein (239aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TM80_ALKMQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR47298.1}; Flags: Precursor;; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus me
DolZOral124_scaffold_1533_19
BJP_IG2158_Thermincola_46_17, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20352..25274)
-----------------
DNA (4923bp)
protein (1641aa)
Large extracellular alpha-helical protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LSD0_CLOCD rbh
large extracellular alpha-helical protein
Tax=BJP_IG2158_Thermincola_46_17
DolZOral124_scaffold_1533_20
[Clostridium] straminisolvens, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25255..25821)
-----------------
DNA (567bp)
protein (189aa)
RNA polymerase subunit sigma-24 n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0002481CA1
RNA polymerase sigma-E factor {ECO:0000313|EMBL:GAE89089.1}; TaxID=1294263 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] stramin
RNA polymerase, sigma-24 subunit, RpoE
DolZOral124_scaffold_1533_21
Parvimonas micra, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25938..27209)
-----------------
DNA (1272bp)
protein (424aa)
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SIG8_9FIRM
Transporter, dicarboxylate/amino acid:cation Na+/H+ symporter family protein {ECO:0000313|EMBL:EDP24661.1}; TaxID=411465 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Par
sodium:dicarboxylate symporter
DolZOral124_scaffold_1533_22
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27462..29603
-----------------
DNA (2142bp)
protein (714aa)
Methyl-accepting chemotaxis protein signaling domain protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2XP06_9FIRM
Methyl-accepting chemotaxis protein signaling domain protein {ECO:0000313|EMBL:ESL03914.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source=
methyl-accepting chemotaxis sensory transducer
DolZOral124_scaffold_1533_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29619..30590)
-----------------
DNA (972bp)
protein (324aa)
Methyltransferase, MtaA/CmuA family {ECO:0000313|EMBL:EFH15820.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFH15820.1};; TaxID=525258 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
Methyltransferase, MtaA/CmuA family n=6 Tax=Clostridium difficile RepID=D5Q526_CLODI
methyltransferase
DolZOral124_scaffold_1533_24
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30591..31754)
-----------------
DNA (1164bp)
protein (388aa)
Probable tRNA sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_00021}; EC=2.8.1.4 {ECO:0000255|HAMAP-Rule:MF_00021};; Sulfur carrier protein ThiS sulfurtransferase {ECO:0000255|HAMAP-Rule:MF_00021}; Thiam
Probable tRNA sulfurtransferase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=THII_ALKMQ
thiamine biosynthesis protein ThiI
DolZOral124_scaffold_1533_25
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31756..32898)
-----------------
DNA (1143bp)
protein (381aa)
Aminotransferase class V n=1 Tax=Thermoanaerobacterium saccharolyticum (strain DSM 8691 / JW/SL-YS485) RepID=I3VVL6_THESW
Cysteine desulfurase {ECO:0000313|EMBL:KGG79767.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53
class V aminotransferase
DolZOral124_scaffold_1533_26
unknown

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comp(33437..33598)
-----------------
DNA (162bp)
protein (54aa)

This feature has no annotations

DolZOral124_scaffold_1533_27
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33638..34630
-----------------
DNA (993bp)
protein (331aa)
L-asparaginase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCA8_9CLOT rbh
Asparaginase {ECO:0000313|EMBL:KGG79766.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
ansA; L-asparaginase
DolZOral124_scaffold_1533_28
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34623..35570
-----------------
DNA (948bp)
protein (316aa)
Putative 3'-5' exonuclease related to the exonuclease domain of PolB family protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VUI2_CLOBI
Putative 3'-5' exonuclease related to the exonuclease domain of PolB family protein {ECO:0000313|EMBL:EQK44765.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoc
hypothetical protein
DolZOral124_scaffold_1533_trna_7
unknown

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comp(35622..35694)
-----------------
DNA (73bp)
transferRNA
DolZOral124_scaffold_1533_trna_6
unknown

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comp(35704..35777)
-----------------
DNA (74bp)
transferRNA
Displaying items 1-30 of 35 in total

View Taxonomy